Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027512
Identifier: 238027512
GI number: 238027512
Start: 2110617
End: 2111936
Strand: Reverse
Name: 238027512
Synonym: bglu_1g19260
Alternate gene names: NA
Gene position: 2111936-2110617 (Counterclockwise)
Preceding gene: 238027513
Following gene: 238027511
Centisome position: 54.06
GC content: 59.09
Gene sequence:
>1320_bases ATGTCGCAATCGAACTTACTTCAATTCTTTAGAAAGTCGATCTCTGCTGGATTAGGTGCGTGGTTACTCATCGGTCCGAC AGTGCCAGCGCACGCGGCCGCCGAACCTGCGCCGCGTGCGCTGGAGTGGTCGGACCACCAACTTACACTCTCCATTGTGG AATGGGCCGAGCGTGCCAAGACATTCACCCAAAAATCATTGGCGGGCGGGGCGACACCGTCGGTTGCGACGACTCGCGCA CTGAGTTGGACGACGCTTGCGATGTTCGAGGCGCTGAATGCCGTCGATCATCGTTACAGGTCATATGCAGGCGTTACGCT AGCGGACGGTGAAGCGTCGGGCGACGCGGCAGTCCTCACGGCTGCGCACGAAGTGCTTGTCAGTCTTTATCCGGATCAGC GCAGTGACCTAGATCGCATCTATGGCCGGGAGTTGGATGCGATAGCGGATGGCGCAGCAAAGGCCAAGGGTGTAGCGATC GGCGCCAGCGCCGCAAAGGCCTCGCTTCGCCTGGGGGGACGGAACCTGCAGGTTCCGATCGAATTGTATCGTCCTTATAC GCTCGCCGGTACGTGGGTGCCGACGACGCTGCCCGTCATCGAGCCGTTTCAGTTGGTGTTGTCGCCGTGGTTTCTGTCTT CGCGCGAGCAACTCCGACCTAGCGGCCCCCCTGACCTCACCAGTGCCCGATATGCCGAGGACCTGAACGAGGTGGCAGCG CTCGGCGCCAAGGACAGCCAGATGCGCACGCCTGCCCAGACGAACGAAGCGCTGTTCTGGAATCGTATCGATCTCATGCC CGTTTTGCGCCAGATCGCTTCGATCGGAAGCCGCTCGGCGGTACAGAATGCCCACATGTATGCAGTACTTAGCATGTCGC TCGATGACGCCGACCTTGTCGCCGAAGATGCCAAAATGCACTTCTCGAGATGGCGCCCCATCACGGCCATACGCAATGCG GATCGCGATGGCAATCCTGCAACGAACCGCCAGGCCGATTGGTTGCCATTGCTCACTACGCCGATTCATCCCGAATATCC ATGCTGGCATTGCATCACGGCAGCGACGGTTGCTACTGCGTTAGAGGCTGAACTTGGAGCCGATCGCGACATGCCGCTGG TGTTTTTTTCCGAAAGTGTACCGAACGACGTTCGGATCGAATCGCTCCGCGCCTATTCACACGATGTATCGCGCTCGCGT GTTTACGCCGGCGTTCATTTCACGTTTTCCTGCAAGGACGGCGAGGAAATGGGCAGACGAGTCGGGGCGCTGTCGACGAA AGCTATCCCACTCCTTACTGACAAGAGAGGCTCGCTTTGA
Upstream 100 bases:
>100_bases CAGCAGCGCTTGTGCGAAGCAAGCCGGATGCTTCGGAACGACAATCCAGGGCTGAATAACCGAGCGTAGCAGCCATCTCA ACTCCAATAGAGAGAGGGTC
Downstream 100 bases:
>100_bases ACATACTGATAACGGGCGGTTCGGGTTTCATTGGGTCCCATTATGTGGATGCTTTTGTCGATCGCGGCGACCGAGTGACT ATCTTCGATAAGAATCCGCA
Product: PA-phosphatase-like protein phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; V-Chloroperoxidase; Phosphoesterase PA-Phosphatase-Like Protein; Chloride Peroxidase; PAP2 Superfamily Protein; Haloperoxidase; VaNADium Chloroperoxidase
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSQSNLLQFFRKSISAGLGAWLLIGPTVPAHAAAEPAPRALEWSDHQLTLSIVEWAERAKTFTQKSLAGGATPSVATTRA LSWTTLAMFEALNAVDHRYRSYAGVTLADGEASGDAAVLTAAHEVLVSLYPDQRSDLDRIYGRELDAIADGAAKAKGVAI GASAAKASLRLGGRNLQVPIELYRPYTLAGTWVPTTLPVIEPFQLVLSPWFLSSREQLRPSGPPDLTSARYAEDLNEVAA LGAKDSQMRTPAQTNEALFWNRIDLMPVLRQIASIGSRSAVQNAHMYAVLSMSLDDADLVAEDAKMHFSRWRPITAIRNA DRDGNPATNRQADWLPLLTTPIHPEYPCWHCITAATVATALEAELGADRDMPLVFFSESVPNDVRIESLRAYSHDVSRSR VYAGVHFTFSCKDGEEMGRRVGALSTKAIPLLTDKRGSL
Sequences:
>Translated_439_residues MSQSNLLQFFRKSISAGLGAWLLIGPTVPAHAAAEPAPRALEWSDHQLTLSIVEWAERAKTFTQKSLAGGATPSVATTRA LSWTTLAMFEALNAVDHRYRSYAGVTLADGEASGDAAVLTAAHEVLVSLYPDQRSDLDRIYGRELDAIADGAAKAKGVAI GASAAKASLRLGGRNLQVPIELYRPYTLAGTWVPTTLPVIEPFQLVLSPWFLSSREQLRPSGPPDLTSARYAEDLNEVAA LGAKDSQMRTPAQTNEALFWNRIDLMPVLRQIASIGSRSAVQNAHMYAVLSMSLDDADLVAEDAKMHFSRWRPITAIRNA DRDGNPATNRQADWLPLLTTPIHPEYPCWHCITAATVATALEAELGADRDMPLVFFSESVPNDVRIESLRAYSHDVSRSR VYAGVHFTFSCKDGEEMGRRVGALSTKAIPLLTDKRGSL >Mature_438_residues SQSNLLQFFRKSISAGLGAWLLIGPTVPAHAAAEPAPRALEWSDHQLTLSIVEWAERAKTFTQKSLAGGATPSVATTRAL SWTTLAMFEALNAVDHRYRSYAGVTLADGEASGDAAVLTAAHEVLVSLYPDQRSDLDRIYGRELDAIADGAAKAKGVAIG ASAAKASLRLGGRNLQVPIELYRPYTLAGTWVPTTLPVIEPFQLVLSPWFLSSREQLRPSGPPDLTSARYAEDLNEVAAL GAKDSQMRTPAQTNEALFWNRIDLMPVLRQIASIGSRSAVQNAHMYAVLSMSLDDADLVAEDAKMHFSRWRPITAIRNAD RDGNPATNRQADWLPLLTTPIHPEYPCWHCITAATVATALEAELGADRDMPLVFFSESVPNDVRIESLRAYSHDVSRSRV YAGVHFTFSCKDGEEMGRRVGALSTKAIPLLTDKRGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47793; Mature: 47661
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNLLQFFRKSISAGLGAWLLIGPTVPAHAAAEPAPRALEWSDHQLTLSIVEWAERAK CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH TFTQKSLAGGATPSVATTRALSWTTLAMFEALNAVDHRYRSYAGVTLADGEASGDAAVLT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHH AAHEVLVSLYPDQRSDLDRIYGRELDAIADGAAKAKGVAIGASAAKASLRLGGRNLQVPI HHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECHHHHHHHEECCCCEEEEE ELYRPYTLAGTWVPTTLPVIEPFQLVLSPWFLSSREQLRPSGPPDLTSARYAEDLNEVAA EEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH LGAKDSQMRTPAQTNEALFWNRIDLMPVLRQIASIGSRSAVQNAHMYAVLSMSLDDADLV CCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCHHHH AEDAKMHFSRWRPITAIRNADRDGNPATNRQADWLPLLTTPIHPEYPCWHCITAATVATA HHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH LEAELGADRDMPLVFFSESVPNDVRIESLRAYSHDVSRSRVYAGVHFTFSCKDGEEMGRR HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEEEEEEEEECCCHHHHHHH VGALSTKAIPLLTDKRGSL HCCCCCCCEEEEECCCCCC >Mature Secondary Structure SQSNLLQFFRKSISAGLGAWLLIGPTVPAHAAAEPAPRALEWSDHQLTLSIVEWAERAK CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH TFTQKSLAGGATPSVATTRALSWTTLAMFEALNAVDHRYRSYAGVTLADGEASGDAAVLT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHH AAHEVLVSLYPDQRSDLDRIYGRELDAIADGAAKAKGVAIGASAAKASLRLGGRNLQVPI HHHHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECHHHHHHHEECCCCEEEEE ELYRPYTLAGTWVPTTLPVIEPFQLVLSPWFLSSREQLRPSGPPDLTSARYAEDLNEVAA EEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHH LGAKDSQMRTPAQTNEALFWNRIDLMPVLRQIASIGSRSAVQNAHMYAVLSMSLDDADLV CCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCHHHH AEDAKMHFSRWRPITAIRNADRDGNPATNRQADWLPLLTTPIHPEYPCWHCITAATVATA HHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH LEAELGADRDMPLVFFSESVPNDVRIESLRAYSHDVSRSRVYAGVHFTFSCKDGEEMGRR HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHEEEEEEEEEEECCCHHHHHHH VGALSTKAIPLLTDKRGSL HCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA