Click here to switch to the map view.

The map label for this gene is yraQ [H]

Identifier: 238027478

GI number: 238027478

Start: 2062770

End: 2063831

Strand: Reverse

Name: yraQ [H]

Synonym: bglu_1g18810

Alternate gene names: 238027478

Gene position: 2063831-2062770 (Counterclockwise)

Preceding gene: 238027479

Following gene: 339905968

Centisome position: 52.83

GC content: 71.66

Gene sequence:

>1062_bases
ATGAACACGACCCGCACCACGACCACTTCTCCGGCGCTCGGCTGGGCGACATTCGCGCTGATCGCGATCGTCGGTCTGTT
CTACGTGAAGTGGTTTCCGTACTACCACCGCGCCTTCGTCGCGGCCGAGCATCATTCGATCGGCCAGTCGATCCTGATGG
GCGCCGCGAGCAACGCGCCGGCGCCGTCCTGGCGCGCGGCGCTCGATTACGCCTGGGCCTACGGCAAGGCGATCTGGCAG
GCGATGGTGCTGGGCCTGCTGCTCGGCTCGGCGATCCAGGCGCTGTTGCCCGCGCGAGCGATCGCGCGGCTGCTCGGACG
CACCGGCTTCGGCAGCGTCGTCGCGGGCGGCCTGCTGTCGTTGCCGGGCATGATGTGTACCTGCTGCGCCGCGCCGGTGG
TGGCCGGCCTGCGCGCGCGGCAGGCGTCGCCGGGCGGCGCGGTGGCGTTCTGGCTCGGCAACACGGTGCTCAATCCGGCC
ACGCTGGTCTTCATCGGCTTCGTGCTCGGCTGGCAGTGGGTCGGCCTGCGGATCGCGTTCGGCGTCGTGATGGTGTTCGG
CATCGGCTATCTGCTGAACCGGCTCGCAGCACCGGCTGCGCCGCCCCTCGACGACGCGACGCTGGCTCGCCTCGCGGCCG
GGCAGGCCGTACCGGGCAATCCGTTCGCGCGCTGGCTCGAACTGCTCGCGCGCATGACGCTGCGCCTCGTGCCCGAGTAC
ATCGTGCTGGTGCTGCTGCTCGGCGCGGCGCGCGCGTGGCTGTTCCCGCATGTCGGCGCGGACGTCGGCAACACCGTGCT
GTGGATCGTCGCGTTCGCGGTCGCCGGCATGCTGTTCGTGATTCCGACTGCGGGCGAGGTGCCGATCGTCCAGGCCATGC
TCGCGCTGGGCGTGGGCGTCGGCCCGGCCGCGGCGCTGCTGCTGACGCTGCCGCCCGTGAGCGTGCCGTCGATGGCGATG
CTGTCGCGTTCGTTCCCGGCCCGTTCGCTCGCGCTGGTCGCGGCGCTCGTGGTGGGTTTCGGCATCGTGGGCGGCTTCGC
CGCGGTGGCGCTCGGCTTCTGA

Upstream 100 bases:

>100_bases
GATGACGGGCGCCGCGCCTGGCTTTGCGCAGGCGCGGATCCATGCAGGCGGGCGACCGAGCCCGCCGATCACGCTCACGG
GCCCGCACGCAGTCAAGGAC

Downstream 100 bases:

>100_bases
GCGCCGGCGTCCGACCGGCTCCGTGTCTCGGCCGCGCCGCCCATCCCGTGCGGCCAGAAGCATGACGAATCGACCGCCGC
CGCGATCTCGCGGCGGCTTC

Product: Permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNTTRTTTTSPALGWATFALIAIVGLFYVKWFPYYHRAFVAAEHHSIGQSILMGAASNAPAPSWRAALDYAWAYGKAIWQ
AMVLGLLLGSAIQALLPARAIARLLGRTGFGSVVAGGLLSLPGMMCTCCAAPVVAGLRARQASPGGAVAFWLGNTVLNPA
TLVFIGFVLGWQWVGLRIAFGVVMVFGIGYLLNRLAAPAAPPLDDATLARLAAGQAVPGNPFARWLELLARMTLRLVPEY
IVLVLLLGAARAWLFPHVGADVGNTVLWIVAFAVAGMLFVIPTAGEVPIVQAMLALGVGVGPAAALLLTLPPVSVPSMAM
LSRSFPARSLALVAALVVGFGIVGGFAAVALGF

Sequences:

>Translated_353_residues
MNTTRTTTTSPALGWATFALIAIVGLFYVKWFPYYHRAFVAAEHHSIGQSILMGAASNAPAPSWRAALDYAWAYGKAIWQ
AMVLGLLLGSAIQALLPARAIARLLGRTGFGSVVAGGLLSLPGMMCTCCAAPVVAGLRARQASPGGAVAFWLGNTVLNPA
TLVFIGFVLGWQWVGLRIAFGVVMVFGIGYLLNRLAAPAAPPLDDATLARLAAGQAVPGNPFARWLELLARMTLRLVPEY
IVLVLLLGAARAWLFPHVGADVGNTVLWIVAFAVAGMLFVIPTAGEVPIVQAMLALGVGVGPAAALLLTLPPVSVPSMAM
LSRSFPARSLALVAALVVGFGIVGGFAAVALGF
>Mature_353_residues
MNTTRTTTTSPALGWATFALIAIVGLFYVKWFPYYHRAFVAAEHHSIGQSILMGAASNAPAPSWRAALDYAWAYGKAIWQ
AMVLGLLLGSAIQALLPARAIARLLGRTGFGSVVAGGLLSLPGMMCTCCAAPVVAGLRARQASPGGAVAFWLGNTVLNPA
TLVFIGFVLGWQWVGLRIAFGVVMVFGIGYLLNRLAAPAAPPLDDATLARLAAGQAVPGNPFARWLELLARMTLRLVPEY
IVLVLLLGAARAWLFPHVGADVGNTVLWIVAFAVAGMLFVIPTAGEVPIVQAMLALGVGVGPAAALLLTLPPVSVPSMAM
LSRSFPARSLALVAALVVGFGIVGGFAAVALGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=347, Percent_Identity=51.2968299711816, Blast_Score=310, Evalue=8e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36667; Mature: 36667

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTRTTTTSPALGWATFALIAIVGLFYVKWFPYYHRAFVAAEHHSIGQSILMGAASNAP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APSWRAALDYAWAYGKAIWQAMVLGLLLGSAIQALLPARAIARLLGRTGFGSVVAGGLLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LPGMMCTCCAAPVVAGLRARQASPGGAVAFWLGNTVLNPATLVFIGFVLGWQWVGLRIAF
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
GVVMVFGIGYLLNRLAAPAAPPLDDATLARLAAGQAVPGNPFARWLELLARMTLRLVPEY
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVLVLLLGAARAWLFPHVGADVGNTVLWIVAFAVAGMLFVIPTAGEVPIVQAMLALGVGV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCC
GPAAALLLTLPPVSVPSMAMLSRSFPARSLALVAALVVGFGIVGGFAAVALGF
CHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTTRTTTTSPALGWATFALIAIVGLFYVKWFPYYHRAFVAAEHHSIGQSILMGAASNAP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APSWRAALDYAWAYGKAIWQAMVLGLLLGSAIQALLPARAIARLLGRTGFGSVVAGGLLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LPGMMCTCCAAPVVAGLRARQASPGGAVAFWLGNTVLNPATLVFIGFVLGWQWVGLRIAF
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
GVVMVFGIGYLLNRLAAPAAPPLDDATLARLAAGQAVPGNPFARWLELLARMTLRLVPEY
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVLVLLLGAARAWLFPHVGADVGNTVLWIVAFAVAGMLFVIPTAGEVPIVQAMLALGVGV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCC
GPAAALLLTLPPVSVPSMAMLSRSFPARSLALVAALVVGFGIVGGFAAVALGF
CHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]