| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027099
Identifier: 238027099
GI number: 238027099
Start: 1630459
End: 1632306
Strand: Reverse
Name: 238027099
Synonym: bglu_1g14790
Alternate gene names: NA
Gene position: 1632306-1630459 (Counterclockwise)
Preceding gene: 238027101
Following gene: 238027098
Centisome position: 41.78
GC content: 68.51
Gene sequence:
>1848_bases ATGTCAACGCTTCGCAAACGCCGCCTGACGCTCACCGCCATGGCGCTCGCCTCGATCACGGCCGCGCTGGGCGCATGCGG CGACGGCGACGGCGGCCCGGCCGCCGGCGCCGTCTTCAAGCAGGCCGCCGCCGGCCGGTTCGCCACCTCGAACACGCCGA ACTTCGGCCCGAACGTGGTGGTGTTCGACCCGGGCATGTCGAGCGCATCGATCCAGTCCCGGCTCGACAATGCCTTCAAT TCGCAGTTGCTCAGCCCCACCGCGCAATTCGGCTCGCAGCGCTACGCGTTCCTGTTCAAGCCGGGCAGCTACAGCAACAT CAACGCGAACGTCGGCTTCTACACCTCGATCGCCGGCCTCGGACGCAACCCGGACGACACCGGGATCAGCGGCAGCATCA ACGTGGACAGCGGCTGGAACTACGGCGACCAGGCGAACGCCACGCAGAACTTCTGGCGCTCGGTGGAAAACCTCGCGGTC ACGCCGAATGGCGGCACCGATCGCTGGGCGGTCTCGCAGGCGGCACCGATGCGCCGCGTCCATATCCGCGGCAACCTGAC GCTCGGCCCGTCGAACCAGGGCGACGGCCGAGGCTACTCGAGCGGCGGCTTCATCGCCGACAGCAAGATCGACGGCACGG TGTCGTCGGGCTCGCAGCAGCAGTGGTACACGCGCGACAGCACGATCGGCGGCTGGACCAACGGAGTCTGGAACATGGTG TTCTCGGGCGTGAGCGGCGCCCCGGCGCAGTCGTTCCCGGCCACCTGGAACGCCGCGCCGCCCTACACCACGCTCGCCAC CACGCCGGTCTCGCGTGAAAAGCCGTATCTCTACATCGACGGCGCGGGCAACTACAACGTATTCCTGCCCTCGCTGCGCA CCAACGCCAGCGCCATCACGTGGGGCGCGGGGCCCACGCCGGGCACCTCGATTCCGATGAGCCGGTTCTATGTCGCGCAG CCGACCGACACGGCGGCCACGCTCAACGCGGCGCTGCAGCAGGGCCTGAACCTGTTCTTCACCCCCGGCACCTACCACCT GAGCCAGGCCATCGCGATCACGCGCGCCGGCACGGTGGTGCTCGGCATCGGCTTCCCGACGCTGACGCCCGACAACGGCA GCAACGCAATGACGGTGGCCGACGTCAACGGCGTCAGGATCGCCGGCCTGCTGTTCGACGCGGGCACGGTCAACAGCGGC GCGCTGCTGACGGTGGGCACGGCCGGCTCGGCGGCCAGCCACGCGAGCGATCCGGTCAGCGTGCAGGACGTGTACTTCCG CATCGGCGGCGCGCAGGCCGGCAAGGCCACCAACAGCCTGGTGGTGAACGCCAACGACACGCTGATCGACCACATCTGGG CATGGCGCGCCGATCACGGCTCGGCGCCCACCGGCTGGACCGTCAACACGGCCGACACCGGCCTCGTCGTGAACGGTGCG AACGTGCTCGCCACGGGCCTCTTCGTCGAGCACTACCAGAAGTACAACGTGCTGTGGAACGGCCAGAACGGCAGGACCAT CTTCTTCCAGAACGAGCTGCCGTATGACGTGCCGAACCAGGCGTCGTGGCTCAGCCCGGCCGGCAACGGCTACGCGGCCT ACAAGGTGGCGGACGGCGTGACGAGCCACCAGACCTGGGGCATGGGCAGCTACTGCTTCTTCAACGTCAATCCGTCGGTC AACGCGCTGCATGGCTTCGAGGTGCCGCAGACCGCCGGCGTGAGGCTGCACGACACGCTCACCGTGTCGCTCGGCGGGGT CGGCAGCATCACCCATGTCGTCAACAACGCGGGCGCGCAGGCGGCCGGCGCCTCGACGATTCCGGTGAACCTGGTCAGCT ATCCGTGA
Upstream 100 bases:
>100_bases CCACTATGACTCGCACCCGGTCCGGGCACGCTGAAGGCCCGGAATACTGACGTGAAAAAGCGCCGGCAATTTCGCGCTTT TCAAACACCGAGGAGTTCAT
Downstream 100 bases:
>100_bases CGGCGGCCGCCGCGCCGGGCGCGTCCTCGTGCTAGGCTGCCTCGACACCGCATCGAGGTACGCCATGGACACCCCGCGAT ACGAGATTTTCGAGGAAGAC
Product: Secreted protein
Products: NA
Alternate protein names: Coagulation Factor 5/8 Type Domain Protein; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycoside Hydrolase Family; Coagulation Factor 5/8 Type; Endo-Beta-1 3-Glucanase; Fibronectin Type III Domain-Containing Protein; S-Layer Domain Protein; S-Layer Domain-Containing Protein; Ricin B Lectin
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSTLRKRRLTLTAMALASITAALGACGDGDGGPAAGAVFKQAAAGRFATSNTPNFGPNVVVFDPGMSSASIQSRLDNAFN SQLLSPTAQFGSQRYAFLFKPGSYSNINANVGFYTSIAGLGRNPDDTGISGSINVDSGWNYGDQANATQNFWRSVENLAV TPNGGTDRWAVSQAAPMRRVHIRGNLTLGPSNQGDGRGYSSGGFIADSKIDGTVSSGSQQQWYTRDSTIGGWTNGVWNMV FSGVSGAPAQSFPATWNAAPPYTTLATTPVSREKPYLYIDGAGNYNVFLPSLRTNASAITWGAGPTPGTSIPMSRFYVAQ PTDTAATLNAALQQGLNLFFTPGTYHLSQAIAITRAGTVVLGIGFPTLTPDNGSNAMTVADVNGVRIAGLLFDAGTVNSG ALLTVGTAGSAASHASDPVSVQDVYFRIGGAQAGKATNSLVVNANDTLIDHIWAWRADHGSAPTGWTVNTADTGLVVNGA NVLATGLFVEHYQKYNVLWNGQNGRTIFFQNELPYDVPNQASWLSPAGNGYAAYKVADGVTSHQTWGMGSYCFFNVNPSV NALHGFEVPQTAGVRLHDTLTVSLGGVGSITHVVNNAGAQAAGASTIPVNLVSYP
Sequences:
>Translated_615_residues MSTLRKRRLTLTAMALASITAALGACGDGDGGPAAGAVFKQAAAGRFATSNTPNFGPNVVVFDPGMSSASIQSRLDNAFN SQLLSPTAQFGSQRYAFLFKPGSYSNINANVGFYTSIAGLGRNPDDTGISGSINVDSGWNYGDQANATQNFWRSVENLAV TPNGGTDRWAVSQAAPMRRVHIRGNLTLGPSNQGDGRGYSSGGFIADSKIDGTVSSGSQQQWYTRDSTIGGWTNGVWNMV FSGVSGAPAQSFPATWNAAPPYTTLATTPVSREKPYLYIDGAGNYNVFLPSLRTNASAITWGAGPTPGTSIPMSRFYVAQ PTDTAATLNAALQQGLNLFFTPGTYHLSQAIAITRAGTVVLGIGFPTLTPDNGSNAMTVADVNGVRIAGLLFDAGTVNSG ALLTVGTAGSAASHASDPVSVQDVYFRIGGAQAGKATNSLVVNANDTLIDHIWAWRADHGSAPTGWTVNTADTGLVVNGA NVLATGLFVEHYQKYNVLWNGQNGRTIFFQNELPYDVPNQASWLSPAGNGYAAYKVADGVTSHQTWGMGSYCFFNVNPSV NALHGFEVPQTAGVRLHDTLTVSLGGVGSITHVVNNAGAQAAGASTIPVNLVSYP >Mature_614_residues STLRKRRLTLTAMALASITAALGACGDGDGGPAAGAVFKQAAAGRFATSNTPNFGPNVVVFDPGMSSASIQSRLDNAFNS QLLSPTAQFGSQRYAFLFKPGSYSNINANVGFYTSIAGLGRNPDDTGISGSINVDSGWNYGDQANATQNFWRSVENLAVT PNGGTDRWAVSQAAPMRRVHIRGNLTLGPSNQGDGRGYSSGGFIADSKIDGTVSSGSQQQWYTRDSTIGGWTNGVWNMVF SGVSGAPAQSFPATWNAAPPYTTLATTPVSREKPYLYIDGAGNYNVFLPSLRTNASAITWGAGPTPGTSIPMSRFYVAQP TDTAATLNAALQQGLNLFFTPGTYHLSQAIAITRAGTVVLGIGFPTLTPDNGSNAMTVADVNGVRIAGLLFDAGTVNSGA LLTVGTAGSAASHASDPVSVQDVYFRIGGAQAGKATNSLVVNANDTLIDHIWAWRADHGSAPTGWTVNTADTGLVVNGAN VLATGLFVEHYQKYNVLWNGQNGRTIFFQNELPYDVPNQASWLSPAGNGYAAYKVADGVTSHQTWGMGSYCFFNVNPSVN ALHGFEVPQTAGVRLHDTLTVSLGGVGSITHVVNNAGAQAAGASTIPVNLVSYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64097; Mature: 63965
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLRKRRLTLTAMALASITAALGACGDGDGGPAAGAVFKQAAAGRFATSNTPNFGPNVV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE VFDPGMSSASIQSRLDNAFNSQLLSPTAQFGSQRYAFLFKPGSYSNINANVGFYTSIAGL EECCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCEECCCCEEEEHHHC GRNPDDTGISGSINVDSGWNYGDQANATQNFWRSVENLAVTPNGGTDRWAVSQAAPMRRV CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCEEECCCCCCEEE HIRGNLTLGPSNQGDGRGYSSGGFIADSKIDGTVSSGSQQQWYTRDSTIGGWTNGVWNMV EEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH FSGVSGAPAQSFPATWNAAPPYTTLATTPVSREKPYLYIDGAGNYNVFLPSLRTNASAIT HCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCEEE WGAGPTPGTSIPMSRFYVAQPTDTAATLNAALQQGLNLFFTPGTYHLSQAIAITRAGTVV ECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHEEEEEECCEEE LGIGFPTLTPDNGSNAMTVADVNGVRIAGLLFDAGTVNSGALLTVGTAGSAASHASDPVS EEECCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCE VQDVYFRIGGAQAGKATNSLVVNANDTLIDHIWAWRADHGSAPTGWTVNTADTGLVVNGA EEEEEEEECCCCCCCCCCEEEEECCCCEEHHHHEEECCCCCCCCCCEEECCCCCEEEECC NVLATGLFVEHYQKYNVLWNGQNGRTIFFQNELPYDVPNQASWLSPAGNGYAAYKVADGV HHHHHHHHHHHHEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCC TSHQTWGMGSYCFFNVNPSVNALHGFEVPQTAGVRLHDTLTVSLGGVGSITHVVNNAGAQ CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCC AAGASTIPVNLVSYP CCCCCCCEEEEECCC >Mature Secondary Structure STLRKRRLTLTAMALASITAALGACGDGDGGPAAGAVFKQAAAGRFATSNTPNFGPNVV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE VFDPGMSSASIQSRLDNAFNSQLLSPTAQFGSQRYAFLFKPGSYSNINANVGFYTSIAGL EECCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCEECCCCEEEEHHHC GRNPDDTGISGSINVDSGWNYGDQANATQNFWRSVENLAVTPNGGTDRWAVSQAAPMRRV CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCEEECCCCCCEEE HIRGNLTLGPSNQGDGRGYSSGGFIADSKIDGTVSSGSQQQWYTRDSTIGGWTNGVWNMV EEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH FSGVSGAPAQSFPATWNAAPPYTTLATTPVSREKPYLYIDGAGNYNVFLPSLRTNASAIT HCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCEEE WGAGPTPGTSIPMSRFYVAQPTDTAATLNAALQQGLNLFFTPGTYHLSQAIAITRAGTVV ECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHEEEEEECCEEE LGIGFPTLTPDNGSNAMTVADVNGVRIAGLLFDAGTVNSGALLTVGTAGSAASHASDPVS EEECCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCE VQDVYFRIGGAQAGKATNSLVVNANDTLIDHIWAWRADHGSAPTGWTVNTADTGLVVNGA EEEEEEEECCCCCCCCCCEEEEECCCCEEHHHHEEECCCCCCCCCCEEECCCCCEEEECC NVLATGLFVEHYQKYNVLWNGQNGRTIFFQNELPYDVPNQASWLSPAGNGYAAYKVADGV HHHHHHHHHHHHEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCC TSHQTWGMGSYCFFNVNPSVNALHGFEVPQTAGVRLHDTLTVSLGGVGSITHVVNNAGAQ CCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHCCCCC AAGASTIPVNLVSYP CCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA