Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027024

Identifier: 238027024

GI number: 238027024

Start: 1543086

End: 1543616

Strand: Reverse

Name: 238027024

Synonym: bglu_1g14020

Alternate gene names: NA

Gene position: 1543616-1543086 (Counterclockwise)

Preceding gene: 238027025

Following gene: 238027023

Centisome position: 39.51

GC content: 57.82

Gene sequence:

>531_bases
ATGGACCGATGGAAACAGTACTTGTTTGAGTCTCACCCGGAAGCCACGCTTCGGGATTGGGCGAAGCGCCTGACGCTATT
CCGTTTTTTCAGGGCCTATGGCGGACATGCCAATGATGGCGATTCTCTCGACCTTGCCTACCGCTATGAAACGGCCCAGG
ACCTGGAAAAATTCCTGCTGTCACTGGGCATCGTTCCGGTCAAGTATTCGGAGAAGCCGCCCCAACCGGAGTTCGGCATC
GCTTATAAGGCCGACGAGTTCGTGAAATTTCCGTCGCTGGTCCCAGGAACCGAATGGATCCGACAGCCGGGACGCTGCCT
CATCGCAGGTAAGCCGGTGTTCGTCTGGTGCGGGCGTAACGTGGCGACGATCTCCATCGCCGGCGCGCCCTACACAGTGA
CAGAGGCGGACGTGCAAGCGGCGCAAGCCGTAGAGGCGGTGCTCGCATCGGCTTGGCTGGAGAGAGTCGATCCGCCCGTG
GATACAAAGCACTACATCTGTCCGAAATATTATCCGGAATACTTCGAATGA

Upstream 100 bases:

>100_bases
GCCAACGTCCAAATCGTCGACAATCCGGCCTCGTTGGCAGGCCCAGCAAATTGGACATGAACGCCCCCGATAGTCGGTGG
TTCAGGTTGGCGGAAGCAAT

Downstream 100 bases:

>100_bases
GGATTCGCGCAGCGCGACGGCATCACGCCCCGTCGATACGCCGGCCAAGGCTCGCTCACACGGCAGTCGCCTGGGGTGTC
GCCGTTCGCAATCCCCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI
AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV
DTKHYICPKYYPEYFE

Sequences:

>Translated_176_residues
MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI
AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV
DTKHYICPKYYPEYFE
>Mature_176_residues
MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLLSLGIVPVKYSEKPPQPEFGI
AYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRNVATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPV
DTKHYICPKYYPEYFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20102; Mature: 20102

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH
SLGIVPVKYSEKPPQPEFGIAYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRN
HHCCCCEECCCCCCCCCCCEEECCHHHHHCCCCCCCHHHHHCCCCEEEECCCEEEEECCC
VATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPVDTKHYICPKYYPEYFE
EEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRWKQYLFESHPEATLRDWAKRLTLFRFFRAYGGHANDGDSLDLAYRYETAQDLEKFLL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH
SLGIVPVKYSEKPPQPEFGIAYKADEFVKFPSLVPGTEWIRQPGRCLIAGKPVFVWCGRN
HHCCCCEECCCCCCCCCCCEEECCHHHHHCCCCCCCHHHHHCCCCEEEECCCEEEEECCC
VATISIAGAPYTVTEADVQAAQAVEAVLASAWLERVDPPVDTKHYICPKYYPEYFE
EEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA