| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is allA [H]
Identifier: 238026943
GI number: 238026943
Start: 1438488
End: 1439000
Strand: Direct
Name: allA [H]
Synonym: bglu_1g13150
Alternate gene names: 238026943
Gene position: 1438488-1439000 (Clockwise)
Preceding gene: 238026942
Following gene: 238026946
Centisome position: 36.82
GC content: 69.98
Gene sequence:
>513_bases ATGAAGACGCTCGCCATCGAGGCGCTGACGCGCGCCGCGTTCGCGCCGTTCGGCGACGTGATCGAGACCGCCGGGGCGAC GCGGATTCCGATCAATCTCGGCACCACCACCCGCTTCCACGATCTCGCCAGGATCGACGTGGCCGACGGCGGCGGCCGGC CGCTCGTCAACCTGTTTCGCGGCGAGCCGCGCGCGCTGCCGTTCGAGGTGACGATGCTCGAGCGCCACCCGCTCGGCAGC CAGGCGTTCCTGCCGCTCGACGCACGGCCCTATCTGGTGGTGGTGGCGCCGGCCGGCGAGCTCGATCCCGCGAGGATCCG CGCATTCGTCACGCACGGCTGGCAGGGCGTGAACTATGCGAAGGGCGTTTGGCACCATCCGCTGATCGCGCTCGGCCAGA CCAGCGATTTCATCGTCGTCGATCGCGGCGGCGAGGGCGTGAACCTGGACGAGACGGCGCTCGACGAATCGCTCTGGCTC ACCGACGCCGCCCTGCATCACGTGACGGCCTGA
Upstream 100 bases:
>100_bases AGGCGGAGCTGGCCGCGCTTGGCCCCGTCACGCACGTGCGGCTCAACATCATCCCGGACGGCGGCGTGTCGCGTCTGCGC CTCTGGGGCACGCTCGCCCA
Downstream 100 bases:
>100_bases TCGCCCCCCGCGGCAACCCTGTCCCCGGCCCCGCGAACCGCGGTTCGCGGGGCTCCGTTCGCGCCCGCCGCCGGTTCAGA GCGCCTCGCTCACGCACGGC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKTLAIEALTRAAFAPFGDVIETAGATRIPINLGTTTRFHDLARIDVADGGGRPLVNLFRGEPRALPFEVTMLERHPLGS QAFLPLDARPYLVVVAPAGELDPARIRAFVTHGWQGVNYAKGVWHHPLIALGQTSDFIVVDRGGEGVNLDETALDESLWL TDAALHHVTA
Sequences:
>Translated_170_residues MKTLAIEALTRAAFAPFGDVIETAGATRIPINLGTTTRFHDLARIDVADGGGRPLVNLFRGEPRALPFEVTMLERHPLGS QAFLPLDARPYLVVVAPAGELDPARIRAFVTHGWQGVNYAKGVWHHPLIALGQTSDFIVVDRGGEGVNLDETALDESLWL TDAALHHVTA >Mature_170_residues MKTLAIEALTRAAFAPFGDVIETAGATRIPINLGTTTRFHDLARIDVADGGGRPLVNLFRGEPRALPFEVTMLERHPLGS QAFLPLDARPYLVVVAPAGELDPARIRAFVTHGWQGVNYAKGVWHHPLIALGQTSDFIVVDRGGEGVNLDETALDESLWL TDAALHHVTA
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=155, Percent_Identity=41.9354838709677, Blast_Score=127, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6322223, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18379; Mature: 18379
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLAIEALTRAAFAPFGDVIETAGATRIPINLGTTTRFHDLARIDVADGGGRPLVNLFR CCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC GEPRALPFEVTMLERHPLGSQAFLPLDARPYLVVVAPAGELDPARIRAFVTHGWQGVNYA CCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHEEEEECCCCCCCCCC KGVWHHPLIALGQTSDFIVVDRGGEGVNLDETALDESLWLTDAALHHVTA CCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKTLAIEALTRAAFAPFGDVIETAGATRIPINLGTTTRFHDLARIDVADGGGRPLVNLFR CCCHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEC GEPRALPFEVTMLERHPLGSQAFLPLDARPYLVVVAPAGELDPARIRAFVTHGWQGVNYA CCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCHHHEEEEECCCCCCCCCC KGVWHHPLIALGQTSDFIVVDRGGEGVNLDETALDESLWLTDAALHHVTA CCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA