The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027557

Identifier: 238027557

GI number: 238027557

Start: 2160019

End: 2160873

Strand: Reverse

Name: 238027557

Synonym: bglu_1g19750

Alternate gene names: NA

Gene position: 2160873-2160019 (Counterclockwise)

Preceding gene: 238027558

Following gene: 238027556

Centisome position: 55.31

GC content: 72.28

Gene sequence:

>855_bases
ATGAAACGATCGAAGGGACGCACCATGCTGGCCGGCCTGCTCGTCGCCGGGCTGGCGAGCGGCTGCTCGCTGTTCAAGGA
TTCGAACTACGGGGTCGGCGCGCAGGCCGAGCGGGCCGCGATGATCCAGGCCGCGGCGGACAAGGTCGATCCGCCCGATA
CGCCGGGCATGTACCTGGGCCTGATCGACCGCATGCAGCAGCAGGGGCTGTACTACGCCTCGCTCGCGCATATCGACGAG
TACGAGAAGCAGTACGGCGCCTCCGCCGACACCCGGCTGCTGCGCGCCGACGCGCTGCGTGCCACCTCGCAGCTCGACGC
GAGCGAGCAGGCCTACACGCAGCTGCTGAACACGCCGCTGGCGGCGCGCGGCTATCGCGGCCTCGGCCTGATCGCGGGCG
CGCGCGGCGACTTCGCGCGTGCCGCGAAGCTGTTGGAGCAGGCCACGCTGCTCGCGCCGACCGACGCCGCGGCGCTCTCC
GATCTCGCCTATGCACGCATGCGCGCTGGCGACCCCGGCGGCGCGCGCGTGCCGCTGATGAAGGCCGCCGAGCTCGATCA
CCGCAACCCGCGCATCATGAGCAACCTCGCCCTGTTCCTGATGGCGAGCGGCCATCCGGAGAACGCGCAGGGCCTGATGG
ACCAGCAGCACATGACGCCTCGGGTGCGTGCCGAGATTCGCGACGACGCGGCCCGTGTCACGGCCGCGCAGCGCGCTCGG
CAGCTTACCGTGGTGCCGCCGGGGCCGGGCGACGCGGCGGGGCCGTCCGGCGCGCGCGCGGGCGGCGCGCCGATCGCGAG
CAACGAGGGCTTCGACCTGGCCGCACCGCTGCTGCAGCGCTTCTCGCAAAAATGA

Upstream 100 bases:

>100_bases
CTGATCGTGACGGCCGGCCCGGGCATCATGACCGTGGTGGTCGCGCTGGCGAACATGAAGCGCTGATGGCGGGCGATGCG
ATGAAGAGGAGCGCGGCGGG

Downstream 100 bases:

>100_bases
TTTACCACACGGAGCCGACGATGCGATATTCCCAATCCTGGCGGCCGCGCGCGCGTGCATGGCATACCGCGTGGGTTGCG
CTGGCGGCCCTGGCCGGCGC

Product: TPR-repeat pilus assembly protein TadD

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein TadD; Lipoprotein; Lipoprotein Transmembrane; Tetratricopeptide Repeat Family; TPR Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain Protein; Tetratricopeptide TPR_2 Repeat-Containing Protein; Flp Pilus Assembly Protein TadD Contains TPRrepeats; Pilus Assembly Protein Tadd

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKRSKGRTMLAGLLVAGLASGCSLFKDSNYGVGAQAERAAMIQAAADKVDPPDTPGMYLGLIDRMQQQGLYYASLAHIDE
YEKQYGASADTRLLRADALRATSQLDASEQAYTQLLNTPLAARGYRGLGLIAGARGDFARAAKLLEQATLLAPTDAAALS
DLAYARMRAGDPGGARVPLMKAAELDHRNPRIMSNLALFLMASGHPENAQGLMDQQHMTPRVRAEIRDDAARVTAAQRAR
QLTVVPPGPGDAAGPSGARAGGAPIASNEGFDLAAPLLQRFSQK

Sequences:

>Translated_284_residues
MKRSKGRTMLAGLLVAGLASGCSLFKDSNYGVGAQAERAAMIQAAADKVDPPDTPGMYLGLIDRMQQQGLYYASLAHIDE
YEKQYGASADTRLLRADALRATSQLDASEQAYTQLLNTPLAARGYRGLGLIAGARGDFARAAKLLEQATLLAPTDAAALS
DLAYARMRAGDPGGARVPLMKAAELDHRNPRIMSNLALFLMASGHPENAQGLMDQQHMTPRVRAEIRDDAARVTAAQRAR
QLTVVPPGPGDAAGPSGARAGGAPIASNEGFDLAAPLLQRFSQK
>Mature_284_residues
MKRSKGRTMLAGLLVAGLASGCSLFKDSNYGVGAQAERAAMIQAAADKVDPPDTPGMYLGLIDRMQQQGLYYASLAHIDE
YEKQYGASADTRLLRADALRATSQLDASEQAYTQLLNTPLAARGYRGLGLIAGARGDFARAAKLLEQATLLAPTDAAALS
DLAYARMRAGDPGGARVPLMKAAELDHRNPRIMSNLALFLMASGHPENAQGLMDQQHMTPRVRAEIRDDAARVTAAQRAR
QLTVVPPGPGDAAGPSGARAGGAPIASNEGFDLAAPLLQRFSQK

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30000; Mature: 30000

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSKGRTMLAGLLVAGLASGCSLFKDSNYGVGAQAERAAMIQAAADKVDPPDTPGMYLG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
LIDRMQQQGLYYASLAHIDEYEKQYGASADTRLLRADALRATSQLDASEQAYTQLLNTPL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
AARGYRGLGLIAGARGDFARAAKLLEQATLLAPTDAAALSDLAYARMRAGDPGGARVPLM
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
KAAELDHRNPRIMSNLALFLMASGHPENAQGLMDQQHMTPRVRAEIRDDAARVTAAQRAR
HHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
QLTVVPPGPGDAAGPSGARAGGAPIASNEGFDLAAPLLQRFSQK
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKRSKGRTMLAGLLVAGLASGCSLFKDSNYGVGAQAERAAMIQAAADKVDPPDTPGMYLG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH
LIDRMQQQGLYYASLAHIDEYEKQYGASADTRLLRADALRATSQLDASEQAYTQLLNTPL
HHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
AARGYRGLGLIAGARGDFARAAKLLEQATLLAPTDAAALSDLAYARMRAGDPGGARVPLM
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
KAAELDHRNPRIMSNLALFLMASGHPENAQGLMDQQHMTPRVRAEIRDDAARVTAAQRAR
HHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
QLTVVPPGPGDAAGPSGARAGGAPIASNEGFDLAAPLLQRFSQK
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA