Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027502
Identifier: 238027502
GI number: 238027502
Start: 2098413
End: 2099651
Strand: Reverse
Name: 238027502
Synonym: bglu_1g19160
Alternate gene names: NA
Gene position: 2099651-2098413 (Counterclockwise)
Preceding gene: 238027503
Following gene: 238027500
Centisome position: 53.75
GC content: 58.11
Gene sequence:
>1239_bases ATGAGCAAAGCGCCTTTGCGTTTTCGCCCACAGCGCCGGGCCAGCGGGCCAAGCGTGGGTGTCTTGATCGTCGGTCTGGG GCAGGCAGGCGCACGGTTCGTGCGGGCGTGCATGGCGATGAACACAGGGTTGACCAAAGTTGTCGTCGTGGCGGGTGTCG ACGTCGGAAAGGAGCGCTGCGAGGCGTTCGAAAATGGTCTCGCGTTTCCTTGCTTCGGTTCGATCGAGGAGGCCGCCTCG AAAGTAACGCCCGACATCGTCGTTGTGACTGCCGCTGAGGATCAGCACTTTCGAATCCTTATGTCGATACGGCGATGTTT CCCTCGCGTTCGGCGCGTTCTTTGCGAAAAGCCGTTGACCTCCACTGCCAGCGAGGCGCGCGAACTGGCGCAGCATTATG GTGAGAAAGAGGTTTCCGTCAATTTCGTCGAGCGGTTCAGTCCTATCGTGACGGCCTTGCAGCGGTTCATGCAGCAACGC CGACGCACCATACTGAGGGCGAACTGCTTTTGGGGAAAATATCGCGTCAAGGATGCACGACCCACACTTGGCGTCATTTC GGTGGAGTTGGCACATCCTGTCGATCTAGTTTTGATGCTGGCATGCGTCCACCCCGGCACACATTTCAAGGTCGCCTCGG CTGTGGCGTCGCGCAGCAATTTCGATGTCGGCGAGCACAGCGTACTGCCGCTGGATACCGTTCATGCATCGCTGGAATTC GCAAGCGGCCTGCAGATGATCGTATCCACTTCACTGCTCTGGGCGGAACGTCAGCGCAAGATCGAATTGACGCTGGCGGA CCGTGACGGGAACGCATCGGAGCTGGTGGTACTGACGTTCGATAAGCCAATGTGGGATCTCGATCGGCTGGAGGTCTATG AAATTCGGCAAACGGGCGGGCGGCCTGATCTCATTGAGACGATGGATGTCGACGCCGCATCATGGAATACTGACCGCCTC ACGATAGGGAAAGTCTGCGCATTTCTGGAATCCAATCTCCGGGAAATCGCCGGCGAAACACATGATTTGGTGCCGAGATT GTCACAAGCGATGTACGTGCAGGAAGTGCTCGAGCGCATTGAGGATGCAGCAAACGTCACGGCCATGTCGACGGCCTGTT ACGTGGAGCCTCGGATAAGCGGGGGGGTCCCCCTGTCTGCCCATGTTCACGTGCTTGCGCGTATCGCCGACGGTGTGCCG ATCGACGGACCGGAATACATTTGGGATAACCCATATTGA
Upstream 100 bases:
>100_bases CTGACAGTGATTTCGGCCCGCAAGACGAAAACCATCCGATGTTGAATCGCACGATCGTCGATGGCGTCAGCGCGCGTGCG CTACCTGCGCTGCATACGCG
Downstream 100 bases:
>100_bases GGCGCGGCAGCGAGAACGGCGGTCATCACGAGACTATGGAGAGCAGGTCGCGCTGGTGAGCGAGGTAGGCGCGGTATCGT GGAACCGAAACGTCACGAAA
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: Oxidoreductase-Like Protein
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSKAPLRFRPQRRASGPSVGVLIVGLGQAGARFVRACMAMNTGLTKVVVVAGVDVGKERCEAFENGLAFPCFGSIEEAAS KVTPDIVVVTAAEDQHFRILMSIRRCFPRVRRVLCEKPLTSTASEARELAQHYGEKEVSVNFVERFSPIVTALQRFMQQR RRTILRANCFWGKYRVKDARPTLGVISVELAHPVDLVLMLACVHPGTHFKVASAVASRSNFDVGEHSVLPLDTVHASLEF ASGLQMIVSTSLLWAERQRKIELTLADRDGNASELVVLTFDKPMWDLDRLEVYEIRQTGGRPDLIETMDVDAASWNTDRL TIGKVCAFLESNLREIAGETHDLVPRLSQAMYVQEVLERIEDAANVTAMSTACYVEPRISGGVPLSAHVHVLARIADGVP IDGPEYIWDNPY
Sequences:
>Translated_412_residues MSKAPLRFRPQRRASGPSVGVLIVGLGQAGARFVRACMAMNTGLTKVVVVAGVDVGKERCEAFENGLAFPCFGSIEEAAS KVTPDIVVVTAAEDQHFRILMSIRRCFPRVRRVLCEKPLTSTASEARELAQHYGEKEVSVNFVERFSPIVTALQRFMQQR RRTILRANCFWGKYRVKDARPTLGVISVELAHPVDLVLMLACVHPGTHFKVASAVASRSNFDVGEHSVLPLDTVHASLEF ASGLQMIVSTSLLWAERQRKIELTLADRDGNASELVVLTFDKPMWDLDRLEVYEIRQTGGRPDLIETMDVDAASWNTDRL TIGKVCAFLESNLREIAGETHDLVPRLSQAMYVQEVLERIEDAANVTAMSTACYVEPRISGGVPLSAHVHVLARIADGVP IDGPEYIWDNPY >Mature_411_residues SKAPLRFRPQRRASGPSVGVLIVGLGQAGARFVRACMAMNTGLTKVVVVAGVDVGKERCEAFENGLAFPCFGSIEEAASK VTPDIVVVTAAEDQHFRILMSIRRCFPRVRRVLCEKPLTSTASEARELAQHYGEKEVSVNFVERFSPIVTALQRFMQQRR RTILRANCFWGKYRVKDARPTLGVISVELAHPVDLVLMLACVHPGTHFKVASAVASRSNFDVGEHSVLPLDTVHASLEFA SGLQMIVSTSLLWAERQRKIELTLADRDGNASELVVLTFDKPMWDLDRLEVYEIRQTGGRPDLIETMDVDAASWNTDRLT IGKVCAFLESNLREIAGETHDLVPRLSQAMYVQEVLERIEDAANVTAMSTACYVEPRISGGVPLSAHVHVLARIADGVPI DGPEYIWDNPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45601; Mature: 45470
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAPLRFRPQRRASGPSVGVLIVGLGQAGARFVRACMAMNTGLTKVVVVAGVDVGKERC CCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH EAFENGLAFPCFGSIEEAASKVTPDIVVVTAAEDQHFRILMSIRRCFPRVRRVLCEKPLT HHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC STASEARELAQHYGEKEVSVNFVERFSPIVTALQRFMQQRRRTILRANCFWGKYRVKDAR CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEECCCC PTLGVISVELAHPVDLVLMLACVHPGTHFKVASAVASRSNFDVGEHSVLPLDTVHASLEF CCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ASGLQMIVSTSLLWAERQRKIELTLADRDGNASELVVLTFDKPMWDLDRLEVYEIRQTGG HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC RPDLIETMDVDAASWNTDRLTIGKVCAFLESNLREIAGETHDLVPRLSQAMYVQEVLERI CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH EDAANVTAMSTACYVEPRISGGVPLSAHVHVLARIADGVPIDGPEYIWDNPY HHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SKAPLRFRPQRRASGPSVGVLIVGLGQAGARFVRACMAMNTGLTKVVVVAGVDVGKERC CCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH EAFENGLAFPCFGSIEEAASKVTPDIVVVTAAEDQHFRILMSIRRCFPRVRRVLCEKPLT HHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC STASEARELAQHYGEKEVSVNFVERFSPIVTALQRFMQQRRRTILRANCFWGKYRVKDAR CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEECCCC PTLGVISVELAHPVDLVLMLACVHPGTHFKVASAVASRSNFDVGEHSVLPLDTVHASLEF CCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ASGLQMIVSTSLLWAERQRKIELTLADRDGNASELVVLTFDKPMWDLDRLEVYEIRQTGG HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC RPDLIETMDVDAASWNTDRLTIGKVCAFLESNLREIAGETHDLVPRLSQAMYVQEVLERI CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH EDAANVTAMSTACYVEPRISGGVPLSAHVHVLARIADGVPIDGPEYIWDNPY HHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA