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The map label for this gene is ydeP [H]

Identifier: 238027114

GI number: 238027114

Start: 1650831

End: 1653164

Strand: Reverse

Name: ydeP [H]

Synonym: bglu_1g14940

Alternate gene names: 238027114

Gene position: 1653164-1650831 (Counterclockwise)

Preceding gene: 238027115

Following gene: 238027113

Centisome position: 42.32

GC content: 71.38

Gene sequence:

>2334_bases
ATGCACGACAGCCCCGATCCCAGCCCGCACCACGACGGCCTCGACGCCGAACCGGAGACCCGCAACGACGCCTATCCGCA
TCCGGCGGGCGGATGGGGTTCGATGAAGGCGGTGGTGGCGATCCTCGCGAGCGAACACGCCGTGCGCAAGGGCGGCGCCG
CGCTGATGCGGCAGAACAAGCCCGACGGCTTCATGTGCGTGAGCTGCTCATGGGCCAAGCCGGCCGGCCCGCATCCGTTC
GAGTTCTGCGAGAACGGCGCGAAGGCGACCGCCTGGGACACCACCTCGAAGCGCGTCGGCGCCGACTTCTTCGCGGCGCA
TCCGCTCGCCGAACTCGAGACCTGGCACGACCATGATCTCGAGGCGGCCGGCCGGCTGACCGAGCCGCTGCGCTACGACG
CGGCCAGCGACCGCTACCTGCCGGTGAGCTGGCAGCAGGCGTTCGACGAGATCGGCCGCGAGCTGAACGCCATCGAGCCG
GCCCGCGCGGTGTTCTACTCGTCGGGCCGCGCCTCGCTGGAGACCTCCTACCTGCTGCAGCTGTTCGCGCGCCAGTACGG
CACCAACAACCTGCCCGACAGCTCGAACATGTGCCACGAGAGCAGCAGCGTCGGGCTGAAGGCGTCGATCGGCGTCGGCG
TCGGCACCATCGGCCTGGAGGACTTCGAGCAGACCGACCTGATGTTCTTCTTCGGCCAGAACGTCGGCACCAACAGCCCG
CGCATGCTGCACCCGCTGCAGGACGCGCGCCGCCGCGGCGTGCCGATCGTCACGTTCAACCCGCTGCGCGAGCCGGGCCT
GGTCGGCTTCGTCAATCCGCAGTCGCCGCGCGAGATGCTCACGCCGGGCGACACGCAGATTTCCACGCAGTACCACCAGC
TGCGCATCGGCGGCGACGGCGCCGCGCTGGCCGGGCTCTGCAAGGCCGTGATCGCGGCCGACGACGCGGCGCTCGCCGCG
GGCGCGCCGCGCGTGCTCGACGTGGCGTTCATCGAGGCGCACACGCGCGGCTTCGATGCGTTCGCGCAGCAGATGCGCGA
GACCGGCTGGGACGCGATCGAGCGCGAGAGCGGTCTCGCGCGCGCCGACCTCGAGCGCGCCGCCGCCCTCTACGCGCGCG
CGAACGCGGTGATCGTCCACTATGGCATGGGCATCACCCAGCACCGGCTCGGCGTGCAGAACGTGCGGATGATCTGCAAC
TTCCTGATGCTGCGCGGCAATCTCGGCAAGCCCGGCGCCGGCGTCTCGCCGATCCGCGGCCATTCGAACGTGCAGGGCCA
GCGCACCGTCGGCATCACCGAGAAACCCGAACTCGCGCCGCTCGACGTGCTGGCCCGCCAGTTCCGCTTCGAGCCGCCGC
GCGAGGCCGGCATGAACGTGGTGGAGGCGTTCGAGGCGATGCTCGAGGGGCGCCTCGACGCGGTGTTCAGTCTCGGCGGC
AACCTGCTGCGCTCGGCGCCGGACCGCGGCCGCATCGAGCCCGCGTGGCGGCGGCTGAGGCTGACCGTGAACGTCGCCAC
CAAGCTGAACCGCACGCATCTGCTGCCCGGCGCGGTGTCCTACCTGCTGCCGTGCCTGAGCCGCGTCGAGATCGACCGGC
AGGCGGGCGGCGCGCAGGCCGTGTCGATGGAGGACAGCACCGGCCGCATGCACGGCTCGCGCGGCGTGGTGGAGCCGGCC
GGCGAGGCGCTGCGCTCCGAGCCGTTCATCGTCGCGGAACTCGCCGCGGCGACGCTAGGCGCGCGCAGCACGGTGCCGTG
GAGCGCCTGGCGCAACGATTACCGGCTGATCCGCGAGGCGATCGCGCTGACCTACCCGGACATCTTCCACGACTTCGACG
CGCGGATGTGGACGCCCGGCGGCTTCGCGCGGCCGCTGGCGGCGCGCGAGCGGCGCTGGCAGACACCGAGCGGCAGGGCC
GAATTCGCGATGCTCGAATCGCTCGGCGCGGACCCCGACCTGGCCGCGCACGGTCCCGGCGTGCTGCGGCTGATGACGAT
GCGCGGCGACAGCCAGTTCAACACCACGATCTACAGCCTCGACGACCGGTTCCGCGGCATCTACGGCGACCGCATGGTGC
TGCTGATGCATCGCGACGACATCGCCGCGCACGGGCTCGAGGAAGGCCGGCGCATCACGCTGCAGACCGTGGCCGACGAC
GGCATCGAGCGGCGCGTGGCCGGCCTGAAGCCGGTGCCCTACGACATCCCGCGCGGCTGCGTAGCCGGCTACTACCCGGA
ATGCAACCCCTTGCTGCCGCTCTGGCATTACGCGAAGGACAGCAAGGTGCCGGGCGCGAAGTCGATTCCGGTGCGCATCG
TGGCGCCGGCCTGA

Upstream 100 bases:

>100_bases
GCCGGCCCGCCTACGCACAGTCCGCGGCGTTCCGCGAACGGTTCAACGGCTGCCCGGTTCACGGCTGAGCCGCGCGGCCA
CTTGCCCAGGAGCATCGATC

Downstream 100 bases:

>100_bases
GCGGCGCGCCGCGCGGCGGCACGCCGCTCATCCCTGTTGACGAGGAACCCCGCCATGACGCCGACCACTCCGGAACGTCC
CCCAGCCTGCGGCCCGCACC

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MHDSPDPSPHHDGLDAEPETRNDAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNKPDGFMCVSCSWAKPAGPHPF
EFCENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDLEAAGRLTEPLRYDAASDRYLPVSWQQAFDEIGRELNAIEP
ARAVFYSSGRASLETSYLLQLFARQYGTNNLPDSSNMCHESSSVGLKASIGVGVGTIGLEDFEQTDLMFFFGQNVGTNSP
RMLHPLQDARRRGVPIVTFNPLREPGLVGFVNPQSPREMLTPGDTQISTQYHQLRIGGDGAALAGLCKAVIAADDAALAA
GAPRVLDVAFIEAHTRGFDAFAQQMRETGWDAIERESGLARADLERAAALYARANAVIVHYGMGITQHRLGVQNVRMICN
FLMLRGNLGKPGAGVSPIRGHSNVQGQRTVGITEKPELAPLDVLARQFRFEPPREAGMNVVEAFEAMLEGRLDAVFSLGG
NLLRSAPDRGRIEPAWRRLRLTVNVATKLNRTHLLPGAVSYLLPCLSRVEIDRQAGGAQAVSMEDSTGRMHGSRGVVEPA
GEALRSEPFIVAELAAATLGARSTVPWSAWRNDYRLIREAIALTYPDIFHDFDARMWTPGGFARPLAARERRWQTPSGRA
EFAMLESLGADPDLAAHGPGVLRLMTMRGDSQFNTTIYSLDDRFRGIYGDRMVLLMHRDDIAAHGLEEGRRITLQTVADD
GIERRVAGLKPVPYDIPRGCVAGYYPECNPLLPLWHYAKDSKVPGAKSIPVRIVAPA

Sequences:

>Translated_777_residues
MHDSPDPSPHHDGLDAEPETRNDAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNKPDGFMCVSCSWAKPAGPHPF
EFCENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDLEAAGRLTEPLRYDAASDRYLPVSWQQAFDEIGRELNAIEP
ARAVFYSSGRASLETSYLLQLFARQYGTNNLPDSSNMCHESSSVGLKASIGVGVGTIGLEDFEQTDLMFFFGQNVGTNSP
RMLHPLQDARRRGVPIVTFNPLREPGLVGFVNPQSPREMLTPGDTQISTQYHQLRIGGDGAALAGLCKAVIAADDAALAA
GAPRVLDVAFIEAHTRGFDAFAQQMRETGWDAIERESGLARADLERAAALYARANAVIVHYGMGITQHRLGVQNVRMICN
FLMLRGNLGKPGAGVSPIRGHSNVQGQRTVGITEKPELAPLDVLARQFRFEPPREAGMNVVEAFEAMLEGRLDAVFSLGG
NLLRSAPDRGRIEPAWRRLRLTVNVATKLNRTHLLPGAVSYLLPCLSRVEIDRQAGGAQAVSMEDSTGRMHGSRGVVEPA
GEALRSEPFIVAELAAATLGARSTVPWSAWRNDYRLIREAIALTYPDIFHDFDARMWTPGGFARPLAARERRWQTPSGRA
EFAMLESLGADPDLAAHGPGVLRLMTMRGDSQFNTTIYSLDDRFRGIYGDRMVLLMHRDDIAAHGLEEGRRITLQTVADD
GIERRVAGLKPVPYDIPRGCVAGYYPECNPLLPLWHYAKDSKVPGAKSIPVRIVAPA
>Mature_777_residues
MHDSPDPSPHHDGLDAEPETRNDAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNKPDGFMCVSCSWAKPAGPHPF
EFCENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDLEAAGRLTEPLRYDAASDRYLPVSWQQAFDEIGRELNAIEP
ARAVFYSSGRASLETSYLLQLFARQYGTNNLPDSSNMCHESSSVGLKASIGVGVGTIGLEDFEQTDLMFFFGQNVGTNSP
RMLHPLQDARRRGVPIVTFNPLREPGLVGFVNPQSPREMLTPGDTQISTQYHQLRIGGDGAALAGLCKAVIAADDAALAA
GAPRVLDVAFIEAHTRGFDAFAQQMRETGWDAIERESGLARADLERAAALYARANAVIVHYGMGITQHRLGVQNVRMICN
FLMLRGNLGKPGAGVSPIRGHSNVQGQRTVGITEKPELAPLDVLARQFRFEPPREAGMNVVEAFEAMLEGRLDAVFSLGG
NLLRSAPDRGRIEPAWRRLRLTVNVATKLNRTHLLPGAVSYLLPCLSRVEIDRQAGGAQAVSMEDSTGRMHGSRGVVEPA
GEALRSEPFIVAELAAATLGARSTVPWSAWRNDYRLIREAIALTYPDIFHDFDARMWTPGGFARPLAARERRWQTPSGRA
EFAMLESLGADPDLAAHGPGVLRLMTMRGDSQFNTTIYSLDDRFRGIYGDRMVLLMHRDDIAAHGLEEGRRITLQTVADD
GIERRVAGLKPVPYDIPRGCVAGYYPECNPLLPLWHYAKDSKVPGAKSIPVRIVAPA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=758, Percent_Identity=47.2295514511873, Blast_Score=680, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=420, Percent_Identity=26.9047619047619, Blast_Score=146, Evalue=5e-36,
Organism=Escherichia coli, GI3868719, Length=496, Percent_Identity=21.1693548387097, Blast_Score=90, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84852; Mature: 84852

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDSPDPSPHHDGLDAEPETRNDAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDGFMCVSCSWAKPAGPHPFEFCENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDL
CCCEEEEEECCCCCCCCCCHHHHCCCCCEEECCCCHHHCCCHHHHHCCHHHHHCCCCCCH
EAAGRLTEPLRYDAASDRYLPVSWQQAFDEIGRELNAIEPARAVFYSSGRASLETSYLLQ
HHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
LFARQYGTNNLPDSSNMCHESSSVGLKASIGVGVGTIGLEDFEQTDLMFFFGQNVGTNSP
HHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCCC
RMLHPLQDARRRGVPIVTFNPLREPGLVGFVNPQSPREMLTPGDTQISTQYHQLRIGGDG
CEECCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHHHCCCCCCEEECEEEEEEECCCC
AALAGLCKAVIAADDAALAAGAPRVLDVAFIEAHTRGFDAFAQQMRETGWDAIERESGLA
HHHHHHHHHHHHCCCHHHHCCCCHHEEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHCCCH
RADLERAAALYARANAVIVHYGMGITQHRLGVQNVRMICNFLMLRGNLGKPGAGVSPIRG
HHHHHHHHHHHHHCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
HSNVQGQRTVGITEKPELAPLDVLARQFRFEPPREAGMNVVEAFEAMLEGRLDAVFSLGG
CCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCC
NLLRSAPDRGRIEPAWRRLRLTVNVATKLNRTHLLPGAVSYLLPCLSRVEIDRQAGGAQA
HHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
VSMEDSTGRMHGSRGVVEPAGEALRSEPFIVAELAAATLGARSTVPWSAWRNDYRLIREA
EEECCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IALTYPDIFHDFDARMWTPGGFARPLAARERRWQTPSGRAEFAMLESLGADPDLAAHGPG
HHHHCCHHHHCCCCCEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
VLRLMTMRGDSQFNTTIYSLDDRFRGIYGDRMVLLMHRDDIAAHGLEEGRRITLQTVADD
EEEEEEECCCCCCCCEEEECCHHHCCCCCCEEEEEEECCCHHHCCCCCCCEEEEEEHHCC
GIERRVAGLKPVPYDIPRGCVAGYYPECNPLLPLWHYAKDSKVPGAKSIPVRIVAPA
CHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MHDSPDPSPHHDGLDAEPETRNDAYPHPAGGWGSMKAVVAILASEHAVRKGGAALMRQNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCC
PDGFMCVSCSWAKPAGPHPFEFCENGAKATAWDTTSKRVGADFFAAHPLAELETWHDHDL
CCCEEEEEECCCCCCCCCCHHHHCCCCCEEECCCCHHHCCCHHHHHCCHHHHHCCCCCCH
EAAGRLTEPLRYDAASDRYLPVSWQQAFDEIGRELNAIEPARAVFYSSGRASLETSYLLQ
HHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
LFARQYGTNNLPDSSNMCHESSSVGLKASIGVGVGTIGLEDFEQTDLMFFFGQNVGTNSP
HHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCEEEEECCCCCCCCC
RMLHPLQDARRRGVPIVTFNPLREPGLVGFVNPQSPREMLTPGDTQISTQYHQLRIGGDG
CEECCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHHHCCCCCCEEECEEEEEEECCCC
AALAGLCKAVIAADDAALAAGAPRVLDVAFIEAHTRGFDAFAQQMRETGWDAIERESGLA
HHHHHHHHHHHHCCCHHHHCCCCHHEEEEEHHHHHCCHHHHHHHHHHCCCHHHHHHCCCH
RADLERAAALYARANAVIVHYGMGITQHRLGVQNVRMICNFLMLRGNLGKPGAGVSPIRG
HHHHHHHHHHHHHCCEEEEEECCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
HSNVQGQRTVGITEKPELAPLDVLARQFRFEPPREAGMNVVEAFEAMLEGRLDAVFSLGG
CCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCC
NLLRSAPDRGRIEPAWRRLRLTVNVATKLNRTHLLPGAVSYLLPCLSRVEIDRQAGGAQA
HHHHCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
VSMEDSTGRMHGSRGVVEPAGEALRSEPFIVAELAAATLGARSTVPWSAWRNDYRLIREA
EEECCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IALTYPDIFHDFDARMWTPGGFARPLAARERRWQTPSGRAEFAMLESLGADPDLAAHGPG
HHHHCCHHHHCCCCCEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
VLRLMTMRGDSQFNTTIYSLDDRFRGIYGDRMVLLMHRDDIAAHGLEEGRRITLQTVADD
EEEEEEECCCCCCCCEEEECCHHHCCCCCCEEEEEEECCCHHHCCCCCCCEEEEEEHHCC
GIERRVAGLKPVPYDIPRGCVAGYYPECNPLLPLWHYAKDSKVPGAKSIPVRIVAPA
CHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]