The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027479

Identifier: 238027479

GI number: 238027479

Start: 2064273

End: 2064710

Strand: Reverse

Name: 238027479

Synonym: bglu_1g18820

Alternate gene names: NA

Gene position: 2064710-2064273 (Counterclockwise)

Preceding gene: 238027482

Following gene: 238027478

Centisome position: 52.85

GC content: 68.04

Gene sequence:

>438_bases
ATGAAACCGCTCGATTTTTCCGGCATCGACCTGTTGCGTGCGGCGGCCGCGGGCGACGTGCCCGCACCGTCGATCACCCG
GACCATGCCGATGCAGCTCGACACGGTCGAGCTCGGCTACGTGAGGATGACGGCACGCGCCGACGAGCGCCATCTGAATC
CGCTGGGCGGCGTGCATGGCGGATTCGCCGCCACGGTGCTCGATTCGGTGACGGGCTGCGCGGTGCATTCGATGCTCGAG
CAGGGCGTCGGCTACGGCACGGTCGACCTGCACGTGAAGATGCTGCGCCCGGTGCCGCGCGACGTCGAACTGATCGCCGA
GGGGCGCGTGACGCATCTGTCGCGCACGCTCGGCGTTGCCGAGGGCACGCTCAAGACCCCCGACGACAAGATCGTCGCGC
AAGGCTCGGCCACCTGCTTCATCCTGCGGCCCGAATAA

Upstream 100 bases:

>100_bases
GATTACCGCGTTGACAGCATTCGATTGCGCAAAGAATAATGCGTTCTGTTTTGGAACTAACTAATGCGCCGGAATTCGCC
CGGCGATAAGGAGTGTGCTG

Downstream 100 bases:

>100_bases
GCGCGCAGCGGGGGCGAGGGCGCGCCACGGCCCACGCCTTCGGCGCCGTCTTGACCGCTGCCCGCCGCGCGGCCGCCGCG
GCTACGCGGTGCCCGATGCG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase; Aromatic Compounds Catabolic Protein; PaaI Thioesterase; Aromatic Compounds Degradation Protein PaaI; Domain 1 Protein; Protein Involved In Aromatic Compounds Catabolism; Orf_Bo

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKPLDFSGIDLLRAAAAGDVPAPSITRTMPMQLDTVELGYVRMTARADERHLNPLGGVHGGFAATVLDSVTGCAVHSMLE
QGVGYGTVDLHVKMLRPVPRDVELIAEGRVTHLSRTLGVAEGTLKTPDDKIVAQGSATCFILRPE

Sequences:

>Translated_145_residues
MKPLDFSGIDLLRAAAAGDVPAPSITRTMPMQLDTVELGYVRMTARADERHLNPLGGVHGGFAATVLDSVTGCAVHSMLE
QGVGYGTVDLHVKMLRPVPRDVELIAEGRVTHLSRTLGVAEGTLKTPDDKIVAQGSATCFILRPE
>Mature_145_residues
MKPLDFSGIDLLRAAAAGDVPAPSITRTMPMQLDTVELGYVRMTARADERHLNPLGGVHGGFAATVLDSVTGCAVHSMLE
QGVGYGTVDLHVKMLRPVPRDVELIAEGRVTHLSRTLGVAEGTLKTPDDKIVAQGSATCFILRPE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15417; Mature: 15417

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLDFSGIDLLRAAAAGDVPAPSITRTMPMQLDTVELGYVRMTARADERHLNPLGGVHG
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECEEEECEEEEECCCCCCCCCCCCCCCC
GFAATVLDSVTGCAVHSMLEQGVGYGTVDLHVKMLRPVPRDVELIAEGRVTHLSRTLGVA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCC
EGTLKTPDDKIVAQGSATCFILRPE
CCCCCCCCCCEEECCCCEEEEECCC
>Mature Secondary Structure
MKPLDFSGIDLLRAAAAGDVPAPSITRTMPMQLDTVELGYVRMTARADERHLNPLGGVHG
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEECEEEECEEEEECCCCCCCCCCCCCCCC
GFAATVLDSVTGCAVHSMLEQGVGYGTVDLHVKMLRPVPRDVELIAEGRVTHLSRTLGVA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCC
EGTLKTPDDKIVAQGSATCFILRPE
CCCCCCCCCCEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA