Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027024
Identifier: 238027024
GI number: 238027024
Start: 1543086
End: 1543616
Strand: Reverse
Name: 238027024
Synonym: bglu_1g14020
Alternate gene names: NA
Gene position: 1543616-1543086 (Counterclockwise)
Preceding gene: 238027025
Following gene: 238027023
Centisome position: 39.51
GC content: 57.82
Gene sequence:
>531_bases ATGGACCGATGGAAACAGTACTTGTTTGAGTCTCACCCGGAAGCCACGCTTCGGGATTGGGCGAAGCGCCTGACGCTATT CCGTTTTTTCAGGGCCTATGGCGGACATGCCAATGATGGCGATTCTCTCGACCTTGCCTACCGCTATGAAACGGCCCAGG ACCTGGAAAAATTCCTGCTGTCACTGGGCATCGTTCCGGTCAAGTATTCGGAGAAGCCGCCCCAACCGGAGTTCGGCATC GCTTATAAGGCCGACGAGTTCGTGAAATTTCCGTCGCTGGTCCCAGGAACCGAATGGATCCGACAGCCGGGACGCTGCCT CATCGCAGGTAAGCCGGTGTTCGTCTGGTGCGGGCGTAACGTGGCGACGATCTCCATCGCCGGCGCGCCCTACACAGTGA CAGAGGCGGACGTGCAAGCGGCGCAAGCCGTAGAGGCGGTGCTCGCATCGGCTTGGCTGGAGAGAGTCGATCCGCCCGTG GATACAAAGCACTACATCTGTCCGAAATATTATCCGGAATACTTCGAATGA
Upstream 100 bases:
>100_bases GCCAACGTCCAAATCGTCGACAATCCGGCCTCGTTGGCAGGCCCAGCAAATTGGACATGAACGCCCCCGATAGTCGGTGG TTCAGGTTGGCGGAAGCAAT
Downstream 100 bases:
>100_bases GGATTCGCGCAGCGCGACGGCATCACGCCCCGTCGATACGCCGGCCAAGGCTCGCTCACACGGCAGTCGCCTGGGGTGTC GCCGTTCGCAATCCCCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV DTKHYICPKYYPEYFE
Sequences:
>Translated_176_residues MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV DTKHYICPKYYPEYFE >Mature_176_residues MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV DTKHYICPKYYPEYFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20102; Mature: 20102
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH SLGIVPVKYSEKPPQPEFGIAYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRN HHCCCCEECCCCCCCCCCCEEECCHHHHHCCCCCCCHHHHHCCCCEEEECCCEEEEECCC VATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPVDTKHYICPKYYPEYFE EEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH SLGIVPVKYSEKPPQPEFGIAYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRN HHCCCCEECCCCCCCCCCCEEECCHHHHHCCCCCCCHHHHHCCCCEEEECCCEEEEECCC VATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPVDTKHYICPKYYPEYFE EEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA