Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is sbp [H]

Identifier: 238027470

GI number: 238027470

Start: 2056281

End: 2057315

Strand: Reverse

Name: sbp [H]

Synonym: bglu_1g18730

Alternate gene names: 238027470

Gene position: 2057315-2056281 (Counterclockwise)

Preceding gene: 238027474

Following gene: 238027469

Centisome position: 52.66

GC content: 66.57

Gene sequence:

>1035_bases
ATGGTCAAGGGCAACATGGGGCTGGCGGGCGGGGTCCGCCGTCTGATCGCCACGCTGGCGGTAGGCACGGCGGCGCTCGG
CGGCGTCACGCACGCACTCGCGGACACGACGTTGCTGAACGTCTCGTATGATCCGACCCGCGAGCTGTATCAGGACGTCA
ACCAGGCGTTCGGCAAGGAATGGAAGGCCAAGACGGGCGAGACCGTCAACTTCAAGCAGTCGCACGGCGGCTCCGGCGCG
CAGGCGCGCTCGGTGCTCGACGGCCTGCAGGCCGACGTGGTGACGCTCGCGCTCGCCTACGACATCGACGCGCTGGCCAA
CAAGGGCCTCGTCGCCAAGGACTGGCAGAAGCGCCTGCCCGACAACGCCTCGCCTTACACCTCCACCATCGTGTTCCTGG
TGCGCAAGGGCAACCCGAAGGGCATCAAGGATTGGGACGACCTGATCAAGCCGGGCGTGTCGATCGTCACGCCGAACCCG
AAAACCTCGGGCGGCGCGCGCTGGAACTACCTCGCGGCCTGGGCCTACGCGCTGCACCGGCCGGGCGGCAACGCGCAGAG
CGCGAAGGACTTCGTGGCCAAGCTCTACAAGAACGCGGGCGTGCTCGATTCGGGCGCGCGCGGCGCGACCACCAGCTTCG
TGCAGCGCGGCATCGGCGACGTGCTGATCGCCTGGGAAAACGAGGCGTTCCTGTCGCTGAAGGAGTTCGGCCCTGACAAG
TTCCAGATCGTCGTGCCCTCCGTCAGCATCCTGGCCGAGCCGCCCGTCGCGGTGGTCGACAAGGTGGTGGACAGGAAGGG
CGACCGCAAGCTGGCCGAAGCCTATCTGAACTTCCTCTACAGCAAGCAGGGCCAGGAAATCGCGGCGCGCAATTTCTATC
GCCCGCGCTCGAAGGACGTGCCGGCCGAACTGACGAAGCAGTTCCCGAAGCTCAAGCTCTACACCGTCGACGACACCTTC
GGCGGCTGGGCCAACGCGCAGAAGACGCACTTCGCCGACGGCGGCGTGTTCGACTCGATCTACCAGCCGCAATAA

Upstream 100 bases:

>100_bases
TATAAAAGAATTCGGAACGATTATTTTTAATGATGTAAGCCCTTCGCTAGACTGGCCCGGCATTGCAAAAAACGATCCAC
GCACCTCGGGAGATCACGGG

Downstream 100 bases:

>100_bases
GCGCGGCACGCAGTACCCGCGGCAGGGCAGCAAACCGAGGCCGCGCGGCGCGAGCGAGCGCACGCGCGGCCCGATACAAC
GATGGACTCGAATTGACGCG

Product: Thiosulfate-binding protein

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA
QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP
KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK
FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF
GGWANAQKTHFADGGVFDSIYQPQ

Sequences:

>Translated_344_residues
MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA
QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP
KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK
FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF
GGWANAQKTHFADGGVFDSIYQPQ
>Mature_344_residues
MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKEWKAKTGETVNFKQSHGGSGA
QARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLPDNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNP
KTSGGARWNYLAAWAYALHRPGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK
FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDVPAELTKQFPKLKLYTVDDTF
GGWANAQKTHFADGGVFDSIYQPQ

Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]

COG id: COG1613

COG function: function code P; ABC-type sulfate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI1790351, Length=321, Percent_Identity=65.7320872274143, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1788765, Length=307, Percent_Identity=47.8827361563518, Blast_Score=291, Evalue=3e-80,

Paralogues:

None

Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR000957
- InterPro:   IPR005669 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37234; Mature: 37234

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00757 PROK_SULFATE_BIND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCH
WKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLP
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
DNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYALHR
CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
PGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCCE
FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDV
EEEEECCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
PAELTKQFPKLKLYTVDDTFGGWANAQKTHFADGGVFDSIYQPQ
CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKGNMGLAGGVRRLIATLAVGTAALGGVTHALADTTLLNVSYDPTRELYQDVNQAFGKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCH
WKAKTGETVNFKQSHGGSGAQARSVLDGLQADVVTLALAYDIDALANKGLVAKDWQKRLP
HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
DNASPYTSTIVFLVRKGNPKGIKDWDDLIKPGVSIVTPNPKTSGGARWNYLAAWAYALHR
CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
PGGNAQSAKDFVAKLYKNAGVLDSGARGATTSFVQRGIGDVLIAWENEAFLSLKEFGPDK
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCEEEHHHCCCCE
FQIVVPSVSILAEPPVAVVDKVVDRKGDRKLAEAYLNFLYSKQGQEIAARNFYRPRSKDV
EEEEECCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
PAELTKQFPKLKLYTVDDTFGGWANAQKTHFADGGVFDSIYQPQ
CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]