| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027115
Identifier: 238027115
GI number: 238027115
Start: 1653197
End: 1654279
Strand: Reverse
Name: 238027115
Synonym: bglu_1g14950
Alternate gene names: NA
Gene position: 1654279-1653197 (Counterclockwise)
Preceding gene: 238027116
Following gene: 238027114
Centisome position: 42.35
GC content: 73.96
Gene sequence:
>1083_bases ATGACCGCCCCCCTGCTGACGATCCAGCCACTGCCCTTCGACCCGATGTTCGAGCAGATTCCCGACGACGAGGCCGACAC GGTGCGCGAGCTGATCGACGCACTGCACCAGATCCAGCAGACCGCCGCGAACGACTGCGGCCACGCCCTGCGCAGCCTGC ATGCCAAGAGCCACGGCCTGCTGGACGGCGAACTGACGGTGGCCGAGGGCCTGCCGCCGCCGCTCGCGCAAGGCGTGTTC GCCCGCCGCGGCAGCTATCGCGTGACGCTGCGCCTGTCCACCACTCCCGGCGACCTGCTCGACGACGCGGTGTCGACGCC GCGCGGCCTCGCGCTGAAGCTCGCCGACGTCGACGGCGAGCGGCTGCCCGGCAGCGAGGCGCTGCGCACGCAGGACTTCG TGATGGTCAATGCGCCGGCCTTCTCCGCGCCCACGCCGAAGGCCTTCGTGCGCAGCCTGAAGCTGCTCGCGCAGACCACC GGCCGCGCCCCGGGCGGCAAGCGGGCGCTGTCGGCCGTGATGCGCGGCGCCGAGCGCATGCTCGAGGCGGCGGGCGTGCC TGGCGCGGCGCTGAAGAACCTCGGCGGCCATCCGGCCAGCCACCTCCTCGGCGAGACCTTCTACACCTGCGCGCCGTGCC TGTACGGGCCGTACTTCGCCAAGCTGGCCGTGGTGCCGGTGTCGCCGGAGCTGGTCGCGCTCAAGGGCGCGCCGCTCGAC CTGAAGGGCCGCCCCGACGCGCTGCGCGACGAAGTGGTGGCGTTCTTCGCGCGCCACGGCGGAGTCTGGGAGCTGCGCGT GCAGCTGGCGACCGACCTCGAGCGTATGCCGGTGGAGGATGCCTCGGCGGTCTGGCCCGAGGACGCGAGCCCCTACCTGA CCGTCGCCACCCTGCGGGTGGTCGCGCAGCCGGCCTGGAGCGCCGCGCGCGCGCGGGTGGTCGACGACGGCATGTCGTTC AGCCCGTGGCACGGGCTCGCCGCGCACCGCCCGCTCGGCGGCGTGATGCGCGCGCGCCGGCCCGCCTACGCACAGTCCGC GGCGTTCCGCGAACGGTTCAACGGCTGCCCGGTTCACGGCTGA
Upstream 100 bases:
>100_bases ACCGCGCCCGGCGCCGTGCGCAGCCGCGCCGGGCGCGGCCGACGGTGCCGGGCACGCGGCTTGCCTCTGCAGAGATTCCC ACCGCCGCGCGGAGATCGCG
Downstream 100 bases:
>100_bases GCCGCGCGGCCACTTGCCCAGGAGCATCGATCATGCACGACAGCCCCGATCCCAGCCCGCACCACGACGGCCTCGACGCC GAACCGGAGACCCGCAACGA
Product: Catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTAPLLTIQPLPFDPMFEQIPDDEADTVRELIDALHQIQQTAANDCGHALRSLHAKSHGLLDGELTVAEGLPPPLAQGVF ARRGSYRVTLRLSTTPGDLLDDAVSTPRGLALKLADVDGERLPGSEALRTQDFVMVNAPAFSAPTPKAFVRSLKLLAQTT GRAPGGKRALSAVMRGAERMLEAAGVPGAALKNLGGHPASHLLGETFYTCAPCLYGPYFAKLAVVPVSPELVALKGAPLD LKGRPDALRDEVVAFFARHGGVWELRVQLATDLERMPVEDASAVWPEDASPYLTVATLRVVAQPAWSAARARVVDDGMSF SPWHGLAAHRPLGGVMRARRPAYAQSAAFRERFNGCPVHG
Sequences:
>Translated_360_residues MTAPLLTIQPLPFDPMFEQIPDDEADTVRELIDALHQIQQTAANDCGHALRSLHAKSHGLLDGELTVAEGLPPPLAQGVF ARRGSYRVTLRLSTTPGDLLDDAVSTPRGLALKLADVDGERLPGSEALRTQDFVMVNAPAFSAPTPKAFVRSLKLLAQTT GRAPGGKRALSAVMRGAERMLEAAGVPGAALKNLGGHPASHLLGETFYTCAPCLYGPYFAKLAVVPVSPELVALKGAPLD LKGRPDALRDEVVAFFARHGGVWELRVQLATDLERMPVEDASAVWPEDASPYLTVATLRVVAQPAWSAARARVVDDGMSF SPWHGLAAHRPLGGVMRARRPAYAQSAAFRERFNGCPVHG >Mature_359_residues TAPLLTIQPLPFDPMFEQIPDDEADTVRELIDALHQIQQTAANDCGHALRSLHAKSHGLLDGELTVAEGLPPPLAQGVFA RRGSYRVTLRLSTTPGDLLDDAVSTPRGLALKLADVDGERLPGSEALRTQDFVMVNAPAFSAPTPKAFVRSLKLLAQTTG RAPGGKRALSAVMRGAERMLEAAGVPGAALKNLGGHPASHLLGETFYTCAPCLYGPYFAKLAVVPVSPELVALKGAPLDL KGRPDALRDEVVAFFARHGGVWELRVQLATDLERMPVEDASAVWPEDASPYLTVATLRVVAQPAWSAARARVVDDGMSFS PWHGLAAHRPLGGVMRARRPAYAQSAAFRERFNGCPVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020835 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase [H]
EC number: NA
Molecular weight: Translated: 38491; Mature: 38359
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLLTIQPLPFDPMFEQIPDDEADTVRELIDALHQIQQTAANDCGHALRSLHAKSHGL CCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDGELTVAEGLPPPLAQGVFARRGSYRVTLRLSTTPGDLLDDAVSTPRGLALKLADVDGE CCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCC RLPGSEALRTQDFVMVNAPAFSAPTPKAFVRSLKLLAQTTGRAPGGKRALSAVMRGAERM CCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LEAAGVPGAALKNLGGHPASHLLGETFYTCAPCLYGPYFAKLAVVPVSPELVALKGAPLD HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCEEEECCCCCC LKGRPDALRDEVVAFFARHGGVWELRVQLATDLERMPVEDASAVWPEDASPYLTVATLRV CCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH VAQPAWSAARARVVDDGMSFSPWHGLAAHRPLGGVMRARRPAYAQSAAFRERFNGCPVHG HHCCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAPLLTIQPLPFDPMFEQIPDDEADTVRELIDALHQIQQTAANDCGHALRSLHAKSHGL CCCCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDGELTVAEGLPPPLAQGVFARRGSYRVTLRLSTTPGDLLDDAVSTPRGLALKLADVDGE CCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCC RLPGSEALRTQDFVMVNAPAFSAPTPKAFVRSLKLLAQTTGRAPGGKRALSAVMRGAERM CCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LEAAGVPGAALKNLGGHPASHLLGETFYTCAPCLYGPYFAKLAVVPVSPELVALKGAPLD HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCEEEECCCCCC LKGRPDALRDEVVAFFARHGGVWELRVQLATDLERMPVEDASAVWPEDASPYLTVATLRV CCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH VAQPAWSAARARVVDDGMSFSPWHGLAAHRPLGGVMRARRPAYAQSAAFRERFNGCPVHG HHCCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]