Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is bcp [H]
Identifier: 238027027
GI number: 238027027
Start: 1547422
End: 1547883
Strand: Reverse
Name: bcp [H]
Synonym: bglu_1g14050
Alternate gene names: 238027027
Gene position: 1547883-1547422 (Counterclockwise)
Preceding gene: 238027028
Following gene: 238027026
Centisome position: 39.62
GC content: 62.77
Gene sequence:
>462_bases GTGTCAGTCGAAATCGACCGCCCAGTTCCCGATTTCACCGCGCCGGCGACAGGTGGCGAGTTCACCCTGTCCTCGCTGAA CGGCAAGAAGCTCGTGCTGTATTTCTATCCCAAGGACAACACGCCCGGCTGCACCACCGAAGGGTTGCAGTTCCGCGATC TGTACCCGAAGTTCAAGAAGGCCGGCGCCGAGATCGTCGGCGTGTCGCGCGACAGCCTGCGCTCGCACGACAGCTTCAAG GCCAAGCTCGAACTGCCGTTCCCGCTCGTTTCGGACCCCGACGAAACGCTCTGCGCGATGTTCGGCGTCATGAAACTGAA GAAAATGTATGGCAAGGAAGTGCGTGGGGTCGAGCGCTCGACCTTCCTGATCGACGGCGACGGCGTGCTGCGCCGGGAGT GGCGCGGCGTCAAGGTGCCGGGGCACGTGGACGAGGTGCTCGACGCTGTACAAGCGCTTTGA
Upstream 100 bases:
>100_bases CGGCGAGCTGATCGTCCAGCCCGGCTGAACGGTTCGCCGCGGTTTCCGTCATGCCCGGCCGGCCCAGCGCCGCGCCGCCG ATAACAACAGGAGAATTTCC
Downstream 100 bases:
>100_bases GGCGGGTTATATTGGGCCGCAATGAATGCCCGTCAGCCCCATCTTTTTCGCCGCTGCGCAGGCGCACCACATGAGGCGCT TAGGCCCGTGAGGCGCAGTA
Product: AhpC/Tsa family antioxidant
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSVEIDRPVPDFTAPATGGEFTLSSLNGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHDSFK AKLELPFPLVSDPDETLCAMFGVMKLKKMYGKEVRGVERSTFLIDGDGVLRREWRGVKVPGHVDEVLDAVQAL
Sequences:
>Translated_153_residues MSVEIDRPVPDFTAPATGGEFTLSSLNGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHDSFK AKLELPFPLVSDPDETLCAMFGVMKLKKMYGKEVRGVERSTFLIDGDGVLRREWRGVKVPGHVDEVLDAVQAL >Mature_152_residues SVEIDRPVPDFTAPATGGEFTLSSLNGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIVGVSRDSLRSHDSFKA KLELPFPLVSDPDETLCAMFGVMKLKKMYGKEVRGVERSTFLIDGDGVLRREWRGVKVPGHVDEVLDAVQAL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=165, Percent_Identity=35.1515151515151, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI32455266, Length=165, Percent_Identity=35.1515151515151, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI32455264, Length=165, Percent_Identity=35.1515151515151, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI32189392, Length=164, Percent_Identity=36.5853658536585, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1788825, Length=144, Percent_Identity=37.5, Blast_Score=103, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6322180, Length=134, Percent_Identity=32.8358208955224, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI17738015, Length=164, Percent_Identity=34.1463414634146, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24656348, Length=161, Percent_Identity=33.5403726708075, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864676, Length=161, Percent_Identity=33.5403726708075, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16984; Mature: 16853
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEIDRPVPDFTAPATGGEFTLSSLNGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHCCHHHHH AGAEIVGVSRDSLRSHDSFKAKLELPFPLVSDPDETLCAMFGVMKLKKMYGKEVRGVERS CCCEEEECCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TFLIDGDGVLRREWRGVKVPGHVDEVLDAVQAL EEEECCCCEEECCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SVEIDRPVPDFTAPATGGEFTLSSLNGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK CEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHCCHHHHH AGAEIVGVSRDSLRSHDSFKAKLELPFPLVSDPDETLCAMFGVMKLKKMYGKEVRGVERS CCCEEEECCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE TFLIDGDGVLRREWRGVKVPGHVDEVLDAVQAL EEEECCCCEEECCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]