The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026940

Identifier: 238026940

GI number: 238026940

Start: 1435890

End: 1436843

Strand: Direct

Name: 238026940

Synonym: bglu_1g13120

Alternate gene names: NA

Gene position: 1435890-1436843 (Clockwise)

Preceding gene: 238026939

Following gene: 238026941

Centisome position: 36.76

GC content: 68.55

Gene sequence:

>954_bases
ATGTCCCACGATTCCCACTATCCGCGCGACCTGATCGGCTACGGCCGGCATCCGGTGCAGGCGAACTGGCCGGGCCGCGC
GCGCGTCGCCGTGCAGTTCGTGCTCAATTACGAGGAGGGCGGCGAGAACTGCGTGCTGCACGGCGATCCGGCCTCCGAGC
AGTTCCTGTCCGAGATCGTCGGCGCGGCGGCCTATCCGGCGCGCCACATGAGCATGGAGTCGATCTACGAATACGGCTCG
CGCGCGGGCGTCTGGCGCATCCTGCGCGAGTTCGAGAGACGTGCGCTGCCGCTCACCGTATTCGGCGTCGGCATGGCGAT
CGAGCGGCATCCCGAGCTCGCGCGCGCGTTCGTCGAGCTGGGCCACGAGATCGCCTGCCACGGCTGGCGCTGGATTCATT
ATCAGGACGCCACTCCCGAGCGCGAGGCGGAGCACATGCGGCTCGGCATGGCGGCGATCGAGCGCGTCACGGGCGTGCGG
CCGCTCGGCTGGTACACGGGGCGCGACAGCCCGAACACGCACCGGCTCGTGGCCGAATACGGCGGCTTCCTGTACGACTC
CGACTACTACGGCGACGACCTGCCGTTCTGGATGGAGGTTCCCGTCACGGGCGGCGCGAGCGTGCCGCAGCTGATCGTGC
CGTATACGCTCGACACCAACGACATGCGCTTCGCGACGCCGCAGGGCTTCAACACCGCCGATCATTTCTTCCAGTACCTG
CGCGACGCGTTCGACGTGCTCTACGAGGAGGGCGACGAGGCGCCGAAGATGCTGTCGATCGGCATGCATTGCCGGCTGCT
CGGCCGGCCGGGGCGATTCCGCGCGCTGCAGCGCTTCCTCGACCATATCGAGCGGCACGACCGCGTCTGGGTCACGCGCC
GCGTCGACATCGCGCGCCACTGGCGCGAGCACCATCCGTATGCCAGCAGCCACCAAGGCGAAGGAGCGGCATGA

Upstream 100 bases:

>100_bases
CAAGCCTCGCATCGGCGCCGCCCCGCGCGCCGCCTGCGTCACCGCCGCCGGCGGCGCCGATGCGAGCCCGATCGACACGG
GTTTCTCTTCGTATCCAGCC

Downstream 100 bases:

>100_bases
AGGCGATGCACTACACGTTGGCGGAACTGAACGGGATGGCGGCCGAGGCCTTCGTCGCCGCGCTGTCGGGCATCTTCGAG
CATTCGCCGTGGGTCGCCGA

Product: putative xylanase/chitin deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Cyclic Imide Hydrolase; Deacetylase

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSHDSHYPRDLIGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS
RAGVWRILREFERRALPLTVFGVGMAIERHPELARAFVELGHEIACHGWRWIHYQDATPEREAEHMRLGMAAIERVTGVR
PLGWYTGRDSPNTHRLVAEYGGFLYDSDYYGDDLPFWMEVPVTGGASVPQLIVPYTLDTNDMRFATPQGFNTADHFFQYL
RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVTRRVDIARHWREHHPYASSHQGEGAA

Sequences:

>Translated_317_residues
MSHDSHYPRDLIGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS
RAGVWRILREFERRALPLTVFGVGMAIERHPELARAFVELGHEIACHGWRWIHYQDATPEREAEHMRLGMAAIERVTGVR
PLGWYTGRDSPNTHRLVAEYGGFLYDSDYYGDDLPFWMEVPVTGGASVPQLIVPYTLDTNDMRFATPQGFNTADHFFQYL
RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVTRRVDIARHWREHHPYASSHQGEGAA
>Mature_316_residues
SHDSHYPRDLIGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGSR
AGVWRILREFERRALPLTVFGVGMAIERHPELARAFVELGHEIACHGWRWIHYQDATPEREAEHMRLGMAAIERVTGVRP
LGWYTGRDSPNTHRLVAEYGGFLYDSDYYGDDLPFWMEVPVTGGASVPQLIVPYTLDTNDMRFATPQGFNTADHFFQYLR
DAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVTRRVDIARHWREHHPYASSHQGEGAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36420; Mature: 36289

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDSHYPRDLIGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV
CCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
GAAAYPARHMSMESIYEYGSRAGVWRILREFERRALPLTVFGVGMAIERHPELARAFVEL
HHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHH
GHEIACHGWRWIHYQDATPEREAEHMRLGMAAIERVTGVRPLGWYTGRDSPNTHRLVAEY
CCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH
GGFLYDSDYYGDDLPFWMEVPVTGGASVPQLIVPYTLDTNDMRFATPQGFNTADHFFQYL
CCEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH
RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVTRRVDIARH
HHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
WREHHPYASSHQGEGAA
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SHDSHYPRDLIGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV
CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
GAAAYPARHMSMESIYEYGSRAGVWRILREFERRALPLTVFGVGMAIERHPELARAFVEL
HHHHCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHH
GHEIACHGWRWIHYQDATPEREAEHMRLGMAAIERVTGVRPLGWYTGRDSPNTHRLVAEY
CCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH
GGFLYDSDYYGDDLPFWMEVPVTGGASVPQLIVPYTLDTNDMRFATPQGFNTADHFFQYL
CCEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH
RDAFDVLYEEGDEAPKMLSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVTRRVDIARH
HHHHHHHHHCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
WREHHPYASSHQGEGAA
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA