| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027101
Identifier: 238027101
GI number: 238027101
Start: 1634589
End: 1635734
Strand: Reverse
Name: 238027101
Synonym: bglu_1g14810
Alternate gene names: NA
Gene position: 1635734-1634589 (Counterclockwise)
Preceding gene: 238027102
Following gene: 238027099
Centisome position: 41.87
GC content: 69.98
Gene sequence:
>1146_bases ATGGCCGCCGTGGCCGGCGTGCTGGTCGGCAACGCGGCCTTCGTGGCGCCCGCCTTTTCGCAGGCCCCGGCCTGCGCCGT GTCGGCGCACGGCCGCTCGGTCACCTTGCGGGCGAAGGGCGTCAACGGCGAGCCGTTCTCGGTCGCGCGGGGCTACCATC TGTCGGTCCGGGTCAACGGCGGCGAGCCGGCCAGCGTGCTGGTGGACACCGGCTCGAACGCGCTGGTGGTTCCCGCCTGG CGCGTCAAGGGCTTCCCCGCCGACCCGGAGCACGACAGCAGCGGCCTGGTGATCTCGGGCAAGCTGCCCTACCACTACTC GAGCAGCGGCAATGCCTACTTCGGCTACCTGATCCAGGCTCCGGTCACGGTGCAGGGGGACCAGGACACCTCGCTCGAGG CCGAGAACGTGCAGGTGCTCGCCATCACCGAAGTCTGCGGCTCGCACGCGAGCTGCCAGCCCGCCACGCCCGCCAACAGC CGCACCCTGGGCATGATGGGCGTGGGCTTCCAGCCGACGCCGACGCTGCGGGTCAATACCGCCGGCGGCACCACGCCGGC CACTCGCACCAACGTCTTCGAGCAAGTGCCGCGCGTGCAAACGCAGGGCTGGATCTTCGAGCCCGACGGCCGCATCGTGG TCGGCCTCAACGCCGACACGACCAAGGAATTCACGCATTGGGCACCGATGCTTGCCGATCGCCAGGGCGGACTCTCGCCC GAAGGCTGCGTGATCGTGAAGGAGCCGGGCCAGCCGGCGTCGCAGCCGCGGTGCGGCACCATGCTGCTGGATACCGGCAT GTCCACCATGAACCTGTGGGCCTATCGCGGCGACGCGGGGCAGGCGCCGCTGTGCCCGCCGAAGCCGGCCGGCGCGGGCA AGAAGTCCGGCTTCAACGGCGCGACCTTCCCGGCCAACACGCTGATCACGCTCACCTCGCCGGGCCAGGCGCTGACTGTC GACTATCAATTCAATACCAGCGCGCCACGGCAGGCGGGCACGCCGACGCAGACCTACTGCACCAACGTCGAGGGCAGCTC GCCCACCGAGAACGCATTCTTCAACACCGGGCGCATGCCGCTCGAACGCTACGGCTTCGCCCGCAACCAGAGCTGCGCAA CGTTCGCCTACCGGCGCGCGCAATAA
Upstream 100 bases:
>100_bases GCACCGGCTCGCGAGCGGGCGCGGCGAGCCGAGACCGCCCGTTCCTGCCATGCCTGAATCGCGCCGCCGTGCCGCGGCCA CGCGGGCCAAGGCCGCCCGC
Downstream 100 bases:
>100_bases GCAGGCTTCACGCAAACGGGCACCAAGGGCGGCGCGGCGCTGCCCTTCGCCGCGGCCAACGCCCGCCCGGCCCGCGTTCG CGTAGTCAGCGCATGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MAAVAGVLVGNAAFVAPAFSQAPACAVSAHGRSVTLRAKGVNGEPFSVARGYHLSVRVNGGEPASVLVDTGSNALVVPAW RVKGFPADPEHDSSGLVISGKLPYHYSSSGNAYFGYLIQAPVTVQGDQDTSLEAENVQVLAITEVCGSHASCQPATPANS RTLGMMGVGFQPTPTLRVNTAGGTTPATRTNVFEQVPRVQTQGWIFEPDGRIVVGLNADTTKEFTHWAPMLADRQGGLSP EGCVIVKEPGQPASQPRCGTMLLDTGMSTMNLWAYRGDAGQAPLCPPKPAGAGKKSGFNGATFPANTLITLTSPGQALTV DYQFNTSAPRQAGTPTQTYCTNVEGSSPTENAFFNTGRMPLERYGFARNQSCATFAYRRAQ
Sequences:
>Translated_381_residues MAAVAGVLVGNAAFVAPAFSQAPACAVSAHGRSVTLRAKGVNGEPFSVARGYHLSVRVNGGEPASVLVDTGSNALVVPAW RVKGFPADPEHDSSGLVISGKLPYHYSSSGNAYFGYLIQAPVTVQGDQDTSLEAENVQVLAITEVCGSHASCQPATPANS RTLGMMGVGFQPTPTLRVNTAGGTTPATRTNVFEQVPRVQTQGWIFEPDGRIVVGLNADTTKEFTHWAPMLADRQGGLSP EGCVIVKEPGQPASQPRCGTMLLDTGMSTMNLWAYRGDAGQAPLCPPKPAGAGKKSGFNGATFPANTLITLTSPGQALTV DYQFNTSAPRQAGTPTQTYCTNVEGSSPTENAFFNTGRMPLERYGFARNQSCATFAYRRAQ >Mature_380_residues AAVAGVLVGNAAFVAPAFSQAPACAVSAHGRSVTLRAKGVNGEPFSVARGYHLSVRVNGGEPASVLVDTGSNALVVPAWR VKGFPADPEHDSSGLVISGKLPYHYSSSGNAYFGYLIQAPVTVQGDQDTSLEAENVQVLAITEVCGSHASCQPATPANSR TLGMMGVGFQPTPTLRVNTAGGTTPATRTNVFEQVPRVQTQGWIFEPDGRIVVGLNADTTKEFTHWAPMLADRQGGLSPE GCVIVKEPGQPASQPRCGTMLLDTGMSTMNLWAYRGDAGQAPLCPPKPAGAGKKSGFNGATFPANTLITLTSPGQALTVD YQFNTSAPRQAGTPTQTYCTNVEGSSPTENAFFNTGRMPLERYGFARNQSCATFAYRRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39947; Mature: 39816
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS00136 SUBTILASE_ASP ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVAGVLVGNAAFVAPAFSQAPACAVSAHGRSVTLRAKGVNGEPFSVARGYHLSVRVNG CCCEEEEEECCCEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCEEEEEEECC GEPASVLVDTGSNALVVPAWRVKGFPADPEHDSSGLVISGKLPYHYSSSGNAYFGYLIQA CCCEEEEEECCCCEEEEEEHEECCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEEEEC PVTVQGDQDTSLEAENVQVLAITEVCGSHASCQPATPANSRTLGMMGVGFQPTPTLRVNT CEEEECCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC AGGTTPATRTNVFEQVPRVQTQGWIFEPDGRIVVGLNADTTKEFTHWAPMLADRQGGLSP CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCC EGCVIVKEPGQPASQPRCGTMLLDTGMSTMNLWAYRGDAGQAPLCPPKPAGAGKKSGFNG CCEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC ATFPANTLITLTSPGQALTVDYQFNTSAPRQAGTPTQTYCTNVEGSSPTENAFFNTGRMP CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCEEECCCCC LERYGFARNQSCATFAYRRAQ HHHHCCCCCCCHHEEEEECCC >Mature Secondary Structure AAVAGVLVGNAAFVAPAFSQAPACAVSAHGRSVTLRAKGVNGEPFSVARGYHLSVRVNG CCEEEEEECCCEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCEEEEEEECC GEPASVLVDTGSNALVVPAWRVKGFPADPEHDSSGLVISGKLPYHYSSSGNAYFGYLIQA CCCEEEEEECCCCEEEEEEHEECCCCCCCCCCCCCEEEECCCCEEECCCCCEEEEEEEEC PVTVQGDQDTSLEAENVQVLAITEVCGSHASCQPATPANSRTLGMMGVGFQPTPTLRVNT CEEEECCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEC AGGTTPATRTNVFEQVPRVQTQGWIFEPDGRIVVGLNADTTKEFTHWAPMLADRQGGLSP CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCC EGCVIVKEPGQPASQPRCGTMLLDTGMSTMNLWAYRGDAGQAPLCPPKPAGAGKKSGFNG CCEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC ATFPANTLITLTSPGQALTVDYQFNTSAPRQAGTPTQTYCTNVEGSSPTENAFFNTGRMP CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCEEECCCCC LERYGFARNQSCATFAYRRAQ HHHHCCCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA