| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cysW [H]
Identifier: 238027468
GI number: 238027468
Start: 2054303
End: 2055223
Strand: Reverse
Name: cysW [H]
Synonym: bglu_1g18710
Alternate gene names: 238027468
Gene position: 2055223-2054303 (Counterclockwise)
Preceding gene: 238027469
Following gene: 238027467
Centisome position: 52.61
GC content: 70.36
Gene sequence:
>921_bases ATGAGCCGCGAATCCACCTCAGCCGTGCTGCCCGCCGGCGCCGCGCCGCGTGCGAAGGCCGCGCGCCGGCGCGATCCCGT CACCGAATCGCGGCTGGTGCGCTGGGCGCTGACCGGCCTCGCGCTGCTGTTCCTGGCCGGCTTCCTGGTGGTGCCGCTCG CGGCCGTGTTCGCGCAGGCGCTGGCCAAGGGCATCGGCTTCTACTTCGAGGCGCTCGGCGACCCCGACGCCTGGGCCGCC ATCGAGCTGACCGTGACGGTGGCCGCGATCGCGGTGCCGCTGAACCTGGTGTTCGGGGTCTGCGCGTCGTGGGCGATCGC CAAGTTCGAGTTTCGCGGCAAGGCGCTGCTGACCACGCTGATCGACCTGCCGTTCTCGGTGTCGCCGGTCATCTCGGGCC TCGTCTACGTGCTGCTGTTCGGCGCGCAGGGCTGGCTCGGGCCGTGGCTCGAGGCACATGACGTCCAGATCATCTTCGCC GTGCCCGGCATCGTGCTGGCGACGATCTTCGTCACCTTCCCGTTCGTCGCGCGCGAGCTGATCCCGCTGATGCAGGCCCA AGGCAACGACGAGGAGGAAGCCGCGCGCGTGCTGGGCGCCTCCGGCTGGCAGATCTTCCGCCGCGTGACGCTGCCCAACG TGCGCTGGGGCCTGCTGTACGGCGTGATTCTCTGCAACGCGCGCGCGATGGGCGAGTTCGGCGCGGTATCGGTGGTGTCG GGCCATATCCGCGGCCAGACCGACACCATGCCGCTGCATGTCGAGATCCTCTACAACGAATACAACTTCTCGGCCGCGTT CGCGGTGGCCTCGGTGCTGGCCCTGCTCGCGCTCGTCACGCTGGCGCTGAAGCTGCTGGCCGAACGCCGCATGTCGGCCG AAATCGCCGCGGCGCGCGCTGGCGCCACGGCGCACTCCTGA
Upstream 100 bases:
>100_bases ATACGCTGCAATGGTGGCTGCAGCGCCGCACCGGCCGCAGCGCGAGCGCTCCGGTGCCGGCCGTGGCCGGCACTGCGGCG GCCGCCGCCGGAGGTGCGCA
Downstream 100 bases:
>100_bases TCGAAGAGGCACACCAGATGGGTATCACCGTTCGTAACCTGCACAAGCAATTCGGCGACTTCACGGCGCTCGACGACGTC TCGCTCGATTTCCCGCCCGG
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSRESTSAVLPAGAAPRAKAARRRDPVTESRLVRWALTGLALLFLAGFLVVPLAAVFAQALAKGIGFYFEALGDPDAWAA IELTVTVAAIAVPLNLVFGVCASWAIAKFEFRGKALLTTLIDLPFSVSPVISGLVYVLLFGAQGWLGPWLEAHDVQIIFA VPGIVLATIFVTFPFVARELIPLMQAQGNDEEEAARVLGASGWQIFRRVTLPNVRWGLLYGVILCNARAMGEFGAVSVVS GHIRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLALKLLAERRMSAEIAAARAGATAHS
Sequences:
>Translated_306_residues MSRESTSAVLPAGAAPRAKAARRRDPVTESRLVRWALTGLALLFLAGFLVVPLAAVFAQALAKGIGFYFEALGDPDAWAA IELTVTVAAIAVPLNLVFGVCASWAIAKFEFRGKALLTTLIDLPFSVSPVISGLVYVLLFGAQGWLGPWLEAHDVQIIFA VPGIVLATIFVTFPFVARELIPLMQAQGNDEEEAARVLGASGWQIFRRVTLPNVRWGLLYGVILCNARAMGEFGAVSVVS GHIRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLALKLLAERRMSAEIAAARAGATAHS >Mature_305_residues SRESTSAVLPAGAAPRAKAARRRDPVTESRLVRWALTGLALLFLAGFLVVPLAAVFAQALAKGIGFYFEALGDPDAWAAI ELTVTVAAIAVPLNLVFGVCASWAIAKFEFRGKALLTTLIDLPFSVSPVISGLVYVLLFGAQGWLGPWLEAHDVQIIFAV PGIVLATIFVTFPFVARELIPLMQAQGNDEEEAARVLGASGWQIFRRVTLPNVRWGLLYGVILCNARAMGEFGAVSVVSG HIRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLALKLLAERRMSAEIAAARAGATAHS
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=272, Percent_Identity=54.0441176470588, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=36.8932038834951, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI1786980, Length=231, Percent_Identity=31.6017316017316, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787369, Length=178, Percent_Identity=26.9662921348315, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32658; Mature: 32526
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRESTSAVLPAGAAPRAKAARRRDPVTESRLVRWALTGLALLFLAGFLVVPLAAVFAQA CCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKGIGFYFEALGDPDAWAAIELTVTVAAIAVPLNLVFGVCASWAIAKFEFRGKALLTTL HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IDLPFSVSPVISGLVYVLLFGAQGWLGPWLEAHDVQIIFAVPGIVLATIFVTFPFVAREL HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH IPLMQAQGNDEEEAARVLGASGWQIFRRVTLPNVRWGLLYGVILCNARAMGEFGAVSVVS HHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHC GHIRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLALKLLAERRMSAEIAAARA CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GATAHS CCCCCC >Mature Secondary Structure SRESTSAVLPAGAAPRAKAARRRDPVTESRLVRWALTGLALLFLAGFLVVPLAAVFAQA CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKGIGFYFEALGDPDAWAAIELTVTVAAIAVPLNLVFGVCASWAIAKFEFRGKALLTTL HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IDLPFSVSPVISGLVYVLLFGAQGWLGPWLEAHDVQIIFAVPGIVLATIFVTFPFVAREL HHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH IPLMQAQGNDEEEAARVLGASGWQIFRRVTLPNVRWGLLYGVILCNARAMGEFGAVSVVS HHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHC GHIRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLALKLLAERRMSAEIAAARA CCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GATAHS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]