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The map label for this gene is ybbM [C]

Identifier: 238027214

GI number: 238027214

Start: 1750217

End: 1751035

Strand: Reverse

Name: ybbM [C]

Synonym: bglu_1g16000

Alternate gene names: 238027214

Gene position: 1751035-1750217 (Counterclockwise)

Preceding gene: 238027215

Following gene: 238027211

Centisome position: 44.82

GC content: 72.53

Gene sequence:

>819_bases
ATGAGCCCGGTGCTGCAGGATCTGAGCCTCGGCGACGTCGCGCTCGCGGCCGCGCTGGTGGCCGTCAACGGGGCGCTCTC
GTGCGCCCTCTCGCTGGGCCTTGGCCGCCAGCTCGCGATCGCGGCCGCGCGTACCGTGGTGCAGCTGCTCGCGATCGGCT
ACCTGCTCGGCTGGGTGTTCGGACATCCGCGCTGGTACGTGGTGCTGCCGCTGATGGCCGTGATGACGCTGGTGGCGGGC
TTCGCCGGGGCCGCGCGCGGCGAGCGCGGCTACCGCGGGCAGCGCCTCGACAGCATCGTCTCGATCTGGATCGGCTCGTG
GGCGGTGAGCGCGCTCGGGCTGTTCGTCGTGATCGGCATCCATCCCTGGTACGAACCGCAATACACGATCCCGATCCTGG
GCATGATTCTCGGCAATGCGCTGACGGGCGTCGGCCTCGGCGTCGAACGCATGACGGGCGAGCTGACCGCGCGCCGCGAC
CGCGTGGAAGCCGCGCTCGCGCTCGGCGCGACGCGCTGGGAAGCGGCGCAGGACGCCGCCCGCCAGGCCGTGCGCGCGGG
CATGATGCCGACCCTGAACCAGATGGCGGTGGTCGGCGTGGTCAGCCTGCCGGGCATGATGACGGGCCAGGTGCTGGCCG
GCCAGCCGCCGCTGCAGGCGGTGCGCTACCAGATCGTGATCATGTTCCTGATCGCGGCCGCCGCGGCGCTCGCCACCGTC
GGCGCCGTGCTGCTGACCTACCGCCGGCTGTTCTCGGCCGAGCACCGCTTCCTCGCCGCGCGGCTGGTCGAGCGCAAGCG
GCACAAGAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCCGCGTCACGATGCGCGCCGGCGTGCTCGGCGAAGCGGAGGCCGACGGCGGCACGGCGGCGGCGCGCGAGGCGCGCGAC
CGCGCCGGCGGGGCGGCCCG

Downstream 100 bases:

>100_bases
ACCGGCCAGGGCCGCGCCGGCCGCATCGCTTGGCGCGCCGAGGCTTCACCCATGGCGCGCGCCGGACCGGCCGGGCCCGC
GGCGCCTCGGCTCAGGGATG

Product: putative ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSPVLQDLSLGDVALAAALVAVNGALSCALSLGLGRQLAIAAARTVVQLLAIGYLLGWVFGHPRWYVVLPLMAVMTLVAG
FAGAARGERGYRGQRLDSIVSIWIGSWAVSALGLFVVIGIHPWYEPQYTIPILGMILGNALTGVGLGVERMTGELTARRD
RVEAALALGATRWEAAQDAARQAVRAGMMPTLNQMAVVGVVSLPGMMTGQVLAGQPPLQAVRYQIVIMFLIAAAAALATV
GAVLLTYRRLFSAEHRFLAARLVERKRHKKAA

Sequences:

>Translated_272_residues
MSPVLQDLSLGDVALAAALVAVNGALSCALSLGLGRQLAIAAARTVVQLLAIGYLLGWVFGHPRWYVVLPLMAVMTLVAG
FAGAARGERGYRGQRLDSIVSIWIGSWAVSALGLFVVIGIHPWYEPQYTIPILGMILGNALTGVGLGVERMTGELTARRD
RVEAALALGATRWEAAQDAARQAVRAGMMPTLNQMAVVGVVSLPGMMTGQVLAGQPPLQAVRYQIVIMFLIAAAAALATV
GAVLLTYRRLFSAEHRFLAARLVERKRHKKAA
>Mature_271_residues
SPVLQDLSLGDVALAAALVAVNGALSCALSLGLGRQLAIAAARTVVQLLAIGYLLGWVFGHPRWYVVLPLMAVMTLVAGF
AGAARGERGYRGQRLDSIVSIWIGSWAVSALGLFVVIGIHPWYEPQYTIPILGMILGNALTGVGLGVERMTGELTARRDR
VEAALALGATRWEAAQDAARQAVRAGMMPTLNQMAVVGVVSLPGMMTGQVLAGQPPLQAVRYQIVIMFLIAAAAALATVG
AVLLTYRRLFSAEHRFLAARLVERKRHKKAA

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=261, Percent_Identity=30.2681992337165, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28876; Mature: 28745

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPVLQDLSLGDVALAAALVAVNGALSCALSLGLGRQLAIAAARTVVQLLAIGYLLGWVF
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GHPRWYVVLPLMAVMTLVAGFAGAARGERGYRGQRLDSIVSIWIGSWAVSALGLFVVIGI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
HPWYEPQYTIPILGMILGNALTGVGLGVERMTGELTARRDRVEAALALGATRWEAAQDAA
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQAVRAGMMPTLNQMAVVGVVSLPGMMTGQVLAGQPPLQAVRYQIVIMFLIAAAAALATV
HHHHHHCCCCCHHHHHHHHHHHCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAVLLTYRRLFSAEHRFLAARLVERKRHKKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]