| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yxlA [H]
Identifier: 238026930
GI number: 238026930
Start: 1424615
End: 1426060
Strand: Direct
Name: yxlA [H]
Synonym: bglu_1g13020
Alternate gene names: 238026930
Gene position: 1424615-1426060 (Clockwise)
Preceding gene: 238026929
Following gene: 238026933
Centisome position: 36.47
GC content: 67.7
Gene sequence:
>1446_bases GTGGCGAACGAGAACAAGGACGAGAGAGCGGGCCGCGCCGGCGGCGTATTGATCGAATCGCGGACGATCGACTTCATTCC CGACGCGGAGCGTCACGGCCGGCTCGGCAGCCAGTTCACGCTGTGGCTGTCGGCGAACCTGCAGGTAACGGCGATCGTTA CCGGCGCGCTGGCGGTGGTGCTCGGCGGCGACGTGTTCTGGTCACTCGTCGCGCTGCTGCTCGGCCAACTGCTGGGCGGC GCGGTGATGGCGCTGCACGGCGCGCAGGGCCCGCAGCTGGGCCTGCCGCAGATGATCTCGAGCCGCGTGCAGTTCGGCGT CCATGGCGCGACGATCCCGATCCTGCTGGTCTGCCTGATGTACGTCGGCTTTTCGGCGAGCGGCACGGTGCTCGCGGGCG CGGCGCTCGCGCAGTTGCTCGGCGTTGGCGAGGTGGCCGGCATCGCGGTCTTCTCGGCCTGCATCGTGGTGTTGACGGTG CTCGGCTACCGCACGATCCATCTGATCGGCCGCCTCGCGAGCCTGATCGGCGTGGTCGCGTTCGTGTTCATGTACGCGCG GTTGTTTTCGCAGCACGACGTCGGCCTGCTGCTCGCCAACCGGCATTTCTCGATCGCGAGCTTCCTGCTGTCGATGTCGC TGTCGGCGTCATGGCAGATCGCGTTCGGCCCCTATGTCGCGGATTATTCGCGCTATCTGCCGCGTACCACCTCGTCGCTC GGCACCTTCCTCGCGGTGGGGCTCGGCTCGGTGCTCGGCGCGCAGGCGGCGATGGTGTTCGGCGTGTTCGCGGCGGCGCT CGCGGGCGGGCAGTTCGCGCATCACGAGGTCGCCTTCATCGTCGGGCTCGGCTCGTCGGGCGCCGCGGCCGCGCTGCTGT ATTTCAGCATCGCGTTCGGCAAGCTCACGGTGACGACGCTCAATGCCTACGGCAGCTTCATGTCGATGGCCACCATCGTC AGCGGCTTCGGCGGCCAGCGCACGATCCCGCATCGCGCCCGGCTGGCGGCGATCCTCGCGATGGTGGCGCTCTCGACGGC GCTCGCGGTCGCAGGCCGCGATTCGTTCCTGAAGGAATTCACGGCCTTCATCCTGTTCCTGCTCGCGTTCTTCACGCCTT GGAGCGCGATCAATCTGGTCGATTACTATGGCTTCACGCGTTCGCGTTACGACGTGCCGGCGCTGTCCGACCCCGACGGC CGCTACGGCCATTGGAACCGCACCGCGATCGGCGTGTATCTGGTCGGCATCGCCGTGCAGCTGCCGTTCCTGTCCACGAG CTTCTACACCGGCCCCCTCGTCGATGCGCTCGGCGGCGCCGACATTTCATGGATTCTCGGCCTGGTCGTGCCGGCGCTGC TTTACTACGTCTGCGCACGCGCCTCGGCGCGCCGTATTCCCGAACACCTGATCCTGCCCGCCGAGGTGTCGGGCGGCCGT GAATGA
Upstream 100 bases:
>100_bases TGACGATGCCAATTTGGCCGGTTCAGATGCGAGGCTGGAGCCGCCCGATCCCACGACGACCGGCGGGCGGCCATCCCAAC CCGGAACTGGAGCGTTTGCC
Downstream 100 bases:
>100_bases GGCCGGCGCGGTTCGCGAGTGCCGATCGGGTTCCATGACGGACGCGGATCGCACGACCGACGGCGGCACGGTGACGCGGC GGGCGGCAGGGCGGGCGGCG
Product: Purine-cytosine permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MANENKDERAGRAGGVLIESRTIDFIPDAERHGRLGSQFTLWLSANLQVTAIVTGALAVVLGGDVFWSLVALLLGQLLGG AVMALHGAQGPQLGLPQMISSRVQFGVHGATIPILLVCLMYVGFSASGTVLAGAALAQLLGVGEVAGIAVFSACIVVLTV LGYRTIHLIGRLASLIGVVAFVFMYARLFSQHDVGLLLANRHFSIASFLLSMSLSASWQIAFGPYVADYSRYLPRTTSSL GTFLAVGLGSVLGAQAAMVFGVFAAALAGGQFAHHEVAFIVGLGSSGAAAALLYFSIAFGKLTVTTLNAYGSFMSMATIV SGFGGQRTIPHRARLAAILAMVALSTALAVAGRDSFLKEFTAFILFLLAFFTPWSAINLVDYYGFTRSRYDVPALSDPDG RYGHWNRTAIGVYLVGIAVQLPFLSTSFYTGPLVDALGGADISWILGLVVPALLYYVCARASARRIPEHLILPAEVSGGR E
Sequences:
>Translated_481_residues MANENKDERAGRAGGVLIESRTIDFIPDAERHGRLGSQFTLWLSANLQVTAIVTGALAVVLGGDVFWSLVALLLGQLLGG AVMALHGAQGPQLGLPQMISSRVQFGVHGATIPILLVCLMYVGFSASGTVLAGAALAQLLGVGEVAGIAVFSACIVVLTV LGYRTIHLIGRLASLIGVVAFVFMYARLFSQHDVGLLLANRHFSIASFLLSMSLSASWQIAFGPYVADYSRYLPRTTSSL GTFLAVGLGSVLGAQAAMVFGVFAAALAGGQFAHHEVAFIVGLGSSGAAAALLYFSIAFGKLTVTTLNAYGSFMSMATIV SGFGGQRTIPHRARLAAILAMVALSTALAVAGRDSFLKEFTAFILFLLAFFTPWSAINLVDYYGFTRSRYDVPALSDPDG RYGHWNRTAIGVYLVGIAVQLPFLSTSFYTGPLVDALGGADISWILGLVVPALLYYVCARASARRIPEHLILPAEVSGGR E >Mature_480_residues ANENKDERAGRAGGVLIESRTIDFIPDAERHGRLGSQFTLWLSANLQVTAIVTGALAVVLGGDVFWSLVALLLGQLLGGA VMALHGAQGPQLGLPQMISSRVQFGVHGATIPILLVCLMYVGFSASGTVLAGAALAQLLGVGEVAGIAVFSACIVVLTVL GYRTIHLIGRLASLIGVVAFVFMYARLFSQHDVGLLLANRHFSIASFLLSMSLSASWQIAFGPYVADYSRYLPRTTSSLG TFLAVGLGSVLGAQAAMVFGVFAAALAGGQFAHHEVAFIVGLGSSGAAAALLYFSIAFGKLTVTTLNAYGSFMSMATIVS GFGGQRTIPHRARLAAILAMVALSTALAVAGRDSFLKEFTAFILFLLAFFTPWSAINLVDYYGFTRSRYDVPALSDPDGR YGHWNRTAIGVYLVGIAVQLPFLSTSFYTGPLVDALGGADISWILGLVVPALLYYVCARASARRIPEHLILPAEVSGGRE
Specific function: Transport Of Allantoin (By Similarity). [C]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320902, Length=265, Percent_Identity=28.3018867924528, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 50651; Mature: 50520
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANENKDERAGRAGGVLIESRTIDFIPDAERHGRLGSQFTLWLSANLQVTAIVTGALAVV CCCCCCHHHCCCCCCEEEECCCCCCCCCCHHCCCCCCEEEEEEECCEEEEEHHHHHHHHH LGGDVFWSLVALLLGQLLGGAVMALHGAQGPQLGLPQMISSRVQFGVHGATIPILLVCLM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH YVGFSASGTVLAGAALAQLLGVGEVAGIAVFSACIVVLTVLGYRTIHLIGRLASLIGVVA HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFMYARLFSQHDVGLLLANRHFSIASFLLSMSLSASWQIAFGPYVADYSRYLPRTTSSL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHH GTFLAVGLGSVLGAQAAMVFGVFAAALAGGQFAHHEVAFIVGLGSSGAAAALLYFSIAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC KLTVTTLNAYGSFMSMATIVSGFGGQRTIPHRARLAAILAMVALSTALAVAGRDSFLKEF CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TAFILFLLAFFTPWSAINLVDYYGFTRSRYDVPALSDPDGRYGHWNRTAIGVYLVGIAVQ HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LPFLSTSFYTGPLVDALGGADISWILGLVVPALLYYVCARASARRIPEHLILPAEVSGGR CCHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCC E C >Mature Secondary Structure ANENKDERAGRAGGVLIESRTIDFIPDAERHGRLGSQFTLWLSANLQVTAIVTGALAVV CCCCCHHHCCCCCCEEEECCCCCCCCCCHHCCCCCCEEEEEEECCEEEEEHHHHHHHHH LGGDVFWSLVALLLGQLLGGAVMALHGAQGPQLGLPQMISSRVQFGVHGATIPILLVCLM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH YVGFSASGTVLAGAALAQLLGVGEVAGIAVFSACIVVLTVLGYRTIHLIGRLASLIGVVA HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFMYARLFSQHDVGLLLANRHFSIASFLLSMSLSASWQIAFGPYVADYSRYLPRTTSSL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHH GTFLAVGLGSVLGAQAAMVFGVFAAALAGGQFAHHEVAFIVGLGSSGAAAALLYFSIAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHC KLTVTTLNAYGSFMSMATIVSGFGGQRTIPHRARLAAILAMVALSTALAVAGRDSFLKEF CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH TAFILFLLAFFTPWSAINLVDYYGFTRSRYDVPALSDPDGRYGHWNRTAIGVYLVGIAVQ HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LPFLSTSFYTGPLVDALGGADISWILGLVVPALLYYVCARASARRIPEHLILPAEVSGGR CCHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]