Click here to switch to the map view.

The map label for this gene is clpX [H]

Identifier: 238026974

GI number: 238026974

Start: 1482533

End: 1483804

Strand: Direct

Name: clpX [H]

Synonym: bglu_1g13510

Alternate gene names: 238026974

Gene position: 1482533-1483804 (Clockwise)

Preceding gene: 238026973

Following gene: 238026975

Centisome position: 37.95

GC content: 61.24

Gene sequence:

>1272_bases
ATGGCGGACAAGAAAGGTTCGAACAGCGAAAAGCTGTTGTATTGCTCGTTTTGCGGGAAAAGCCAGCATGAGGTGAAGAA
ACTCATCGCCGGCCCGTCGGTGTTCATCTGCGATGAATGCATCGACCTGTGCAACGAGATCATTCGCGACGAAGCAGCCG
CATCCGGGGTCGAAGCCAGTCTGTCGAAATCGGATTTGCCGAGCCCGCAGGAGATCCGCGAGATCCTCGATCAGTACGTG
ATCGGCCAGGAGCGCGCGAAGAAGATTCTCGCGGTGGCCGTCTACAATCACTACAAGCGTCTCAAGCATCTCGACAAGAA
GGACGAGGTCGAGCTCTCGAAGAGCAACATCCTGCTGATCGGCCCGACCGGCTCCGGCAAGACGCTGCTCGCGCAGACGC
TGGCGCGCCTGTTGAACGTGCCGTTCGTGATCGCCGACGCGACCACGCTGACGGAAGCCGGCTATGTCGGCGAGGACGTC
GAGAACATCATTCAGAAGCTGTTGCAGAACTGCAACTACGAAGTCGAGAAGGCGCAGCGCGGCATCGTCTACATCGATGA
GATCGACAAGATCAGCCGCAAGTCGGATAACCCGTCGATCACGCGCGACGTGTCGGGCGAGGGCGTGCAGCAGGCGCTGC
TCAAGCTCGTCGAGGGCACGATGGCGTCGGTGCCGCCGCAGGGCGGTCGCAAGCATCCCAACCAGGATTTCATCCAGGTC
GATACCACCAACATCCTGTTCATCTGCGGTGGCGCGTTCGACGGGCTCGAGAAGGTCATCACGGATCGGACCGAGAAGAC
CGGCATCGGCTTTGGCGCGACGGTGAAGAGCAAGCAGGAGCGCGATTCGGGCGAGGTGTTGCGCGAGGTCGAGCCCGAAG
ACCTGATCAAATTCGGGTTGATTCCCGAACTGATCGGCCGGCTGCCGGTGGTCGCCACGCTCGGCAAGCTCGACGAAGCC
GCGCTGATGAAGATCCTGGTCGAGCCGAAGAACGCGCTCGTCAAGCAGTACCAGAAGCTGTTCGCGATGGAGCGCGTCGA
GCTCGAACTGCGGCCGGACGCGCTGCAGGCCGTGGCCCGCAAGGCGATCCGCCGCAAGACCGGGGCGCGCGGGCTGCGTT
CGATCATCGAACAGGCGTTGCTCGACGTGATGTACGAATTGCCCACGCTCAAGGGCGTGAGCAAGGTCATCATCGACGAC
AACGTGATCGACGGCGACGGCAAGCCCCTACTGATCTACGAAGACGCCCCGAAAGTGGCGGGTTCGAATTGA

Upstream 100 bases:

>100_bases
CGGCTAGACCAGCACGGCCGGCGAATACCCATGTCGATGTCATGGGCGGCCGGCCAGACGGCGTATCATGTAACTCGTGT
GTCCGGAGGCTCATACATCC

Downstream 100 bases:

>100_bases
GCGGCTTGACTGTTTGAAGGAGCAAAAAAGCCGTTCATGGCGTCATGAGCGGCTTTTTTCGTTTAGTCTTGTGGGTAACA
CTGACTTACCGTTTCACGGC

Product: ATP-dependent protease ATP-binding subunit ClpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAASGVEASLSKSDLPSPQEIREILDQYV
IGQERAKKILAVAVYNHYKRLKHLDKKDEVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV
ENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQV
DTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDSGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEA
ALMKILVEPKNALVKQYQKLFAMERVELELRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDD
NVIDGDGKPLLIYEDAPKVAGSN

Sequences:

>Translated_423_residues
MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAASGVEASLSKSDLPSPQEIREILDQYV
IGQERAKKILAVAVYNHYKRLKHLDKKDEVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDV
ENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQV
DTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDSGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEA
ALMKILVEPKNALVKQYQKLFAMERVELELRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDD
NVIDGDGKPLLIYEDAPKVAGSN
>Mature_422_residues
ADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAASGVEASLSKSDLPSPQEIREILDQYVI
GQERAKKILAVAVYNHYKRLKHLDKKDEVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVE
NIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVD
TTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDSGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAA
LMKILVEPKNALVKQYQKLFAMERVELELRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDDN
VIDGDGKPLLIYEDAPKVAGSN

Specific function: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP [H]

COG id: COG1219

COG function: function code O; ATP-dependent protease Clp, ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpX chaperone family [H]

Homologues:

Organism=Homo sapiens, GI7242140, Length=331, Percent_Identity=52.2658610271903, Blast_Score=321, Evalue=9e-88,
Organism=Escherichia coli, GI1786642, Length=415, Percent_Identity=74.2168674698795, Blast_Score=624, Evalue=1e-180,
Organism=Escherichia coli, GI1790366, Length=100, Percent_Identity=46, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71988663, Length=389, Percent_Identity=42.9305912596401, Blast_Score=281, Evalue=4e-76,
Organism=Caenorhabditis elegans, GI71982908, Length=297, Percent_Identity=47.4747474747475, Blast_Score=273, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI71982905, Length=297, Percent_Identity=47.4747474747475, Blast_Score=272, Evalue=2e-73,
Organism=Caenorhabditis elegans, GI71988660, Length=249, Percent_Identity=44.1767068273092, Blast_Score=189, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6319704, Length=447, Percent_Identity=38.9261744966443, Blast_Score=275, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24648291, Length=326, Percent_Identity=46.319018404908, Blast_Score=287, Evalue=9e-78,
Organism=Drosophila melanogaster, GI24648289, Length=326, Percent_Identity=46.319018404908, Blast_Score=287, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR019489
- InterPro:   IPR004487
- InterPro:   IPR010603 [H]

Pfam domain/function: PF07724 AAA_2; PF10431 ClpB_D2-small; PF06689 zf-C4_ClpX [H]

EC number: NA

Molecular weight: Translated: 46436; Mature: 46305

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAASGVEAS
CCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHH
LSKSDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDEVELSKSNILLI
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
GPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQR
ECCCCCHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCC
GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQV
CEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
DTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDSGEVLREVEPEDLIKFGL
ECCEEEEEECCCHHHHHHHHHCCCHHCCCCCCCCCCCHHCCCHHHHHHHCCHHHHHHHCC
IPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFAMERVELELRPDALQAVAR
HHHHHCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHH
KAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDDNVIDGDGKPLLIYEDAPKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEECCCCCEEEEECCCCCCC
GSN
CCC
>Mature Secondary Structure 
ADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAASGVEAS
CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHH
LSKSDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDEVELSKSNILLI
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEE
GPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQR
ECCCCCHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCC
GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQV
CEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
DTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDSGEVLREVEPEDLIKFGL
ECCEEEEEECCCHHHHHHHHHCCCHHCCCCCCCCCCCHHCCCHHHHHHHCCHHHHHHHCC
IPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFAMERVELELRPDALQAVAR
HHHHHCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHH
KAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDDNVIDGDGKPLLIYEDAPKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCEECCCCCEEEEECCCCCCC
GSN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA