Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is ypjH [H]

Identifier: 238027008

GI number: 238027008

Start: 1527651

End: 1528718

Strand: Direct

Name: ypjH [H]

Synonym: bglu_1g13860

Alternate gene names: 238027008

Gene position: 1527651-1528718 (Clockwise)

Preceding gene: 238027007

Following gene: 238027011

Centisome position: 39.11

GC content: 67.7

Gene sequence:

>1068_bases
ATGAAGATTGCTCAGATCGCGCCACTGACCGAATCCGTGCCGCCGAAGCTCTACGGCGGCACCGAACGGGTCGTGTCCTA
TATCACGGAGGCGCTGGTCGAACTTGGGCACGACGTGACCTTGTTCGCGAGCGGGGACTCGCGCACCAGCGCGAAGCTGG
ACGCCGTATGGCCGCGCGCGATGCGGCTCGACGTGTCGATTCGCGACCGGGTGGCGCCGCACATGCTGCTGATGGAGCGC
GTCGCGCGCCGCGCGAACGAGTTCGACGTGCTGCACTTCCACATGGACTATTACTCGTTCTCGGTGTTCCAGCGCCAGCC
GGTGCCTTTCCTGACCACGCTGCACGGCCGCCTCGACCTGCTCGAGCAGCAGCCGGTGTTCGACCTGTTCGACACCGCGC
CCGTCGTCTCGATCTCGAACGCGCAGCGCCAGCCGCTGCCTCGCGCGAACTGGCTGAAGACGGTGCAGCACGGCCTGCCC
GACACGCTCTACACGCCGCAGCCGGTGGAACCGCAGTATCTCGCGTTCCTGGGCCGCATCTCGCCCGAGAAGCGCGTGGA
CCGCGCGATCCGGATCGCCGAACGCTGCGGCCTGCCGATCCGGATCGCGGCGAAGATCGACGCGGCCGACGAGGAGTATT
TCGAACGCAAGATCAAGCCCTTGTTCGCGCTGCCGCACGTCGAGTACATCGGCGAGATCGCCGACGACCAGAAGGCCGCG
TTCCTGTCCGGCGCGCACGCGCTGCTGTTTCCGATCGACTGGCCCGAGCCGTTCGGCCTGGTCATGATCGAGGCGATGGC
CTGCGGCACCCCGGTGATCGGCTTCAACCGCGGCGCCGTGCCGGAGGTGATCGAGGAGGGGCTGACCGGCTTCATCGTCG
AGGACGAGATCGGCGCGGTGGCCGCCGTGAACCGCCTGCCGCTGCTGTCGCGCACCCGCGTGCGGCAGCGTTTCGAGGAG
CGCTTCACGTCGCGCCGCATGGCGCAGCAGTACGTGGACGTCTACCAGGCCCTGATCCGCGCACAGAAGCGCTCGCGCTT
CAAGGTGATCGATTCGGCCGCCTCCTGA

Upstream 100 bases:

>100_bases
GTGCAATCCCGCTGCCGCCCGTCCTGACGATCGCGAATAATACCGGGAGTCGGCGCCTTGCTGCTGCGGCGCCGTCGACG
GGCATCCCGGAGACAAAACG

Downstream 100 bases:

>100_bases
CCCGCTGTCCTTTCGGGGCCGGCCTCCCGAGCGTGGCGCGGCGCCGTGGCGGATGCAAAAATGGCGCCCGTCGCGGGCGC
CATTCGTTGCGGGTCGAGCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKIAQIAPLTESVPPKLYGGTERVVSYITEALVELGHDVTLFASGDSRTSAKLDAVWPRAMRLDVSIRDRVAPHMLLMER
VARRANEFDVLHFHMDYYSFSVFQRQPVPFLTTLHGRLDLLEQQPVFDLFDTAPVVSISNAQRQPLPRANWLKTVQHGLP
DTLYTPQPVEPQYLAFLGRISPEKRVDRAIRIAERCGLPIRIAAKIDAADEEYFERKIKPLFALPHVEYIGEIADDQKAA
FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIGFNRGAVPEVIEEGLTGFIVEDEIGAVAAVNRLPLLSRTRVRQRFEE
RFTSRRMAQQYVDVYQALIRAQKRSRFKVIDSAAS

Sequences:

>Translated_355_residues
MKIAQIAPLTESVPPKLYGGTERVVSYITEALVELGHDVTLFASGDSRTSAKLDAVWPRAMRLDVSIRDRVAPHMLLMER
VARRANEFDVLHFHMDYYSFSVFQRQPVPFLTTLHGRLDLLEQQPVFDLFDTAPVVSISNAQRQPLPRANWLKTVQHGLP
DTLYTPQPVEPQYLAFLGRISPEKRVDRAIRIAERCGLPIRIAAKIDAADEEYFERKIKPLFALPHVEYIGEIADDQKAA
FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIGFNRGAVPEVIEEGLTGFIVEDEIGAVAAVNRLPLLSRTRVRQRFEE
RFTSRRMAQQYVDVYQALIRAQKRSRFKVIDSAAS
>Mature_355_residues
MKIAQIAPLTESVPPKLYGGTERVVSYITEALVELGHDVTLFASGDSRTSAKLDAVWPRAMRLDVSIRDRVAPHMLLMER
VARRANEFDVLHFHMDYYSFSVFQRQPVPFLTTLHGRLDLLEQQPVFDLFDTAPVVSISNAQRQPLPRANWLKTVQHGLP
DTLYTPQPVEPQYLAFLGRISPEKRVDRAIRIAERCGLPIRIAAKIDAADEEYFERKIKPLFALPHVEYIGEIADDQKAA
FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIGFNRGAVPEVIEEGLTGFIVEDEIGAVAAVNRLPLLSRTRVRQRFEE
RFTSRRMAQQYVDVYQALIRAQKRSRFKVIDSAAS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40123; Mature: 40123

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAQIAPLTESVPPKLYGGTERVVSYITEALVELGHDVTLFASGDSRTSAKLDAVWPRA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHH
MRLDVSIRDRVAPHMLLMERVARRANEFDVLHFHMDYYSFSVFQRQPVPFLTTLHGRLDL
HEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHH
LEQQPVFDLFDTAPVVSISNAQRQPLPRANWLKTVQHGLPDTLYTPQPVEPQYLAFLGRI
HHCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
SPEKRVDRAIRIAERCGLPIRIAAKIDAADEEYFERKIKPLFALPHVEYIGEIADDQKAA
CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH
FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIGFNRGAVPEVIEEGLTGFIVEDEIGAV
HHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCEEEEECCCCHH
AAVNRLPLLSRTRVRQRFEERFTSRRMAQQYVDVYQALIRAQKRSRFKVIDSAAS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIAQIAPLTESVPPKLYGGTERVVSYITEALVELGHDVTLFASGDSRTSAKLDAVWPRA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHH
MRLDVSIRDRVAPHMLLMERVARRANEFDVLHFHMDYYSFSVFQRQPVPFLTTLHGRLDL
HEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHH
LEQQPVFDLFDTAPVVSISNAQRQPLPRANWLKTVQHGLPDTLYTPQPVEPQYLAFLGRI
HHCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
SPEKRVDRAIRIAERCGLPIRIAAKIDAADEEYFERKIKPLFALPHVEYIGEIADDQKAA
CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH
FLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIGFNRGAVPEVIEEGLTGFIVEDEIGAV
HHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCHHHHHHCCCCEEEEECCCCHH
AAVNRLPLLSRTRVRQRFEERFTSRRMAQQYVDVYQALIRAQKRSRFKVIDSAAS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]