| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is sbp [H]
Identifier: 238027470
GI number: 238027470
Start: 2056281
End: 2057315
Strand: Reverse
Name: sbp [H]
Synonym: bglu_1g18730
Alternate gene names: 238027470
Gene position: 2057315-2056281 (Counterclockwise)
Preceding gene: 238027474
Following gene: 238027469
Centisome position: 52.66
GC content: 66.57
Gene sequence:
>1035_bases ATGGTCAAGGGCAACATGGGGCTGGCGGGCGGGGTCCGCCGTCTGATCGCCACGCTGGCGGTAGGCACGGCGGCGCTCGG CGGCGTCACGCACGCACTCGCGGACACGACGTTGCTGAACGTCTCGTATGATCCGACCCGCGAGCTGTATCAGGACGTCA ACCAGGCGTTCGGCAAGGAATGGAAGGCCAAGACGGGCGAGACCGTCAACTTCAAGCAGTCGCACGGCGGCTCCGGCGCG CAGGCGCGCTCGGTGCTCGACGGCCTGCAGGCCGACGTGGTGACGCTCGCGCTCGCCTACGACATCGACGCGCTGGCCAA CAAGGGCCTCGTCGCCAAGGACTGGCAGAAGCGCCTGCCCGACAACGCCTCGCCTTACACCTCCACCATCGTGTTCCTGG TGCGCAAGGGCAACCCGAAGGGCATCAAGGATTGGGACGACCTGATCAAGCCGGGCGTGTCGATCGTCACGCCGAACCCG AAAACCTCGGGCGGCGCGCGCTGGAACTACCTCGCGGCCTGGGCCTACGCGCTGCACCGGCCGGGCGGCAACGCGCAGAG CGCGAAGGACTTCGTGGCCAAGCTCTACAAGAACGCGGGCGTGCTCGATTCGGGCGCGCGCGGCGCGACCACCAGCTTCG TGCAGCGCGGCATCGGCGACGTGCTGATCGCCTGGGAAAACGAGGCGTTCCTGTCGCTGAAGGAGTTCGGCCCTGACAAG TTCCAGATCGTCGTGCCCTCCGTCAGCATCCTGGCCGAGCCGCCCGTCGCGGTGGTCGACAAGGTGGTGGACAGGAAGGG CGACCGCAAGCTGGCCGAAGCCTATCTGAACTTCCTCTACAGCAAGCAGGGCCAGGAAATCGCGGCGCGCAATTTCTATC GCCCGCGCTCGAAGGACGTGCCGGCCGAACTGACGAAGCAGTTCCCGAAGCTCAAGCTCTACACCGTCGACGACACCTTC GGCGGCTGGGCCAACGCGCAGAAGACGCACTTCGCCGACGGCGGCGTGTTCGACTCGATCTACCAGCCGCAATAA
Upstream 100 bases:
>100_bases TATAAAAGAATTCGGAACGATTATTTTTAATGATGTAAGCCCTTCGCTAGACTGGCCCGGCATTGCAAAAAACGATCCAC GCACCTCGGGAGATCACGGG
Downstream 100 bases:
>100_bases GCGCGGCACGCAGTACCCGCGGCAGGGCAGCAAACCGAGGCCGCGCGGCGCGAGCGAGCGCACGCGCGGCCCGATACAAC GATGGACTCGAATTGACGCG
Product: Thiosulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF GGWANAQKTHFADGGVFDSIYQPQ
Sequences:
>Translated_344_residues MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF GGWANAQKTHFADGGVFDSIYQPQ >Mature_344_residues MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF GGWANAQKTHFADGGVFDSIYQPQ
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=321, Percent_Identity=65.7320872274143, Blast_Score=448, Evalue=1e-127, Organism=Escherichia coli, GI1788765, Length=307, Percent_Identity=47.8827361563518, Blast_Score=291, Evalue=3e-80,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37234; Mature: 37234
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCH WKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLP HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC DNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYALHR CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC PGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCCE FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDV EEEEECCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC PAELTKQFPKLKLYTVDDTFGGWANAQKTHFADGGVFDSIYQPQ CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCH WKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLP HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC DNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYALHR CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC PGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCCE FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDV EEEEECCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC PAELTKQFPKLKLYTVDDTFGGWANAQKTHFADGGVFDSIYQPQ CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]