| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027007
Identifier: 238027007
GI number: 238027007
Start: 1526255
End: 1527430
Strand: Direct
Name: 238027007
Synonym: bglu_1g13850
Alternate gene names: NA
Gene position: 1526255-1527430 (Clockwise)
Preceding gene: 238027006
Following gene: 238027008
Centisome position: 39.07
GC content: 74.15
Gene sequence:
>1176_bases CTGCCGCCGCTGAGCGCGCTGGCGATCGCCAATTACCGCTCGCTGCGCGAATTCATCGTGCCGCTGGCCGGGCTCAACGT CGTGACGGGGCCGAACGGCAGCGGCAAATCGAGCGTCTACCGCGCGCTGCGGCTGCTGGCCGACACCGCGCAGGGCCGCG CGATCCCGTCGCTGGCGCGCGAGGGCGGCCTGGCCTCGACGCTGTGGGCCGGCCCCGAGCGCTTCTCGCGCGCGATGCTG GCGGGCGAGACGCCCGTCGAGCCGCTGGTGCGCAAGGCGCCGGTGTCGTTGCGGCTCGGCTTTGCCTGCAGCGATTTCGG TTATGCGATCGATCTCGGCATGCCGGTCATCAACGCGCGCACGCTGTTCGGCCGTGATCCGGTGATCAAGCGCGAGTGCG TCTGGAGCGGCACGCTGCTGCGCCCGTCGGCGCTGCTCGTCGATCGGCACGGCGCGCAGATCCGCACGCGCGACGCGGCG GGCGGCTGGCGCACCGTGCCGCAGCCGGTGGCCTCGTACGACAGCATGCTGACCGAATTCGTCGACCCGGCCGGCGCGCC CGAGATGATCGCGTTGCGCGAGCGGATCCGCTCGTGGCGCTTCTACGACCATTTCCGCACCGATGCCGACGCGCCCGCGC GGCGCGCGCAGATCGGCACCCACACGCCGGTGCTGGCCGACGACGGGGCCGATCTGGCCGCCGCGCTGCAGACCATCCGC GAGATCGGCGACGCCGAGGCGCTCGACGCGACCATCGACGACGCGTTCCCCGGCGCGCGGCTCGAGGTGGACGATGCGGC CGGGCGCGGCCGCTTCGAGCTGAGGATGCAGCAGCCCGGGCTGCTGCGCCCGCTCGGCGCGGCCGAGCTGTCGGACGGCA CGCTGCGCTATCTGCTGCTCGCGGCCGCGCTGCTCACGCCGCGTCCGCCGGCCCTGCTGGTGCTGAACGAACCCGAGACG AGCCTGCACCCGGACCTGCTGCCGGCGCTCGGCCGGCTGATCGCGCTGGCCGCGGCGCGCTCGCAGGTGATCGTGGTCTC GCACGCGGCGCGGCTCGTCGCCACCCTCGAGCGCGAGGCGGGCAGCCTGTCGCTGGTGCTGGACAAGCGGCTCGGCGAAA CCCGTCTCGACGACGAGGCGCTCGAGCGCCCCGCCTGGAAGTGGCCGGCGCGCTGA
Upstream 100 bases:
>100_bases GATCCAACCGCCACCGATCCGGTGCCGGCGCGCTGACGGCGGCGCCAGCCCGGCTGCCCGATACGCGTGCCCGATGCCGA TGCCCGACTCCTCCTCGCCG
Downstream 100 bases:
>100_bases GCCGGCCGCAGCGGCGCCGCCCATTGGCGAGGCCCGCGGCGCCATGCCGGCTGCGCCCCTTTTTCCACGCGGAAAAAATG ACCGACAGGAATGTATCCGT
Product: ATPase-like protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; DNA Replication And Repair Protein RecF; SMC Domain Protein; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPPLSALAIANYRSLREFIVPLAGLNVVTGPNGSGKSSVYRALRLLADTAQGRAIPSLAREGGLASTLWAGPERFSRAML AGETPVEPLVRKAPVSLRLGFACSDFGYAIDLGMPVINARTLFGRDPVIKRECVWSGTLLRPSALLVDRHGAQIRTRDAA GGWRTVPQPVASYDSMLTEFVDPAGAPEMIALRERIRSWRFYDHFRTDADAPARRAQIGTHTPVLADDGADLAAALQTIR EIGDAEALDATIDDAFPGARLEVDDAAGRGRFELRMQQPGLLRPLGAAELSDGTLRYLLLAAALLTPRPPALLVLNEPET SLHPDLLPALGRLIALAAARSQVIVVSHAARLVATLEREAGSLSLVLDKRLGETRLDDEALERPAWKWPAR
Sequences:
>Translated_391_residues MPPLSALAIANYRSLREFIVPLAGLNVVTGPNGSGKSSVYRALRLLADTAQGRAIPSLAREGGLASTLWAGPERFSRAML AGETPVEPLVRKAPVSLRLGFACSDFGYAIDLGMPVINARTLFGRDPVIKRECVWSGTLLRPSALLVDRHGAQIRTRDAA GGWRTVPQPVASYDSMLTEFVDPAGAPEMIALRERIRSWRFYDHFRTDADAPARRAQIGTHTPVLADDGADLAAALQTIR EIGDAEALDATIDDAFPGARLEVDDAAGRGRFELRMQQPGLLRPLGAAELSDGTLRYLLLAAALLTPRPPALLVLNEPET SLHPDLLPALGRLIALAAARSQVIVVSHAARLVATLEREAGSLSLVLDKRLGETRLDDEALERPAWKWPAR >Mature_390_residues PPLSALAIANYRSLREFIVPLAGLNVVTGPNGSGKSSVYRALRLLADTAQGRAIPSLAREGGLASTLWAGPERFSRAMLA GETPVEPLVRKAPVSLRLGFACSDFGYAIDLGMPVINARTLFGRDPVIKRECVWSGTLLRPSALLVDRHGAQIRTRDAAG GWRTVPQPVASYDSMLTEFVDPAGAPEMIALRERIRSWRFYDHFRTDADAPARRAQIGTHTPVLADDGADLAAALQTIRE IGDAEALDATIDDAFPGARLEVDDAAGRGRFELRMQQPGLLRPLGAAELSDGTLRYLLLAAALLTPRPPALLVLNEPETS LHPDLLPALGRLIALAAARSQVIVVSHAARLVATLEREAGSLSLVLDKRLGETRLDDEALERPAWKWPAR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42181; Mature: 42050
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLSALAIANYRSLREFIVPLAGLNVVTGPNGSGKSSVYRALRLLADTAQGRAIPSLAR CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH EGGLASTLWAGPERFSRAMLAGETPVEPLVRKAPVSLRLGFACSDFGYAIDLGMPVINAR CCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCEECCC TLFGRDPVIKRECVWSGTLLRPSALLVDRHGAQIRTRDAAGGWRTVPQPVASYDSMLTEF CCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH VDPAGAPEMIALRERIRSWRFYDHFRTDADAPARRAQIGTHTPVLADDGADLAAALQTIR HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHH EIGDAEALDATIDDAFPGARLEVDDAAGRGRFELRMQQPGLLRPLGAAELSDGTLRYLLL HHCCHHHHCCHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH AAALLTPRPPALLVLNEPETSLHPDLLPALGRLIALAAARSQVIVVSHAARLVATLEREA HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC GSLSLVLDKRLGETRLDDEALERPAWKWPAR CCEEEEEECCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure PPLSALAIANYRSLREFIVPLAGLNVVTGPNGSGKSSVYRALRLLADTAQGRAIPSLAR CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH EGGLASTLWAGPERFSRAMLAGETPVEPLVRKAPVSLRLGFACSDFGYAIDLGMPVINAR CCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCCEEEECCCCEECCC TLFGRDPVIKRECVWSGTLLRPSALLVDRHGAQIRTRDAAGGWRTVPQPVASYDSMLTEF CCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH VDPAGAPEMIALRERIRSWRFYDHFRTDADAPARRAQIGTHTPVLADDGADLAAALQTIR HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHH EIGDAEALDATIDDAFPGARLEVDDAAGRGRFELRMQQPGLLRPLGAAELSDGTLRYLLL HHCCHHHHCCHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH AAALLTPRPPALLVLNEPETSLHPDLLPALGRLIALAAARSQVIVVSHAARLVATLEREA HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCC GSLSLVLDKRLGETRLDDEALERPAWKWPAR CCEEEEEECCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA