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The map label for this gene is arpC [H]

Identifier: 238027229

GI number: 238027229

Start: 1768674

End: 1770227

Strand: Reverse

Name: arpC [H]

Synonym: bglu_1g16150

Alternate gene names: 238027229

Gene position: 1770227-1768674 (Counterclockwise)

Preceding gene: 238027230

Following gene: 238027227

Centisome position: 45.31

GC content: 75.68

Gene sequence:

>1554_bases
ATGCCACGCTTCCCGTCCCGTTTCACCTCGCAGCGTCCGTCACGCGTCGCGCCGCGGCCGTCCCGCCGGCCGCGCCCGGC
GCCGGCACTGCGGCCTCTGCCGCCGCTGCGGCGGCTGTGCGCCGCGGCCGCGCTCGCGGCACTCGCCGGCTGCTCGCTGT
TCGGCCCCTCGGGCGCCGCGCCCGAGATGCCGTCGCCGGTGCAATACGGCGCCGCGCCGCTGCCCGAGCGCACCGTTGCC
GCGCAGGGCGTCGCGCAGCATTTCGAGGTCGGTGCGCAGCCGCTGCCAGAATGGTGGAAGCGTTATCGCTCCGGGCGGCT
CGACGCGCTGGTCGAGGAGGGCTTGCGTGCCAGCCCGACGCTGGCTGCCGCCGAGCATTCGCTGGCCGCCGCGCGCGAGC
AGTTGCGCGCGCAGATCGGCAGCTCGCTGCTGCCGACCGTCGACGCCGGCGGCCAGGCCACGCGCCAGCGCGGCCTAGGG
ATGCCGGGCTTCGGCCCGCAGACCGTGCTCTACAATGCGTTCGTCGGCCAGCTTCAGGCCAGCTACACGCTCGACCTGTT
CGGCGCCGCGCGCTTCGCGAACCGCGAACTGCGCCAGCGCGTGGACGTGACGGCGTTCCAGCTCGATTCGACGCGGCGCG
CGCTCGCCGCCAACATCGTTACCGCAGTGATCACCTCGGCGACGCTCGCCGAGCAGCTGCGCACCACCGAACGGCTCGTC
GCGCTCGCCAACGAGCAGGCCGACGACACCGAGCGCCGCAACCGGCTCGGCTCGGCATCGCATGCCGATCTGCTGAGCGC
GCGCCAGGGCGCCGCCTCGCTCGCCGCGACGCTTCCCGCGCTGCGCCAGCAGTGGCTCAGCGCACGGCATGCGCTGGCGG
TGCTGCTCGGCCGCACGCCGGACCAGGCGCCCGACGATCTCGCCCTGGCCGAGCTGCATCTACCCGAGGACGTGCCGGTG
GCGGTGCCCTCCACGCTGCTGCAGACGCGCCCCGACATCCGCGCGGCCGACGCGGCGCTGAAAGCGGCCGCGGCGGCCGT
CGGCGCGGCGACCGCGCAGCTGTTCCCGCAGATCTCGCTGTCCGCCGCGCTCGGGCAGGCCGGCTTCAGCTGGCCTGCGG
CGCTGTCGGGCGCGGGCGGCATCTGGAGCGTGGGCGCCTCGCTGACCCAGCCGCTGTTCCACGGCGGTGCGCTGCTCGCG
CAGCGGCGCGCCGCACAGGCCAGCTACGCGGCCGCCGTCGAGCAGTACAAAGCGACCGTGCTGGCGGCGTTCCAGAACGT
GGCCGATTCGCTGGCCGCGCTCGACAACGACGCGCAGGCGCTCGACGCGTCGAGCCGCGCGGCCGACGCCGCGCGCGGCG
TCTCGGACGACACGGCCGCACGCGTGCGGCTCGGCGCGCTGCCGCCGTCGGCCGCGCGCTCCAGCGAGCAGCAGTATCGC
AACGCGCAGCTCGACGCGATCCGCGCGACCGGCGCGCGGCTCGCCGATACGGCGCGGCTGTTCCAGGCGATGGGCACGCC
GCCGGAGGAAGCGAAGCGGGTGCTCGAGCCCTGA

Upstream 100 bases:

>100_bases
ACCTGCCGGCGCTCTACGCCACCTGGTTCCGCGTCAAGCCCACCGAGCGCGCCGAGGCGGACCGCACGCCGCCGCCCGCC
ACGTCCCACGGAGCCTGACG

Downstream 100 bases:

>100_bases
GGCGCCGACGCGGCGCACCGCGCGCCTGCCTGGCTCGCGTCGCGTGCGGCGCCGCCGCATCGCTTGCCGCGGCGCGCGCC
CTCACTCCCCGCTCCCGCCC

Product: NodT family efflux transporter outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPRFPSRFTSQRPSRVAPRPSRRPRPAPALRPLPPLRRLCAAAALAALAGCSLFGPSGAAPEMPSPVQYGAAPLPERTVA
AQGVAQHFEVGAQPLPEWWKRYRSGRLDALVEEGLRASPTLAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLG
MPGFGPQTVLYNAFVGQLQASYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSATLAEQLRTTERLV
ALANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSARHALAVLLGRTPDQAPDDLALAELHLPEDVPV
AVPSTLLQTRPDIRAADAALKAAAAAVGAATAQLFPQISLSAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLA
QRRAAQASYAAAVEQYKATVLAAFQNVADSLAALDNDAQALDASSRAADAARGVSDDTAARVRLGALPPSAARSSEQQYR
NAQLDAIRATGARLADTARLFQAMGTPPEEAKRVLEP

Sequences:

>Translated_517_residues
MPRFPSRFTSQRPSRVAPRPSRRPRPAPALRPLPPLRRLCAAAALAALAGCSLFGPSGAAPEMPSPVQYGAAPLPERTVA
AQGVAQHFEVGAQPLPEWWKRYRSGRLDALVEEGLRASPTLAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLG
MPGFGPQTVLYNAFVGQLQASYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSATLAEQLRTTERLV
ALANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSARHALAVLLGRTPDQAPDDLALAELHLPEDVPV
AVPSTLLQTRPDIRAADAALKAAAAAVGAATAQLFPQISLSAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLA
QRRAAQASYAAAVEQYKATVLAAFQNVADSLAALDNDAQALDASSRAADAARGVSDDTAARVRLGALPPSAARSSEQQYR
NAQLDAIRATGARLADTARLFQAMGTPPEEAKRVLEP
>Mature_516_residues
PRFPSRFTSQRPSRVAPRPSRRPRPAPALRPLPPLRRLCAAAALAALAGCSLFGPSGAAPEMPSPVQYGAAPLPERTVAA
QGVAQHFEVGAQPLPEWWKRYRSGRLDALVEEGLRASPTLAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLGM
PGFGPQTVLYNAFVGQLQASYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSATLAEQLRTTERLVA
LANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSARHALAVLLGRTPDQAPDDLALAELHLPEDVPVA
VPSTLLQTRPDIRAADAALKAAAAAVGAATAQLFPQISLSAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLAQ
RRAAQASYAAAVEQYKATVLAAFQNVADSLAALDNDAQALDASSRAADAARGVSDDTAARVRLGALPPSAARSSEQQYRN
AQLDAIRATGARLADTARLFQAMGTPPEEAKRVLEP

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=404, Percent_Identity=25.7425742574257, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI2367348, Length=444, Percent_Identity=24.3243243243243, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 54193; Mature: 54062

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFPSRFTSQRPSRVAPRPSRRPRPAPALRPLPPLRRLCAAAALAALAGCSLFGPSGAA
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PEMPSPVQYGAAPLPERTVAAQGVAQHFEVGAQPLPEWWKRYRSGRLDALVEEGLRASPT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC
LAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLGMPGFGPQTVLYNAFVGQLQA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSATLAEQLRTTERLV
HHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSARHALAVLLGRTP
HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQAPDDLALAELHLPEDVPVAVPSTLLQTRPDIRAADAALKAAAAAVGAATAQLFPQISL
CCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLAQRRAAQASYAAAVEQYKATV
HHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFQNVADSLAALDNDAQALDASSRAADAARGVSDDTAARVRLGALPPSAARSSEQQYR
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHEEECCCCCHHHHHHHHHHH
NAQLDAIRATGARLADTARLFQAMGTPPEEAKRVLEP
HHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure 
PRFPSRFTSQRPSRVAPRPSRRPRPAPALRPLPPLRRLCAAAALAALAGCSLFGPSGAA
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PEMPSPVQYGAAPLPERTVAAQGVAQHFEVGAQPLPEWWKRYRSGRLDALVEEGLRASPT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC
LAAAEHSLAAAREQLRAQIGSSLLPTVDAGGQATRQRGLGMPGFGPQTVLYNAFVGQLQA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SYTLDLFGAARFANRELRQRVDVTAFQLDSTRRALAANIVTAVITSATLAEQLRTTERLV
HHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALANEQADDTERRNRLGSASHADLLSARQGAASLAATLPALRQQWLSARHALAVLLGRTP
HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQAPDDLALAELHLPEDVPVAVPSTLLQTRPDIRAADAALKAAAAAVGAATAQLFPQISL
CCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAALGQAGFSWPAALSGAGGIWSVGASLTQPLFHGGALLAQRRAAQASYAAAVEQYKATV
HHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFQNVADSLAALDNDAQALDASSRAADAARGVSDDTAARVRLGALPPSAARSSEQQYR
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCHHHHEEECCCCCHHHHHHHHHHH
NAQLDAIRATGARLADTARLFQAMGTPPEEAKRVLEP
HHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]