| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027126
Identifier: 238027126
GI number: 238027126
Start: 1667817
End: 1668599
Strand: Reverse
Name: 238027126
Synonym: bglu_1g15060
Alternate gene names: NA
Gene position: 1668599-1667817 (Counterclockwise)
Preceding gene: 238027127
Following gene: 238027125
Centisome position: 42.71
GC content: 73.44
Gene sequence:
>783_bases ATGAGGCGAACCGCCACCGAAGGTCGCCTGCTCGTCGTCTCTCCGCATCTGGACGACGCCGTGCTCAGTTGCGGCCACGT GCTGGCGCGGCATCCCGGCGCGACCGTCTGCACGGTCCTGAGCGCGCCGCCGGAACGGAACATGGCGACGGACTGGGATC GTGCCTCGGGGTTTGCCGACGCTTTCGAGGCCATGCGCGCGCGCAGGCAGGAGGACCGGCAGGCGCTGGCACGGCTCGGC GCGTGTGCGCTGCACCTGCCGTTCTGCGACGCCCAGTACGCGTCGCCGCCCGATCGCGAGCGGCTGCACACGGCGCTGCG CCACACGCTCGCCGCGGTCCGCCCGGATTTGCTGCTGATGCCGCTCGGGCTGTTCCATTCCGATCACACGCTGGTGGCCG ACGCCATGCTCGCCTGCCTCGCCGCGCTGCGCCAGCAGGCATCCGGCGACGCGCCGGCGGCCGTCTACGCCTATGAAGAC GTGCCGTATCGCATGATGGACGGCCTCGTCGAGGCGCGCCTGGCGCTGCTCGCGGCGAACCGTTGCCGAGTGGAGCGGGC CGAGCTGGCGAGCGCCAACGGCGACCCGCGGCTCGGCCGGCTGAAGCCGGCCGCGATCGCGGCCTATCGCAGCCAGCTCC ACGCGTTCGGTCCCGACGGTCAGGCCAACCTGCACGCCGCCGAGCGTTACTGGCGCGTTCGCGAGGCGGCCGCCATCGCC GCGAACGGCGAGCCCGGCGCCGCGCGCCCCGCGCCGGACGCCCGCACGACTCAACCGTCATGA
Upstream 100 bases:
>100_bases AGCCGGCCGAACTCGCGCCCGTCTACGTGCTGCTGGCCTCCCAGGAGTCCAGCTTCGTCACCGGCGAGATCTACGGCGTC ACGGGCGGCCACCACCTGCC
Downstream 100 bases:
>100_bases GACTCGGGAGGATCGAAGCAATGCAAGCGATGCCGACTGCGCAACGCATCTCCGTGGTGGTGCTGACCTGGAACCGCGCC GACGAACTGGCGGCCACCCT
Product: LmbE-like protein
Products: NA
Alternate protein names: LmbE-Like Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRRTATEGRLLVVSPHLDDAVLSCGHVLARHPGATVCTVLSAPPERNMATDWDRASGFADAFEAMRARRQEDRQALARLG ACALHLPFCDAQYASPPDRERLHTALRHTLAAVRPDLLLMPLGLFHSDHTLVADAMLACLAALRQQASGDAPAAVYAYED VPYRMMDGLVEARLALLAANRCRVERAELASANGDPRLGRLKPAAIAAYRSQLHAFGPDGQANLHAAERYWRVREAAAIA ANGEPGAARPAPDARTTQPS
Sequences:
>Translated_260_residues MRRTATEGRLLVVSPHLDDAVLSCGHVLARHPGATVCTVLSAPPERNMATDWDRASGFADAFEAMRARRQEDRQALARLG ACALHLPFCDAQYASPPDRERLHTALRHTLAAVRPDLLLMPLGLFHSDHTLVADAMLACLAALRQQASGDAPAAVYAYED VPYRMMDGLVEARLALLAANRCRVERAELASANGDPRLGRLKPAAIAAYRSQLHAFGPDGQANLHAAERYWRVREAAAIA ANGEPGAARPAPDARTTQPS >Mature_260_residues MRRTATEGRLLVVSPHLDDAVLSCGHVLARHPGATVCTVLSAPPERNMATDWDRASGFADAFEAMRARRQEDRQALARLG ACALHLPFCDAQYASPPDRERLHTALRHTLAAVRPDLLLMPLGLFHSDHTLVADAMLACLAALRQQASGDAPAAVYAYED VPYRMMDGLVEARLALLAANRCRVERAELASANGDPRLGRLKPAAIAAYRSQLHAFGPDGQANLHAAERYWRVREAAAIA ANGEPGAARPAPDARTTQPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28063; Mature: 28063
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTATEGRLLVVSPHLDDAVLSCGHVLARHPGATVCTVLSAPPERNMATDWDRASGFAD CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHH AFEAMRARRQEDRQALARLGACALHLPFCDAQYASPPDRERLHTALRHTLAAVRPDLLLM HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH PLGLFHSDHTLVADAMLACLAALRQQASGDAPAAVYAYEDVPYRMMDGLVEARLALLAAN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH RCRVERAELASANGDPRLGRLKPAAIAAYRSQLHAFGPDGQANLHAAERYWRVREAAAIA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEE ANGEPGAARPAPDARTTQPS CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRTATEGRLLVVSPHLDDAVLSCGHVLARHPGATVCTVLSAPPERNMATDWDRASGFAD CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCHHH AFEAMRARRQEDRQALARLGACALHLPFCDAQYASPPDRERLHTALRHTLAAVRPDLLLM HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH PLGLFHSDHTLVADAMLACLAALRQQASGDAPAAVYAYEDVPYRMMDGLVEARLALLAAN HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH RCRVERAELASANGDPRLGRLKPAAIAAYRSQLHAFGPDGQANLHAAERYWRVREAAAIA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEE ANGEPGAARPAPDARTTQPS CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA