Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027559

Identifier: 238027559

GI number: 238027559

Start: 2161910

End: 2162926

Strand: Reverse

Name: 238027559

Synonym: bglu_1g19770

Alternate gene names: NA

Gene position: 2162926-2161910 (Counterclockwise)

Preceding gene: 238027560

Following gene: 238027558

Centisome position: 55.37

GC content: 73.06

Gene sequence:

>1017_bases
ATGTCTAGCGGCGTGCTGTGGGCGCTGTCGTTCGCGCTGCTGCTGGCCGCGGCCGGCGTGATGCTGTGGCGCGGCAGCCA
GTTGCGCGAGCAGAGCGCCCATACGCGGCGCTTCTTCGACAGTCGCCTGGAGGCGGGCGCGAAGGGGGCCGTGCCGGCGG
GCGCGGCAGGCGGCGCGGGTCGCACAGCCGCGCGCCAGGCGGCGCCGGCGGCGGGGCAGCCGGCCAGGCCGGCGAGCCGG
CCGGCGGCGCCCGCGAAGGGGCTGGCGGCGTGGCGCGCCAAGGCCGAGGCGCGCTGGCTCGGCATCAGCGATCGCGCCGG
CCTCGACGAGGTGCGGGGCTTGCTCTACGTGCTGGCGGGGCTGGTGTTGCTGGCCATGCTGGTGGCCGGCGCGCGCGGCG
GCGGGGTGGCGGCCGGCGCGGCCCTGCTCGGCGGCGTGGCGCTCGCCTGCCTGTGGGTGCTGCGGCGGATCTCGGCGCGG
CGCCTGAAGATCGTCCAGCAGCTGCCGTCGTTCCTCGACGGCGTGGTACGGCTGGTGACGCTCGGCAACAGCGTGCCGGC
CGCGTTCCAGGGCGCGCTCGGCACCACCGAGATGCCGCTGCGCCGCTGCCTCGACCAGGTATCGAGAATGCTGCGCACCG
GCGTGGAGATCGATCGCGCGATGCTGCACATCGCCAAGGAATACCGCGTTCGCGAGTTCGAGCTGGTGGGATCGGTGCTG
CGCCTGTCGGTCAAGTACGGCGGCCGTGCCGACGTGATGCTGGAGCGCATGGCGACCTTCATGCGCGACCTCGAGCAGGC
CGAGCGCGAACTGCACGCGATGTCGGCGGAGACGCGCCTGTCGGCCTGGGTGCTCGGCCTGCTGCCGGTCGCGGTCGGCA
GCTTCGTGGTATCGACCAATCCGCAGTATTTCACGGCGATGTGGATGAACGAATCCGGGCGCCTGGTGCTGTACGTGGCC
TTCGGCCTGCAGATGCTCGGCGGCTATCTGCTGTACCGGATGGCTCGGCTCAGGTAG

Upstream 100 bases:

>100_bases
GGCATCCACCCGCATTCGCCCAAGCTCGCGCGGTTTCGCAATGAGCTGATCGGCAGCCTGGGCGGCGGCATGGACGGCTT
CGGCTGCGGCGAGGGCTTCA

Downstream 100 bases:

>100_bases
GGAGGCGCAATGGAGGCACATCAACTGGGCGCGCTGGCGCTGGCGTTGGGGGCGATCGGCGTGCTGCTGCTGGCCGGCCT
GGCGATCGTGCGCGCCATGC

Product: Flp pilus assembly protein TadB

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Tight Adherence TadB Related Transmembrane Protein; TadB Protein; Flp Type Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein Tadb; Type II/IV Secretion System Membrane Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSSGVLWALSFALLLAAAGVMLWRGSQLREQSAHTRRFFDSRLEAGAKGAVPAGAAGGAGRTAARQAAPAAGQPARPASR
PAAPAKGLAAWRAKAEARWLGISDRAGLDEVRGLLYVLAGLVLLAMLVAGARGGGVAAGAALLGGVALACLWVLRRISAR
RLKIVQQLPSFLDGVVRLVTLGNSVPAAFQGALGTTEMPLRRCLDQVSRMLRTGVEIDRAMLHIAKEYRVREFELVGSVL
RLSVKYGGRADVMLERMATFMRDLEQAERELHAMSAETRLSAWVLGLLPVAVGSFVVSTNPQYFTAMWMNESGRLVLYVA
FGLQMLGGYLLYRMARLR

Sequences:

>Translated_338_residues
MSSGVLWALSFALLLAAAGVMLWRGSQLREQSAHTRRFFDSRLEAGAKGAVPAGAAGGAGRTAARQAAPAAGQPARPASR
PAAPAKGLAAWRAKAEARWLGISDRAGLDEVRGLLYVLAGLVLLAMLVAGARGGGVAAGAALLGGVALACLWVLRRISAR
RLKIVQQLPSFLDGVVRLVTLGNSVPAAFQGALGTTEMPLRRCLDQVSRMLRTGVEIDRAMLHIAKEYRVREFELVGSVL
RLSVKYGGRADVMLERMATFMRDLEQAERELHAMSAETRLSAWVLGLLPVAVGSFVVSTNPQYFTAMWMNESGRLVLYVA
FGLQMLGGYLLYRMARLR
>Mature_337_residues
SSGVLWALSFALLLAAAGVMLWRGSQLREQSAHTRRFFDSRLEAGAKGAVPAGAAGGAGRTAARQAAPAAGQPARPASRP
AAPAKGLAAWRAKAEARWLGISDRAGLDEVRGLLYVLAGLVLLAMLVAGARGGGVAAGAALLGGVALACLWVLRRISARR
LKIVQQLPSFLDGVVRLVTLGNSVPAAFQGALGTTEMPLRRCLDQVSRMLRTGVEIDRAMLHIAKEYRVREFELVGSVLR
LSVKYGGRADVMLERMATFMRDLEQAERELHAMSAETRLSAWVLGLLPVAVGSFVVSTNPQYFTAMWMNESGRLVLYVAF
GLQMLGGYLLYRMARLR

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36258; Mature: 36127

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGVLWALSFALLLAAAGVMLWRGSQLREQSAHTRRFFDSRLEAGAKGAVPAGAAGGAG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RTAARQAAPAAGQPARPASRPAAPAKGLAAWRAKAEARWLGISDRAGLDEVRGLLYVLAG
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LVLLAMLVAGARGGGVAAGAALLGGVALACLWVLRRISARRLKIVQQLPSFLDGVVRLVT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNSVPAAFQGALGTTEMPLRRCLDQVSRMLRTGVEIDRAMLHIAKEYRVREFELVGSVL
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLSVKYGGRADVMLERMATFMRDLEQAERELHAMSAETRLSAWVLGLLPVAVGSFVVSTN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PQYFTAMWMNESGRLVLYVAFGLQMLGGYLLYRMARLR
CCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSGVLWALSFALLLAAAGVMLWRGSQLREQSAHTRRFFDSRLEAGAKGAVPAGAAGGAG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RTAARQAAPAAGQPARPASRPAAPAKGLAAWRAKAEARWLGISDRAGLDEVRGLLYVLAG
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LVLLAMLVAGARGGGVAAGAALLGGVALACLWVLRRISARRLKIVQQLPSFLDGVVRLVT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGNSVPAAFQGALGTTEMPLRRCLDQVSRMLRTGVEIDRAMLHIAKEYRVREFELVGSVL
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLSVKYGGRADVMLERMATFMRDLEQAERELHAMSAETRLSAWVLGLLPVAVGSFVVSTN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PQYFTAMWMNESGRLVLYVAFGLQMLGGYLLYRMARLR
CCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA