Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027506
Identifier: 238027506
GI number: 238027506
Start: 2102045
End: 2103097
Strand: Reverse
Name: 238027506
Synonym: bglu_1g19200
Alternate gene names: NA
Gene position: 2103097-2102045 (Counterclockwise)
Preceding gene: 238027507
Following gene: 238027505
Centisome position: 53.84
GC content: 62.87
Gene sequence:
>1053_bases ATGAATCTTGACCCGGCTGCGCGCGCTGTTATGTCTCTCCCCGACCGATATGCGCCGGCGCACAATCCTCTGGAGCCCGA GGCACTGCCCCGGTGGCTGTCCTGTTTTCCGGAGAAGCTGGCCTTTTACGCCGCTGACGAAGCGTTTTGTGCAGGCTGGA GAACGATCGAGGCAATGGAGCGGGACGGCATGCTCGTGCTTTCGCGCCTTTGGAATATCGGATCGGTGCTGTTCAAAGCC GACAGCCTACTCAGGGGCAACACCCGAATCGGCATGGACGCCTTGGCGCAAGCCGGATTTCAAGTGCGGGTGGGGCGTGA AGTGACATTCGCACAGCCCTTGGTCCGGGAGTTCTGGCGGTATTCGCTCGGAAGATATTCCGACGAACGCATCGCGCTGC TGGCGCGCTTGCTGTCCGAGGCGCCTTCCCTCTATCTCCTCGTCGAAGCTGAACATCCCGACGAGCGCGTCCCGACCGCC CTTAGGTTGACCGATTTCAAGGGGGAACCCGTACCCGAACTGCGCGCACCGGGAAAACTGCGCTCGGCGTTGGGGCCACC CCAGTCGGCATTGCTGAACTATGTTCATACAGGTGACGAACCGGCCGACGTCGTGCGCGAACTGGGGCTCCTGTTCGACC AAGCGGAGCGCCATCGTTGTCTGGTGGATGCGTTAGCCGGCAGTGGGGCCGCCGCACGGGCGCTGTGCGATCGGCTATTG GCTGGCGCAGCACCTCGCGCAGACCTCGATTTCGAATCGGCACTTAAGCGCGTGCGCGAACGGGTGAGCCTTCGTCTATC GGGCACGGAAGCGCGGTGGGCGCATGTCATAGCGCGCCTCGAGCAAGTCGGCCGAGGGGAATCGGACGCTTGGTCGCCAC TCAAGCTGACGCTGAGCGAGTTCGGTGTCGATATCGATCCATTGGACGACATCGTCATCAGGGCACGGCTCGTGCCGTTG AAGAAGGCGCAGCCCACCCAGCCATTCCCGAGCTGCGAACTCCGCCATTGGCTCGAGTACGGTGTTCGCTCGCCGATGGA CCCCGCTCGATAG
Upstream 100 bases:
>100_bases TGTTCGAACATGACACGGTGGAAGAATTTGCACAGTGGCTGGAGGATCGTCTCGGCGCTGAACGCGCCGATGCACAATCG CTGGCCGGAGGAGGCGCTCT
Downstream 100 bases:
>100_bases TCGTGGCGGACCGACCGTTTGAATGCAACGGAGAAGATGGTGAACCTATGTTTGTGTTCGATCCCACTCGTCTTGATCTG GCAGCCGAATTTCGCAGGCA
Product: Nucleoside diphosphate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNLDPAARAVMSLPDRYAPAHNPLEPEALPRWLSCFPEKLAFYAADEAFCAGWRTIEAMERDGMLVLSRLWNIGSVLFKA DSLLRGNTRIGMDALAQAGFQVRVGREVTFAQPLVREFWRYSLGRYSDERIALLARLLSEAPSLYLLVEAEHPDERVPTA LRLTDFKGEPVPELRAPGKLRSALGPPQSALLNYVHTGDEPADVVRELGLLFDQAERHRCLVDALAGSGAAARALCDRLL AGAAPRADLDFESALKRVRERVSLRLSGTEARWAHVIARLEQVGRGESDAWSPLKLTLSEFGVDIDPLDDIVIRARLVPL KKAQPTQPFPSCELRHWLEYGVRSPMDPAR
Sequences:
>Translated_350_residues MNLDPAARAVMSLPDRYAPAHNPLEPEALPRWLSCFPEKLAFYAADEAFCAGWRTIEAMERDGMLVLSRLWNIGSVLFKA DSLLRGNTRIGMDALAQAGFQVRVGREVTFAQPLVREFWRYSLGRYSDERIALLARLLSEAPSLYLLVEAEHPDERVPTA LRLTDFKGEPVPELRAPGKLRSALGPPQSALLNYVHTGDEPADVVRELGLLFDQAERHRCLVDALAGSGAAARALCDRLL AGAAPRADLDFESALKRVRERVSLRLSGTEARWAHVIARLEQVGRGESDAWSPLKLTLSEFGVDIDPLDDIVIRARLVPL KKAQPTQPFPSCELRHWLEYGVRSPMDPAR >Mature_350_residues MNLDPAARAVMSLPDRYAPAHNPLEPEALPRWLSCFPEKLAFYAADEAFCAGWRTIEAMERDGMLVLSRLWNIGSVLFKA DSLLRGNTRIGMDALAQAGFQVRVGREVTFAQPLVREFWRYSLGRYSDERIALLARLLSEAPSLYLLVEAEHPDERVPTA LRLTDFKGEPVPELRAPGKLRSALGPPQSALLNYVHTGDEPADVVRELGLLFDQAERHRCLVDALAGSGAAARALCDRLL AGAAPRADLDFESALKRVRERVSLRLSGTEARWAHVIARLEQVGRGESDAWSPLKLTLSEFGVDIDPLDDIVIRARLVPL KKAQPTQPFPSCELRHWLEYGVRSPMDPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38962; Mature: 38962
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDPAARAVMSLPDRYAPAHNPLEPEALPRWLSCFPEKLAFYAADEAFCAGWRTIEAME CCCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RDGMLVLSRLWNIGSVLFKADSLLRGNTRIGMDALAQAGFQVRVGREVTFAQPLVREFWR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHH YSLGRYSDERIALLARLLSEAPSLYLLVEAEHPDERVPTALRLTDFKGEPVPELRAPGKL HHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHH RSALGPPQSALLNYVHTGDEPADVVRELGLLFDQAERHRCLVDALAGSGAAARALCDRLL HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGAAPRADLDFESALKRVRERVSLRLSGTEARWAHVIARLEQVGRGESDAWSPLKLTLSE HCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FGVDIDPLDDIVIRARLVPLKKAQPTQPFPSCELRHWLEYGVRSPMDPAR HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNLDPAARAVMSLPDRYAPAHNPLEPEALPRWLSCFPEKLAFYAADEAFCAGWRTIEAME CCCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RDGMLVLSRLWNIGSVLFKADSLLRGNTRIGMDALAQAGFQVRVGREVTFAQPLVREFWR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHH YSLGRYSDERIALLARLLSEAPSLYLLVEAEHPDERVPTALRLTDFKGEPVPELRAPGKL HHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHH RSALGPPQSALLNYVHTGDEPADVVRELGLLFDQAERHRCLVDALAGSGAAARALCDRLL HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGAAPRADLDFESALKRVRERVSLRLSGTEARWAHVIARLEQVGRGESDAWSPLKLTLSE HCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FGVDIDPLDDIVIRARLVPLKKAQPTQPFPSCELRHWLEYGVRSPMDPAR HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA