| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is mtrA [H]
Identifier: 238027096
GI number: 238027096
Start: 1625733
End: 1626797
Strand: Reverse
Name: mtrA [H]
Synonym: bglu_1g14750
Alternate gene names: 238027096
Gene position: 1626797-1625733 (Counterclockwise)
Preceding gene: 238027097
Following gene: 238027089
Centisome position: 41.64
GC content: 66.2
Gene sequence:
>1065_bases ATGAAAGTCGCCATTCTCGGCGGTCCGGCGAATCAAACGAAGCAGCTTGAACTGTGGTTGAAAAGCGGCGGGCATCAGCC CGAATTCTTCAAGACCGGCAACGCCTTTTTCAACGCGCTCAGGCGCAGCGGCTACGATCTGCTGATGGTCGACGTCGCCC TGCCCGACCTGTCCGGCATCGACCTGATCGCCTGGGCGCGCCACCATTTCGAATGGCATGTGCCGGTCATCGCGATGACG GCGCGCGAGGCATGGCACCTGGCTGGCGACGCGCTGAAAGCCGGTGCCGACGATTATCTGCTCAGGCCGGTTCGCGAAGC CGAGATTCAGTCGCGTATCAACACGGTCACGCTGCGGCAGGCGCAGCAGCCCGGCGACGTGATCGAGATCGGCGATTATT CGATCGATACCAAGAGCACCAGGATCATCCTGAACGGCGAGCCGATCAATCTGACTCGCAAGGAATTCGAGCTGGCCGCG TATTTCTTCCGGCATCCCGATCAGCTGATTTCGCATGACACGCTGCTCGGCCGGATCTGGAAACTGCAGAGCGATATCGA TACGCGCACGGTGGCCACCCACGTCAGCCGGATTCGCAAGAAACTGCGGCTGGACGGCTCGCACGGCTGCGAGATCCTGT CGCTCTACGGCTATGGTTATCGCTGCCTGATCGACCGGCCGGCCGAGGCGCCCGCCGCCGCCGCGAACGACCGCGCGTTC GCGCCGCCCGCCGCCGAGACGGGCGTGCCCCCGATCGAGCTGAGCCAGGCAGCATCGCATCCGGACGCTCCCGCAGCCGG CGGCCCGCTCGCAACGCCGGCGATGTCGGCGGCCGAGACGGACGCCATGGCGGGCGCCGCCGAGACGTGGCGCGACGGGG TGCGGCCCGTCGATCGCTATGTCGCGAACCTGTTGAAGGAGCGGCAGGATTTCGAGGAGCAGATCCGCCGGCTGCGCGAT GCGTTCTGCGAGGCCACGCTCGAGCTGCGCGCGCTGAAGCGCCAGGGCCCGCGCCGGCATCACGAGATCGCAGCGCTCGC CGACTACAGCGAGGACCTCGCCTGA
Upstream 100 bases:
>100_bases TCGTTACAAATTACGACGAGGGCAAATTTACCGAGACGGGATACTGCGGAAACAGCACGCATCTGTCACCGAGTCAGCAT CCATCACGAGGCGAGAACCG
Downstream 100 bases:
>100_bases GCCCCGGCCCCGGGTCCGGGGCCGAACCGAAAAGCTTTGCCCGCGGCCCGGCACACGCGGCCGCAGCGGCCGCAGCGGCC GGCACGGCACGCCGAACGAC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKVAILGGPANQTKQLELWLKSGGHQPEFFKTGNAFFNALRRSGYDLLMVDVALPDLSGIDLIAWARHHFEWHVPVIAMT AREAWHLAGDALKAGADDYLLRPVREAEIQSRINTVTLRQAQQPGDVIEIGDYSIDTKSTRIILNGEPINLTRKEFELAA YFFRHPDQLISHDTLLGRIWKLQSDIDTRTVATHVSRIRKKLRLDGSHGCEILSLYGYGYRCLIDRPAEAPAAAANDRAF APPAAETGVPPIELSQAASHPDAPAAGGPLATPAMSAAETDAMAGAAETWRDGVRPVDRYVANLLKERQDFEEQIRRLRD AFCEATLELRALKRQGPRRHHEIAALADYSEDLA
Sequences:
>Translated_354_residues MKVAILGGPANQTKQLELWLKSGGHQPEFFKTGNAFFNALRRSGYDLLMVDVALPDLSGIDLIAWARHHFEWHVPVIAMT AREAWHLAGDALKAGADDYLLRPVREAEIQSRINTVTLRQAQQPGDVIEIGDYSIDTKSTRIILNGEPINLTRKEFELAA YFFRHPDQLISHDTLLGRIWKLQSDIDTRTVATHVSRIRKKLRLDGSHGCEILSLYGYGYRCLIDRPAEAPAAAANDRAF APPAAETGVPPIELSQAASHPDAPAAGGPLATPAMSAAETDAMAGAAETWRDGVRPVDRYVANLLKERQDFEEQIRRLRD AFCEATLELRALKRQGPRRHHEIAALADYSEDLA >Mature_354_residues MKVAILGGPANQTKQLELWLKSGGHQPEFFKTGNAFFNALRRSGYDLLMVDVALPDLSGIDLIAWARHHFEWHVPVIAMT AREAWHLAGDALKAGADDYLLRPVREAEIQSRINTVTLRQAQQPGDVIEIGDYSIDTKSTRIILNGEPINLTRKEFELAA YFFRHPDQLISHDTLLGRIWKLQSDIDTRTVATHVSRIRKKLRLDGSHGCEILSLYGYGYRCLIDRPAEAPAAAANDRAF APPAAETGVPPIELSQAASHPDAPAAGGPLATPAMSAAETDAMAGAAETWRDGVRPVDRYVANLLKERQDFEEQIRRLRD AFCEATLELRALKRQGPRRHHEIAALADYSEDLA
Specific function: Member of the two-component regulatory system mtrA/mtrB [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=204, Percent_Identity=32.3529411764706, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1790860, Length=207, Percent_Identity=31.8840579710145, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=28.125, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=25.9090909090909, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789402, Length=201, Percent_Identity=27.8606965174129, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1789809, Length=214, Percent_Identity=27.5700934579439, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786911, Length=182, Percent_Identity=29.1208791208791, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788394, Length=208, Percent_Identity=26.4423076923077, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=24.5454545454545, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87082012, Length=202, Percent_Identity=26.2376237623762, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787229, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 39268; Mature: 39268
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAILGGPANQTKQLELWLKSGGHQPEFFKTGNAFFNALRRSGYDLLMVDVALPDLSGI CEEEEECCCCCCCHHEEEHHHCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCC DLIAWARHHFEWHVPVIAMTAREAWHLAGDALKAGADDYLLRPVREAEIQSRINTVTLRQ HHHHHHHHCCEEECCEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHEEHH AQQPGDVIEIGDYSIDTKSTRIILNGEPINLTRKEFELAAYFFRHPDQLISHDTLLGRIW CCCCCCEEEECCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH KLQSDIDTRTVATHVSRIRKKLRLDGSHGCEILSLYGYGYRCLIDRPAEAPAAAANDRAF HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCC APPAAETGVPPIELSQAASHPDAPAAGGPLATPAMSAAETDAMAGAAETWRDGVRPVDRY CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHH VANLLKERQDFEEQIRRLRDAFCEATLELRALKRQGPRRHHEIAALADYSEDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVAILGGPANQTKQLELWLKSGGHQPEFFKTGNAFFNALRRSGYDLLMVDVALPDLSGI CEEEEECCCCCCCHHEEEHHHCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCC DLIAWARHHFEWHVPVIAMTAREAWHLAGDALKAGADDYLLRPVREAEIQSRINTVTLRQ HHHHHHHHCCEEECCEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHEEHH AQQPGDVIEIGDYSIDTKSTRIILNGEPINLTRKEFELAAYFFRHPDQLISHDTLLGRIW CCCCCCEEEECCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH KLQSDIDTRTVATHVSRIRKKLRLDGSHGCEILSLYGYGYRCLIDRPAEAPAAAANDRAF HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCC APPAAETGVPPIELSQAASHPDAPAAGGPLATPAMSAAETDAMAGAAETWRDGVRPVDRY CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHH VANLLKERQDFEEQIRRLRDAFCEATLELRALKRQGPRRHHEIAALADYSEDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]