| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cysU [H]
Identifier: 238027469
GI number: 238027469
Start: 2055220
End: 2056119
Strand: Reverse
Name: cysU [H]
Synonym: bglu_1g18720
Alternate gene names: 238027469
Gene position: 2056119-2055220 (Counterclockwise)
Preceding gene: 238027470
Following gene: 238027468
Centisome position: 52.63
GC content: 68.89
Gene sequence:
>900_bases ATGACGACGTACACCTTCCGCAAGCCGAGCGCGCTGCCCGGCTTCGGCGTGACGCTCGGCATCACGGTGGCCTATCTGAG CCTCGTGGTGCTGATACCGCTCGCCTCCACCTTTCTGAAGACCGCGACGCTGACCTGGGACCAGTTCGTCGCCGCGACGA CTTCCGCGCGCGTGCTCGCCTCGTACCGGCTCACCTTCCTTGCGGCGTTCGGCGGCGCGCTGATCAACGCCGTGTTCGGC TTCCTGGTGGCCTGGGTGCTGGTGCGCTACCGGTTCCCGTTCCAGCGCGTCGTCGACGCGATCGTCGACCTGCCGTTCGC GCTGCCGACCTCGGTCGCGGGCATTTCGCTGGCGGCCGTCTACGCCTCCAACGGCTGGCTCGGCCGCTATCTCGCGCCGC TGGGCATCAAGATCGCATTCACGCCGCTCGGCGTGCTGGTGGCGCTGACCTTCATCGGGCTGCCGTTCGTGGTGCGCACG GTGCAGCCCGTGCTCGAGGAATTCGAGCGCGAGCAGGAGGAGGCCGCCGCCTGCCTCGGCGCCTCGCGCTGGCTGACGTT CCGCCGGGTGGTGCTGCCGGCCGTGTTCCCGGCCCTGTTGACGGGCTTCGCGCTTGCGTTCGCGCGTGCGCTCGGCGAGT ACGGCTCGGTGATCTTCATCGCCGGAAACGTGCCGATGAAGTCCGAGATCACCTCGCTCTTGATCATCACCAAGCTCGAG CAGTACGACTACGCGGGCGCCACCGCGATCGCGGTGGTGATGCTGGTGGTCTCGTTCCTGATGCTGCTGCTCATCAATAC GCTGCAATGGTGGCTGCAGCGCCGCACCGGCCGCAGCGCGAGCGCTCCGGTGCCGGCCGTGGCCGGCACTGCGGCGGCCG CCGCCGGAGGTGCGCAATGA
Upstream 100 bases:
>100_bases ACGCGCGGCCCGATACAACGATGGACTCGAATTGACGCGCGGCCGGCCGGCACCTTCGGCGCGGCCGCGCCTCCCATGTC AACCTAGGAAGCGCATTCGC
Downstream 100 bases:
>100_bases GCCGCGAATCCACCTCAGCCGTGCTGCCCGCCGGCGCCGCGCCGCGTGCGAAGGCCGCGCGCCGGCGCGATCCCGTCACC GAATCGCGGCTGGTGCGCTG
Product: sulfate ABC transporter inner membrane subunit CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLASTFLKTATLTWDQFVAATTSARVLASYRLTFLAAFGGALINAVFG FLVAWVLVRYRFPFQRVVDAIVDLPFALPTSVAGISLAAVYASNGWLGRYLAPLGIKIAFTPLGVLVALTFIGLPFVVRT VQPVLEEFEREQEEAAACLGASRWLTFRRVVLPAVFPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATAIAVVMLVVSFLMLLLINTLQWWLQRRTGRSASAPVPAVAGTAAAAAGGAQ
Sequences:
>Translated_299_residues MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLASTFLKTATLTWDQFVAATTSARVLASYRLTFLAAFGGALINAVFG FLVAWVLVRYRFPFQRVVDAIVDLPFALPTSVAGISLAAVYASNGWLGRYLAPLGIKIAFTPLGVLVALTFIGLPFVVRT VQPVLEEFEREQEEAAACLGASRWLTFRRVVLPAVFPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE QYDYAGATAIAVVMLVVSFLMLLLINTLQWWLQRRTGRSASAPVPAVAGTAAAAAGGAQ >Mature_298_residues TTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLASTFLKTATLTWDQFVAATTSARVLASYRLTFLAAFGGALINAVFGF LVAWVLVRYRFPFQRVVDAIVDLPFALPTSVAGISLAAVYASNGWLGRYLAPLGIKIAFTPLGVLVALTFIGLPFVVRTV QPVLEEFEREQEEAAACLGASRWLTFRRVVLPAVFPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLEQ YDYAGATAIAVVMLVVSFLMLLLINTLQWWLQRRTGRSASAPVPAVAGTAAAAAGGAQ
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=264, Percent_Identity=50.7575757575758, Blast_Score=253, Evalue=9e-69, Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=33.5849056603774, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1786980, Length=223, Percent_Identity=31.8385650224215, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1786254, Length=227, Percent_Identity=29.5154185022026, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787369, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787368, Length=221, Percent_Identity=29.8642533936652, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31974; Mature: 31843
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLASTFLKTATLTWDQFVAATTSARVLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SYRLTFLAAFGGALINAVFGFLVAWVLVRYRFPFQRVVDAIVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YASNGWLGRYLAPLGIKIAFTPLGVLVALTFIGLPFVVRTVQPVLEEFEREQEEAAACLG HHCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVFPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATAIAVVMLVVSFLMLLLINTLQWWLQRRTGRSASAPVPAVAGTAAAAAGGAQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure TTYTFRKPSALPGFGVTLGITVAYLSLVVLIPLASTFLKTATLTWDQFVAATTSARVLA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SYRLTFLAAFGGALINAVFGFLVAWVLVRYRFPFQRVVDAIVDLPFALPTSVAGISLAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH YASNGWLGRYLAPLGIKIAFTPLGVLVALTFIGLPFVVRTVQPVLEEFEREQEEAAACLG HHCCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLTFRRVVLPAVFPALLTGFALAFARALGEYGSVIFIAGNVPMKSEITSLLIITKLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH QYDYAGATAIAVVMLVVSFLMLLLINTLQWWLQRRTGRSASAPVPAVAGTAAAAAGGAQ HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]