| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027097
Identifier: 238027097
GI number: 238027097
Start: 1628740
End: 1629810
Strand: Reverse
Name: 238027097
Synonym: bglu_1g14770
Alternate gene names: NA
Gene position: 1629810-1628740 (Counterclockwise)
Preceding gene: 238027098
Following gene: 238027096
Centisome position: 41.72
GC content: 70.12
Gene sequence:
>1071_bases ATGACCAAACGAGCATTGATCATCGGCGCGACCGGCATCGTCGGCCGCAATCTCGCTGACCATCTGGCCGGGCTCGGCGA CTGGGAAGTCACCGGCCTGTCGCGCGGGCGCACGGCGATGCCCGCGCGCGTCGAGGCGCTGACGGCGGACCTGCGCTCGC CCGATGCGGTGGCCGGCGCCCTGCGCGGGCGCGCGTTCAGCCACGTGTTTTTCACCGCCTGGGCACGCCAGCCGACCGAG GCCGAGAACATCCGCGTCAACGGCGCGATGGTGCGCAACGTGCTCGATGCGCTCGGCCCGGGCGGCCAGCTCGAGCACGC GGCGCTCGTCACCGGCCTGAAGCACTATCTCGGGCCGTTCGAAGCCTACGCCCAGGGCGCCGTGCCGCTCACGCCGTTTC GCGAGGAGCAGGGGCGCCAGCCGGTCGACAACTTCTATTACGAGCAGGAGGATCGCCTGTTCGAGGCCGCCCGGCGCCAC GGCTTCGGCTGGAGCGTGCATCGTCCGCACACGATCATCGGCTTCGCGCTCGGCAACGCCATGAACATGGGCGTGACGCT CGCCGTCTACGCGACGCTCTGCCGGGCGAGCGGGCAGCCGTTCGTGTTTCCCGGCTCGCCCGCGCAATGGAACGGCCTGA CCGACATGACCGACGCGCGCCTGCTGGCGCGCCATCTCGAATGGGCGGCGACCTCGCCGAGCGCGCGCGACGAGGCCTTC AACGTCGTCAACGGCGACGTGTTCCGCTGGAAGTGGATGTGGCAGCGCATCGCCGATTATTTCGGCATCGAGGCCGCGCC GTTCGACGGCCAGGCGCGTCCGCTGGAAGGCCGCATGCAGCAGGCCGGCGCGCAATGGCGGGAGATCGCCGCGCGCGCGG CGCTGGCCGAGCCCGACCTCGAGCGGCTGGTCTCGTGGTGGCATACCGACGCCGATCTCGGGCGCCCGATGGAAGTGCTG ACCGACATGAGCAAGAGCCGCAAGGCCGGCTTCCTCGATTACCAGAGCACCGTCGACGCGTTCTACGCGCTGTTCGATCG CCTCAAGGCCGAGCGGGTCATTCCGTCCTGA
Upstream 100 bases:
>100_bases AATCGGCGCGCTCCGTCGTGCGCCGCTCGGCCGGCCGCTCCGCTCCCGGCCCGCAGCCGGCGCACTGCATCAGGTTCCCC ATTTCAAGGCAGTCGATTCC
Downstream 100 bases:
>100_bases GCGGCACCCGCGCCGATCAGGCGCGGCGGCGCGCACGGCGCATGACACGGCGGCGCGCGCGGGCCGCCCCCGGTCGGCGC CGAAGGCCCGCTTGCCGGCC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase/Nucleoside-Diphosphate-Sugar Epimerase; Aldo-Keto Reductase Family Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTKRALIIGATGIVGRNLADHLAGLGDWEVTGLSRGRTAMPARVEALTADLRSPDAVAGALRGRAFSHVFFTAWARQPTE AENIRVNGAMVRNVLDALGPGGQLEHAALVTGLKHYLGPFEAYAQGAVPLTPFREEQGRQPVDNFYYEQEDRLFEAARRH GFGWSVHRPHTIIGFALGNAMNMGVTLAVYATLCRASGQPFVFPGSPAQWNGLTDMTDARLLARHLEWAATSPSARDEAF NVVNGDVFRWKWMWQRIADYFGIEAAPFDGQARPLEGRMQQAGAQWREIAARAALAEPDLERLVSWWHTDADLGRPMEVL TDMSKSRKAGFLDYQSTVDAFYALFDRLKAERVIPS
Sequences:
>Translated_356_residues MTKRALIIGATGIVGRNLADHLAGLGDWEVTGLSRGRTAMPARVEALTADLRSPDAVAGALRGRAFSHVFFTAWARQPTE AENIRVNGAMVRNVLDALGPGGQLEHAALVTGLKHYLGPFEAYAQGAVPLTPFREEQGRQPVDNFYYEQEDRLFEAARRH GFGWSVHRPHTIIGFALGNAMNMGVTLAVYATLCRASGQPFVFPGSPAQWNGLTDMTDARLLARHLEWAATSPSARDEAF NVVNGDVFRWKWMWQRIADYFGIEAAPFDGQARPLEGRMQQAGAQWREIAARAALAEPDLERLVSWWHTDADLGRPMEVL TDMSKSRKAGFLDYQSTVDAFYALFDRLKAERVIPS >Mature_355_residues TKRALIIGATGIVGRNLADHLAGLGDWEVTGLSRGRTAMPARVEALTADLRSPDAVAGALRGRAFSHVFFTAWARQPTEA ENIRVNGAMVRNVLDALGPGGQLEHAALVTGLKHYLGPFEAYAQGAVPLTPFREEQGRQPVDNFYYEQEDRLFEAARRHG FGWSVHRPHTIIGFALGNAMNMGVTLAVYATLCRASGQPFVFPGSPAQWNGLTDMTDARLLARHLEWAATSPSARDEAFN VVNGDVFRWKWMWQRIADYFGIEAAPFDGQARPLEGRMQQAGAQWREIAARAALAEPDLERLVSWWHTDADLGRPMEVLT DMSKSRKAGFLDYQSTVDAFYALFDRLKAERVIPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39412; Mature: 39281
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRALIIGATGIVGRNLADHLAGLGDWEVTGLSRGRTAMPARVEALTADLRSPDAVAGA CCCCEEEEECCCHHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH LRGRAFSHVFFTAWARQPTEAENIRVNGAMVRNVLDALGPGGQLEHAALVTGLKHYLGPF HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHH EAYAQGAVPLTPFREEQGRQPVDNFYYEQEDRLFEAARRHGFGWSVHRPHTIIGFALGNA HHHHCCCCCCCCCHHHHCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCH MNMGVTLAVYATLCRASGQPFVFPGSPAQWNGLTDMTDARLLARHLEWAATSPSARDEAF HCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH NVVNGDVFRWKWMWQRIADYFGIEAAPFDGQARPLEGRMQQAGAQWREIAARAALAEPDL HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH ERLVSWWHTDADLGRPMEVLTDMSKSRKAGFLDYQSTVDAFYALFDRLKAERVIPS HHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKRALIIGATGIVGRNLADHLAGLGDWEVTGLSRGRTAMPARVEALTADLRSPDAVAGA CCCEEEEECCCHHHCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH LRGRAFSHVFFTAWARQPTEAENIRVNGAMVRNVLDALGPGGQLEHAALVTGLKHYLGPF HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHH EAYAQGAVPLTPFREEQGRQPVDNFYYEQEDRLFEAARRHGFGWSVHRPHTIIGFALGNA HHHHCCCCCCCCCHHHHCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCH MNMGVTLAVYATLCRASGQPFVFPGSPAQWNGLTDMTDARLLARHLEWAATSPSARDEAF HCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH NVVNGDVFRWKWMWQRIADYFGIEAAPFDGQARPLEGRMQQAGAQWREIAARAALAEPDL HHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH ERLVSWWHTDADLGRPMEVLTDMSKSRKAGFLDYQSTVDAFYALFDRLKAERVIPS HHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA