Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027503
Identifier: 238027503
GI number: 238027503
Start: 2099648
End: 2100352
Strand: Reverse
Name: 238027503
Synonym: bglu_1g19170
Alternate gene names: NA
Gene position: 2100352-2099648 (Counterclockwise)
Preceding gene: 238027504
Following gene: 238027502
Centisome position: 53.77
GC content: 55.74
Gene sequence:
>705_bases ATGACGCCGCATAGTCAATTATTTTCCATACACCAGGATGCTGACGGCCCACTCTTTGAGAGCGTCGGCGGCGATATCCG AGAGAGGATATGGTTCTGGAATAGTACGGTGTCCGATGATTCGCCCGATCGAACCACATATGGCTTTGTCATGTCGGGAG AATGCAAGCTTGAACTCGAAGCGTCTCGTCATGTCCTGGGGGTGGGTTGTTATTTCTCGGTTACTGGCGCGTTCACGATT CGAGGCGGCAAAGGGATGTTGATTCACGTGCCGGCATATCTCGGCCTGAACGCCGTGGGCGGCCCAATAGAGAGTCGCGG GCGGCTGCGATATATCGACGGCTGCACCGATACGTTGCTTATTCCACCCGTGAAACTGGGCGATCCTTGTCTGAATGCGC TTTATTTTCCGCGCGGCATTTCTCAGACGGCGCACACGCATCCCAGCGTGCGCCTCGGCGGCGTGTTGTCAGGCAGCGGA GTATGCAAGACCAACCTAGGCGATTACGTACTGGAGTCGGGTGTTTGCTTTTGTTTACCCGCCGGTCTTTCGCACGGCTT TCACACGACAAGCAGCGAATTGGTTGTCATGGCTTATCATCCTGACAGTGATTTCGGCCCGCAAGACGAAAACCATCCGA TGTTGAATCGCACGATCGTCGATGGCGTCAGCGCGCGTGCGCTACCTGCGCTGCATACGCGATGA
Upstream 100 bases:
>100_bases AATAAAGTGCGAATAGACTCGGGGCTGAATTTCCCGTTGTTATTCCAGATTGCGTTTGGCAGTTCCTTTTTGGTGATGAG AGTAGCCAGGAGCAACGCTG
Downstream 100 bases:
>100_bases GCAAAGCGCCTTTGCGTTTTCGCCCACAGCGCCGGGCCAGCGGGCCAAGCGTGGGTGTCTTGATCGTCGGTCTGGGGCAG GCAGGCGCACGGTTCGTGCG
Product: acetylornithine aminotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTPHSQLFSIHQDADGPLFESVGGDIRERIWFWNSTVSDDSPDRTTYGFVMSGECKLELEASRHVLGVGCYFSVTGAFTI RGGKGMLIHVPAYLGLNAVGGPIESRGRLRYIDGCTDTLLIPPVKLGDPCLNALYFPRGISQTAHTHPSVRLGGVLSGSG VCKTNLGDYVLESGVCFCLPAGLSHGFHTTSSELVVMAYHPDSDFGPQDENHPMLNRTIVDGVSARALPALHTR
Sequences:
>Translated_234_residues MTPHSQLFSIHQDADGPLFESVGGDIRERIWFWNSTVSDDSPDRTTYGFVMSGECKLELEASRHVLGVGCYFSVTGAFTI RGGKGMLIHVPAYLGLNAVGGPIESRGRLRYIDGCTDTLLIPPVKLGDPCLNALYFPRGISQTAHTHPSVRLGGVLSGSG VCKTNLGDYVLESGVCFCLPAGLSHGFHTTSSELVVMAYHPDSDFGPQDENHPMLNRTIVDGVSARALPALHTR >Mature_233_residues TPHSQLFSIHQDADGPLFESVGGDIRERIWFWNSTVSDDSPDRTTYGFVMSGECKLELEASRHVLGVGCYFSVTGAFTIR GGKGMLIHVPAYLGLNAVGGPIESRGRLRYIDGCTDTLLIPPVKLGDPCLNALYFPRGISQTAHTHPSVRLGGVLSGSGV CKTNLGDYVLESGVCFCLPAGLSHGFHTTSSELVVMAYHPDSDFGPQDENHPMLNRTIVDGVSARALPALHTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25202; Mature: 25071
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHSQLFSIHQDADGPLFESVGGDIRERIWFWNSTVSDDSPDRTTYGFVMSGECKLELE CCCCHHHEEEECCCCCCHHHHCCCHHHHHEEEECCCCCCCCCCCEEEEEEEECCEEEEEE ASRHVLGVGCYFSVTGAFTIRGGKGMLIHVPAYLGLNAVGGPIESRGRLRYIDGCTDTLL CCCEEEEEEEEEEEEEEEEEECCCEEEEEECHHHCCCCCCCCCCCCCCEEEECCCCCEEE IPPVKLGDPCLNALYFPRGISQTAHTHPSVRLGGVLSGSGVCKTNLGDYVLESGVCFCLP ECCCCCCCHHHHHEECCCCCCCCCCCCCCEEECEEECCCCEEECCCCHHHHHCCCEEEEE AGLSHGFHTTSSELVVMAYHPDSDFGPQDENHPMLNRTIVDGVSARALPALHTR CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TPHSQLFSIHQDADGPLFESVGGDIRERIWFWNSTVSDDSPDRTTYGFVMSGECKLELE CCCHHHEEEECCCCCCHHHHCCCHHHHHEEEECCCCCCCCCCCEEEEEEEECCEEEEEE ASRHVLGVGCYFSVTGAFTIRGGKGMLIHVPAYLGLNAVGGPIESRGRLRYIDGCTDTLL CCCEEEEEEEEEEEEEEEEEECCCEEEEEECHHHCCCCCCCCCCCCCCEEEECCCCCEEE IPPVKLGDPCLNALYFPRGISQTAHTHPSVRLGGVLSGSGVCKTNLGDYVLESGVCFCLP ECCCCCCCHHHHHEECCCCCCCCCCCCCCEEECEEECCCCEEECCCCHHHHHCCCEEEEE AGLSHGFHTTSSELVVMAYHPDSDFGPQDENHPMLNRTIVDGVSARALPALHTR CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA