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The map label for this gene is ydhO [H]

Identifier: 238027023

GI number: 238027023

Start: 1541646

End: 1542800

Strand: Reverse

Name: ydhO [H]

Synonym: bglu_1g14010

Alternate gene names: 238027023

Gene position: 1542800-1541646 (Counterclockwise)

Preceding gene: 238027024

Following gene: 238027014

Centisome position: 39.49

GC content: 72.99

Gene sequence:

>1155_bases
ATGCTGCGAATCTGGCTATCGATCGTCGTCGTTTCCCTGCTCGCCGCGTGCTCGACCGCGCCGCAGCAGCGGTCGGCGCG
CTCGTCCGCGGGCCCGCGCATCAGCACGCCGCGCGCCTTCGCACCGCCGCCCGACTTCCCGAACTTCGTCGATCACAGCA
TCGGCCGCGAGGAAATCCCGATCCAGGCGATGAGCCTCGTCGGCATTCCCTACCGCTGGGGCGGCAACACGCCCGACGCG
GGTTTCGATTGCAGCGGCCTCGTGCGCTATATCGTGTCGCGCGCCGCCAACGTGTCGCTGCCGCGCACCACCGCCGAGAT
GAGCACGCGCGGCGTGTCGGTCGAGCCCGACGAGATCGCGCCCGGCGACCTCGTGTTCTTCAACACCACCGGGCGGCCGC
ATTCTCACGTCGGGATCTACGTGGGCAAGCTGCGCTTCGTCAACGCGCCCTCGACAGGCGGCACGGTGCGGCTCGACTAT
CTGACCAATCCCTACTGGGCCAAGCACTTCGACGGCATCCGGCGCGTAGCGCCGCCGCGCCATGCGCCGACACCGTTCGA
TACGCCGACCTACGAAGCCGACAACCGCCAGCCCGAGGCGCCGCCCTCCTCCGCACCGCCATCGCTGTCGGCAACACCGC
GCGGGGCAGCCGCCGCACCGGCATATGCGACGGCGCGAGCCGAGCCGGCGCCGGCCGTGGCCATGGCAGCGCCGACAGCC
GCCGCCCACGGCATGTCGCCGCCGATTCAGGACGCCGCTGCAGGCGCCGATCCGTTCGAGCCACCGCCCGCCGCACTCTC
GGCCGCGCAGCGCCAGGCCCGTGCGGCAGGCGCGACGAGCGCCGTTGCAACCACCCCCGCCGCAACGGCGGCGCCGTCCG
CATCCGCGGGCCAGAGCCTCGCGACTGCCGCCGTTACCCGCGGCGTCATGTGTGCCGGGCCGCTTACGATTGCGGCCTCA
GACGCTGATCCAGATGCGATCGACGCCGCCGCCGACGCATTCGAGCCGCCGCCGCCCACCGCGCGCGCGGCAGCGCAACA
GGCGCGGCTCGCCTCGCCCGACGGCGTGCGGGTGATTCGCGCCTCGACGGCGCCGCCGTCCACCGCCGGCAGCGGCGACG
ATCCGATCGCCCGCTTCGCGAACGGCAGCGACTGA

Upstream 100 bases:

>100_bases
TATCTGAAGAATTCTTGCCGAAGCCAGGCCGGACCGACTACCATCCGCATTACCCGTCGTCATACGACGGGCGCCTCAAC
GGCGCCCGGCCCTCCTCCCG

Downstream 100 bases:

>100_bases
GTCGCTCCCCGCGCTGCGCCCGTCCCCGCCGCGAGGTTCTCGCGTGCCGCGCCGCGACAGCGCACCGCCCTCGACAACAG
CCCGTGCCCCGGCCACGACA

Product: lipoprotein, NLP/P60 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MLRIWLSIVVVSLLAACSTAPQQRSARSSAGPRISTPRAFAPPPDFPNFVDHSIGREEIPIQAMSLVGIPYRWGGNTPDA
GFDCSGLVRYIVSRAANVSLPRTTAEMSTRGVSVEPDEIAPGDLVFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKHFDGIRRVAPPRHAPTPFDTPTYEADNRQPEAPPSSAPPSLSATPRGAAAAPAYATARAEPAPAVAMAAPTA
AAHGMSPPIQDAAAGADPFEPPPAALSAAQRQARAAGATSAVATTPAATAAPSASAGQSLATAAVTRGVMCAGPLTIAAS
DADPDAIDAAADAFEPPPPTARAAAQQARLASPDGVRVIRASTAPPSTAGSGDDPIARFANGSD

Sequences:

>Translated_384_residues
MLRIWLSIVVVSLLAACSTAPQQRSARSSAGPRISTPRAFAPPPDFPNFVDHSIGREEIPIQAMSLVGIPYRWGGNTPDA
GFDCSGLVRYIVSRAANVSLPRTTAEMSTRGVSVEPDEIAPGDLVFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKHFDGIRRVAPPRHAPTPFDTPTYEADNRQPEAPPSSAPPSLSATPRGAAAAPAYATARAEPAPAVAMAAPTA
AAHGMSPPIQDAAAGADPFEPPPAALSAAQRQARAAGATSAVATTPAATAAPSASAGQSLATAAVTRGVMCAGPLTIAAS
DADPDAIDAAADAFEPPPPTARAAAQQARLASPDGVRVIRASTAPPSTAGSGDDPIARFANGSD
>Mature_384_residues
MLRIWLSIVVVSLLAACSTAPQQRSARSSAGPRISTPRAFAPPPDFPNFVDHSIGREEIPIQAMSLVGIPYRWGGNTPDA
GFDCSGLVRYIVSRAANVSLPRTTAEMSTRGVSVEPDEIAPGDLVFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDY
LTNPYWAKHFDGIRRVAPPRHAPTPFDTPTYEADNRQPEAPPSSAPPSLSATPRGAAAAPAYATARAEPAPAVAMAAPTA
AAHGMSPPIQDAAAGADPFEPPPAALSAAQRQARAAGATSAVATTPAATAAPSASAGQSLATAAVTRGVMCAGPLTIAAS
DADPDAIDAAADAFEPPPPTARAAAQQARLASPDGVRVIRASTAPPSTAGSGDDPIARFANGSD

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=44.2622950819672, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1786421, Length=130, Percent_Identity=40.7692307692308, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1788501, Length=174, Percent_Identity=35.632183908046, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788001, Length=116, Percent_Identity=41.3793103448276, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 39183; Mature: 39183

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIWLSIVVVSLLAACSTAPQQRSARSSAGPRISTPRAFAPPPDFPNFVDHSIGREEIP
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
IQAMSLVGIPYRWGGNTPDAGFDCSGLVRYIVSRAANVSLPRTTAEMSTRGVSVEPDEIA
HHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
PGDLVFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKHFDGIRRVAPPR
CCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC
HAPTPFDTPTYEADNRQPEAPPSSAPPSLSATPRGAAAAPAYATARAEPAPAVAMAAPTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCHH
AAHGMSPPIQDAAAGADPFEPPPAALSAAQRQARAAGATSAVATTPAATAAPSASAGQSL
HHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCCCHHH
ATAAVTRGVMCAGPLTIAASDADPDAIDAAADAFEPPPPTARAAAQQARLASPDGVRVIR
HHHHHHCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEE
ASTAPPSTAGSGDDPIARFANGSD
ECCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MLRIWLSIVVVSLLAACSTAPQQRSARSSAGPRISTPRAFAPPPDFPNFVDHSIGREEIP
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
IQAMSLVGIPYRWGGNTPDAGFDCSGLVRYIVSRAANVSLPRTTAEMSTRGVSVEPDEIA
HHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC
PGDLVFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKHFDGIRRVAPPR
CCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC
HAPTPFDTPTYEADNRQPEAPPSSAPPSLSATPRGAAAAPAYATARAEPAPAVAMAAPTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCHH
AAHGMSPPIQDAAAGADPFEPPPAALSAAQRQARAAGATSAVATTPAATAAPSASAGQSL
HHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCCCCCCHHH
ATAAVTRGVMCAGPLTIAASDADPDAIDAAADAFEPPPPTARAAAQQARLASPDGVRVIR
HHHHHHCCEEECCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEE
ASTAPPSTAGSGDDPIARFANGSD
ECCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]