| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pucL [H]
Identifier: 238026941
GI number: 238026941
Start: 1436840
End: 1437361
Strand: Direct
Name: pucL [H]
Synonym: bglu_1g13130
Alternate gene names: 238026941
Gene position: 1436840-1437361 (Clockwise)
Preceding gene: 238026940
Following gene: 238026942
Centisome position: 36.78
GC content: 70.11
Gene sequence:
>522_bases ATGAAGGCGATGCACTACACGTTGGCGGAACTGAACGGGATGGCGGCCGAGGCCTTCGTCGCCGCGCTGTCGGGCATCTT CGAGCATTCGCCGTGGGTCGCCGAGGCGGCCGCGGCCGGGCGCCCCTATGCAAGCGTTGACGCGCTGCACACGGCGATGT GCGGGATCGTTGAGCAGGCCGGCGAGGCGCGCCGGCTCGCGCTCGTGAACGCCCACCCGGAGCTGGCCGGCAAGGCCGCC GTGCGCGGCGAGCTGACCGCCGAATCGACGCGCGAGCAGAGCGGTGCCGGGCTCGACCAGTGCTCGCAGGCCGAGTTCGA CCGGCTGCAGCAGCTCAATCTCGCCTATCGCGACAGGTTCGGTTTCCCGTTCATCCTCGCCGTGCGCGGCTACGACCGGC ACGGCATCATCGCGAACTTCGAGTCGCGTCTGGCCAATACGCGCGAGGCGGAACTGCGCGCGAGCCTGGCGCAGATCTAC CGGATCGCGCGCTTCCGGCTCGACGACCTGATCGGCGCCTGA
Upstream 100 bases:
>100_bases AGCGGCACGACCGCGTCTGGGTCACGCGCCGCGTCGACATCGCGCGCCACTGGCGCGAGCACCATCCGTATGCCAGCAGC CACCAAGGCGAAGGAGCGGC
Downstream 100 bases:
>100_bases GCGGCGCTTCACCACGGCGCGCGACGGCCGCCTTTTCGCGCCGCCCCGGCGCCCGCCGGGTCCGCGCGAGCGCGGGCCCG GCACTTTCCACGAACCGAGA
Product: Chitooligosaccharide deacetylase
Products: NA
Alternate protein names: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase; Uricase; Urate oxidase [H]
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKAMHYTLAELNGMAAEAFVAALSGIFEHSPWVAEAAAAGRPYASVDALHTAMCGIVEQAGEARRLALVNAHPELAGKAA VRGELTAESTREQSGAGLDQCSQAEFDRLQQLNLAYRDRFGFPFILAVRGYDRHGIIANFESRLANTREAELRASLAQIY RIARFRLDDLIGA
Sequences:
>Translated_173_residues MKAMHYTLAELNGMAAEAFVAALSGIFEHSPWVAEAAAAGRPYASVDALHTAMCGIVEQAGEARRLALVNAHPELAGKAA VRGELTAESTREQSGAGLDQCSQAEFDRLQQLNLAYRDRFGFPFILAVRGYDRHGIIANFESRLANTREAELRASLAQIY RIARFRLDDLIGA >Mature_173_residues MKAMHYTLAELNGMAAEAFVAALSGIFEHSPWVAEAAAAGRPYASVDALHTAMCGIVEQAGEARRLALVNAHPELAGKAA VRGELTAESTREQSGAGLDQCSQAEFDRLQQLNLAYRDRFGFPFILAVRGYDRHGIIANFESRLANTREAELRASLAQIY RIARFRLDDLIGA
Specific function: Catalyzes two steps in the degradation of uric acid, i.e. the oxidation of uric acid to 5-hydroxyisourate (HIU) and the stereoselective decarboxylation of 2-oxo-4-hydroxy-4-carboxy-5- ureidoimidazoline (OHCU) to (S)-allantoin [H]
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the uricase family [H]
Homologues:
Organism=Homo sapiens, GI157743280, Length=166, Percent_Identity=36.7469879518072, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018020 - InterPro: IPR017580 - InterPro: IPR002042 - InterPro: IPR019842 [H]
Pfam domain/function: PF09349 OHCU_decarbox; PF01014 Uricase [H]
EC number: =1.7.3.3 [H]
Molecular weight: Translated: 18836; Mature: 18836
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMHYTLAELNGMAAEAFVAALSGIFEHSPWVAEAAAAGRPYASVDALHTAMCGIVEQA CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC GEARRLALVNAHPELAGKAAVRGELTAESTREQSGAGLDQCSQAEFDRLQQLNLAYRDRF CCHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC GFPFILAVRGYDRHGIIANFESRLANTREAELRASLAQIYRIARFRLDDLIGA CCCEEEEEECCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAMHYTLAELNGMAAEAFVAALSGIFEHSPWVAEAAAAGRPYASVDALHTAMCGIVEQA CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC GEARRLALVNAHPELAGKAAVRGELTAESTREQSGAGLDQCSQAEFDRLQQLNLAYRDRF CCHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC GFPFILAVRGYDRHGIIANFESRLANTREAELRASLAQIYRIARFRLDDLIGA CCCEEEEEECCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]