| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027474
Identifier: 238027474
GI number: 238027474
Start: 2059548
End: 2060051
Strand: Reverse
Name: 238027474
Synonym: bglu_1g18770
Alternate gene names: NA
Gene position: 2060051-2059548 (Counterclockwise)
Preceding gene: 339905968
Following gene: 238027470
Centisome position: 52.73
GC content: 68.45
Gene sequence:
>504_bases ATGGCCAGTTATCAGAAAATCCTGCTCTGCTACGACGGCACGCTCGAGGGCCGCAAGGCGCTGCGCTGCGGTGCCGACCT CGCGCTCGAACTGAAGGCCGAGACCCATCTGCTGTCGGTGGTGGACATGCGCTCGAGCATCGCGCAGAGCGCCGGGCTGC TGACCGACGTTGCCTGCGGGCGTTTCGAGGAGACGGCGCGCGCGATCCTGCAGGAGGGCGTCGACTGGCTGACCGCGCGC GGCGTCCAGGCGCAGGGCCATTTCGCGTTCGGTTATCCGATCGACGAGATCGCGAATCTCGCGAAGGAGCTTGGCGCCGA TCTGGTCGTCGTCGGCCACCGCTGTCGCAGCGGGCTCTCGCGCTGGTGGATGGGCGCCGGCAACACGCAACTGCTCGACC GCGTTTCGTGCAGCATCCTGGTGGCCTGCGCGTCGTCCGACGAGCAGCGCGAGGAGCTGGCGAAGGAAAAGGAAGCCGCG CTCGCGGCGGCCTCCCAGGCCTGA
Upstream 100 bases:
>100_bases CACGCCTGCCCGGCAAGGGCCTGGGTGTTTTCCAGCCCTTGCATCCCGAATTGCGGCGCACGATCATGGAGCGACGACCG ATCTCGCAACGGAGGCGATC
Downstream 100 bases:
>100_bases GCGCCGGCCGGGCGGGACGATCGGCACGATCGATCGGCCGGACCGGCCCCCTTGCTTGGCAGGCGAGCCGGCGCGGCGCG AATTCCGTGCCCGCCGGCGG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Family Protein; Universal Stress Protein; Universal Stress Protein Family
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MASYQKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETARAILQEGVDWLTAR GVQAQGHFAFGYPIDEIANLAKELGADLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASSDEQREELAKEKEAA LAAASQA
Sequences:
>Translated_167_residues MASYQKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETARAILQEGVDWLTAR GVQAQGHFAFGYPIDEIANLAKELGADLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASSDEQREELAKEKEAA LAAASQA >Mature_166_residues ASYQKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACGRFEETARAILQEGVDWLTARG VQAQGHFAFGYPIDEIANLAKELGADLVVVGHRCRSGLSRWWMGAGNTQLLDRVSCSILVACASSDEQREELAKEKEAAL AAASQA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17942; Mature: 17810
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYQKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACG CCCCCEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHC RFEETARAILQEGVDWLTARGVQAQGHFAFGYPIDEIANLAKELGADLVVVGHRCRSGLS CHHHHHHHHHHHCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECHHHHHHHH RWWMGAGNTQLLDRVSCSILVACASSDEQREELAKEKEAALAAASQA HHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASYQKILLCYDGTLEGRKALRCGADLALELKAETHLLSVVDMRSSIAQSAGLLTDVACG CCCCEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHC RFEETARAILQEGVDWLTARGVQAQGHFAFGYPIDEIANLAKELGADLVVVGHRCRSGLS CHHHHHHHHHHHCHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECHHHHHHHH RWWMGAGNTQLLDRVSCSILVACASSDEQREELAKEKEAALAAASQA HHHCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA