| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027033
Identifier: 238027033
GI number: 238027033
Start: 1553233
End: 1553604
Strand: Reverse
Name: 238027033
Synonym: bglu_1g14110
Alternate gene names: NA
Gene position: 1553604-1553233 (Counterclockwise)
Preceding gene: 238027034
Following gene: 238027032
Centisome position: 39.77
GC content: 64.78
Gene sequence:
>372_bases ATGAATCCCGTTTCCCTCGTCTGCATCGTCACCGGCGTGCTGCTGAACGCCTGCGCGCAACTGCTGCTGAAGGCCGGCGT CAACGCCGTCGGCCATTTCGAGTTCACGCGCGCCAACATCATCCCGGTCGGCTTCAAGATCGCGACCCAGCTGCCGATCA TCGGCGGGCTCGGCTGCTACGTGCTGAGCGTGGTGGTCTGGATCGTCGGGCTGTCGCGCGTGGACGTCTCGATCGCCTAT CCGATGCTCTCGCTCGGCTATGTGGTGAACGCGTTCGCCGCCTGGTATCTGTTCGGCGAGGTGCTGTCGGTGCAGCGCCT GATCGGCATCGGCATCATCCTGGTGGGGGTGCTGGTGCTGGCGCGCAGTTGA
Upstream 100 bases:
>100_bases CCGCGCAAGGCCTGCCGATGACGGTGATCGCGCGCGACACGCGCCGCGTGATCGTCGAGAAACCCATGGCCAAGCCGCAA TCCTGAGGACCTTCGCGCCG
Downstream 100 bases:
>100_bases GCCTCGCCGCCGGGCGGCACGGCCGCTCCCGGCCGGCGCGCCGCGCCGTTGCGCCATGCCGGGTCGCACCGCGATTACCG GCGGCGCCCCCTTCCCCCAA
Product: Small multidrug resistance protein
Products: NA
Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNPVSLVCIVTGVLLNACAQLLLKAGVNAVGHFEFTRANIIPVGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQRLIGIGIILVGVLVLARS
Sequences:
>Translated_123_residues MNPVSLVCIVTGVLLNACAQLLLKAGVNAVGHFEFTRANIIPVGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQRLIGIGIILVGVLVLARS >Mature_123_residues MNPVSLVCIVTGVLLNACAQLLLKAGVNAVGHFEFTRANIIPVGFKIATQLPIIGGLGCYVLSVVVWIVGLSRVDVSIAY PMLSLGYVVNAFAAWYLFGEVLSVQRLIGIGIILVGVLVLARS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12999; Mature: 12999
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVSLVCIVTGVLLNACAQLLLKAGVNAVGHFEFTRANIIPVGFKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEECCCCEEECCHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLIGIGIILVGVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC >Mature Secondary Structure MNPVSLVCIVTGVLLNACAQLLLKAGVNAVGHFEFTRANIIPVGFKIATQLPIIGGLGCY CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCEEECCCCEEECCHHHHHHCCCCCCHHHH VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLIGIGIILVGVLVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA