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The map label for this gene is tadA [H]

Identifier: 238026935

GI number: 238026935

Start: 1430598

End: 1431206

Strand: Direct

Name: tadA [H]

Synonym: bglu_1g13070

Alternate gene names: 238026935

Gene position: 1430598-1431206 (Clockwise)

Preceding gene: 238026934

Following gene: 238026936

Centisome position: 36.62

GC content: 73.56

Gene sequence:

>609_bases
ATGAACGCCGAATCCGGCGATTCGTTACTCCCGCCCGCCTCGCCAGACCCCGCCGCCTGCGCGCTGCCGCCGCTCGATCC
GGGCGCCGAGCGCGACCGCCGCTTCATGCGGCTCGCGCTGGCCGCGGCCGACGCGGCACGGGCCGCCGGCGAAGTGCCGG
TGGGCGCCGTGCTGGTGCGCGGCGACCAGGTAATCGCGCGCGGCTTCAACCATCCCATCAGCGGCCACGATCCGTCCGCG
CATGCCGAAATGGCCGCTCTGCGCGAGGCCGCGCACACGCTCGGCAACTATCGCCTGCCCGGCTGCGAGCTCTACGTCAC
GCTCGAACCATGCCTGATGTGCTCCGGTGCGATCATGCACGCGCGTATCGCGCGCGTGGTGTACGGCGCGGCGGATCCGA
AAACGGGCGCCTGCGGTAGTGTGGTCGACGCCTTCGCGAATCCGCAGCTGAACCACCACACGAGCGTGACGGGCGGGGTG
CTGGCCGACGAGTGCGGCCACACGCTGCGTGCGTTCTTCGCCGAACGCCGCCGTGCCGCCCGCGAGGCACGGCGCGCGCG
CGCCGCGTCCGCCGGAGCGTGCGATTCGGCCGCGCCCGGCGCCGACTGA

Upstream 100 bases:

>100_bases
GCGGCGGCCCCCTCGTGGTGCCGCGCGAATACTGCCGCCGCATTGCCGAACGCCTGTCCGAGCGCGCGCTCGACGACGGC
GCCGGCGAAGCGGGGGCCGC

Downstream 100 bases:

>100_bases
ACCAGTCGCGGTGGCGCGGCTCTAATCGGGCAATCCCAGCCGGGCCAGTCCCTTTTTTCTCCGCGAGCCGATGACGAATC
CCTCCTCCCTGCCACGCACG

Product: CMP/dCMP deaminase, zinc-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNAESGDSLLPPASPDPAACALPPLDPGAERDRRFMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSA
HAEMAALREAAHTLGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTGACGSVVDAFANPQLNHHTSVTGGV
LADECGHTLRAFFAERRRAAREARRARAASAGACDSAAPGAD

Sequences:

>Translated_202_residues
MNAESGDSLLPPASPDPAACALPPLDPGAERDRRFMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSA
HAEMAALREAAHTLGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTGACGSVVDAFANPQLNHHTSVTGGV
LADECGHTLRAFFAERRRAAREARRARAASAGACDSAAPGAD
>Mature_202_residues
MNAESGDSLLPPASPDPAACALPPLDPGAERDRRFMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSA
HAEMAALREAAHTLGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTGACGSVVDAFANPQLNHHTSVTGGV
LADECGHTLRAFFAERRRAAREARRARAASAGACDSAAPGAD

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=159, Percent_Identity=30.8176100628931, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI19923945, Length=69, Percent_Identity=50.7246376811594, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI145693172, Length=156, Percent_Identity=50.6410256410256, Blast_Score=167, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI17541138, Length=149, Percent_Identity=34.8993288590604, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17554608, Length=99, Percent_Identity=39.3939393939394, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17555996, Length=94, Percent_Identity=38.2978723404255, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355527, Length=145, Percent_Identity=38.6206896551724, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 20855; Mature: 20855

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAESGDSLLPPASPDPAACALPPLDPGAERDRRFMRLALAAADAARAAGEVPVGAVLVR
CCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GDQVIARGFNHPISGHDPSAHAEMAALREAAHTLGNYRLPGCELYVTLEPCLMCSGAIMH
CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHH
ARIARVVYGAADPKTGACGSVVDAFANPQLNHHTSVTGGVLADECGHTLRAFFAERRRAA
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
REARRARAASAGACDSAAPGAD
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAESGDSLLPPASPDPAACALPPLDPGAERDRRFMRLALAAADAARAAGEVPVGAVLVR
CCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GDQVIARGFNHPISGHDPSAHAEMAALREAAHTLGNYRLPGCELYVTLEPCLMCSGAIMH
CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHH
ARIARVVYGAADPKTGACGSVVDAFANPQLNHHTSVTGGVLADECGHTLRAFFAERRRAA
HHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
REARRARAASAGACDSAAPGAD
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]