| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is guaB [H]
Identifier: 238026926
GI number: 238026926
Start: 1419534
End: 1420994
Strand: Direct
Name: guaB [H]
Synonym: bglu_1g12980
Alternate gene names: 238026926
Gene position: 1419534-1420994 (Clockwise)
Preceding gene: 238026925
Following gene: 238026927
Centisome position: 36.34
GC content: 67.9
Gene sequence:
>1461_bases ATGCGTCTCATCCAAAAAGCACTCACTTTCGATGACGTGCTCCTCGTCCCGGCGTTCTCCGACGTCCTGCCGCGCGACAC CAGCCTCAAGACCCGACTCACCCGCAACATCGCCCTGAACATGCCGCTCGTGTCCGCCGCCATGGATACGGTGACGGAAG GCCGTCTCGCGATCGCGATGGCGCAGCAGGGCGGCGTGGGGATCGTCCACAAGAACCTGACGCCTGCCGAGCAGGCGCGC GAGGTCGCCAAGGTCAAGCGCTTCGAATCGGGCGTGGTGCGCGATCCGATCACGGTGCCGCCCACCATGAAGGTGCGCGA CGTGATCGCGCTGTCGCGCCAGCATGGCATTTCCGGCTTCCCGGTCGTCGAGGGGGCGCAACTCGTCGGCATCGTCACGA ACCGCGATCTGCGCTTCGAAAGCCGCCTCGACGACGTGGTGCAGTCGATCATGACGCCGCGCGAGCGTCTCGTGACGGTC AAGGAAGGCACGCCGCTCGCCGACGCCAAGGCGCTCATGCACAGCCACCGCCTCGAGCGCGTGCTGGTGGTGAACGACGC GTTCGAGCTGCGCGGCCTGATGACGGTGAAGGACATCACGAAGCAGACCGAGCACCCGGACGCCTGCAAGGACGAGCACG GCAAGCTGCGCGTGGGCGCCGCCGTGGGCGTGGGCGCCGACAACGAGGAGCGCGTCGAGCTGCTGGTGCAGGCCGGGGTC GACGTGATCGTCGTCGATACCGCGCACGGCCACAGCAAGGGCGTGCTCGAGCGGGTGCGCTGGGTCAAGCAGAATTTCCC GCGGGTCGAGGTGATCGGCGGCAACATCGCCACCGCCGCCGCCGCGAAGGCGCTGGTCGACTACGGCGCGGACGCCGTCA AGGTCGGCATCGGCCCCGGCTCGATCTGCACCACGCGGATCGTGGCTGGCGTGGGCGTGCCGCAGATCAGCGCGATCGCC AACGTCTCCGAGGCGCTGCGCGGCACCGGCGTGCCCTGCATCGCCGACGGCGGCGTGCGCTTCTCGGGCGACGTGTCGAA GGCGCTGGCCGCCGGCGCGAACGCGGTGATGATGGGCAGCATGCTGGCCGGCACCGAGGAAGCGCCGGGCGACGTGTTCC TGTACCAGGGCCGCCAGTACAAGTCGTACCGCGGCATGGGCTCGGTGGGTGCGATGAAGGACGGCGCTGCCGACCGCTAC TTCCAGGACAATTCCGCGAACATCGACAAGCTCGTGCCCGAAGGTATCGAAGGGCGCGTCGCCTACAAGGGTTCGGTCAA CGCGATCCTGTTCCAGCTCGTCGGCGGCGTGCGCGCGAGCATGGGCTACTGCGGTTGCCGCACCATCGAGGAATTGCACG ACAAGGCCGAGTTCGTCCAGATCACGGCGGCCGGCATGCGCGAATCTCACGTCCACGACGTGCAGATCACCAAGGAAGCC CCCAACTACCACGTGGACTGA
Upstream 100 bases:
>100_bases GAAGCGAATGGCTGCCTGGGAAGGCGCTAAGCCGTTGTTCGTGTTGTGAAAATCTGCCGCGCATCGCGTATAATTCGGCT TTGCGCCCATAGGATCTGCC
Downstream 100 bases:
>100_bases ACGCCAATGAAACCACTGCTGCGCGTCGTACTCGTCATCGATGCCCTGCTGCTGCTGGCAGGGGGTGTGCTGTTCGTGCT GACGCCCTGGAAGGGGCTTT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNIALNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPTMKVRDVIALSRQHGISGFPVVEGAQLVGIVTNRDLRFESRLDDVVQSIMTPRERLVTV KEGTPLADAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPRVEVIGGNIATAAAAKALVDYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALRGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMLAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCRTIEELHDKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Sequences:
>Translated_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNIALNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPTMKVRDVIALSRQHGISGFPVVEGAQLVGIVTNRDLRFESRLDDVVQSIMTPRERLVTV KEGTPLADAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPRVEVIGGNIATAAAAKALVDYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALRGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMLAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCRTIEELHDKAEFVQITAAGMRESHVHDVQITKEA PNYHVD >Mature_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNIALNMPLVSAAMDTVTEGRLAIAMAQQGGVGIVHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPTMKVRDVIALSRQHGISGFPVVEGAQLVGIVTNRDLRFESRLDDVVQSIMTPRERLVTV KEGTPLADAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRVGAAVGVGADNEERVELLVQAGV DVIVVDTAHGHSKGVLERVRWVKQNFPRVEVIGGNIATAAAAKALVDYGADAVKVGIGPGSICTTRIVAGVGVPQISAIA NVSEALRGTGVPCIADGGVRFSGDVSKALAAGANAVMMGSMLAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVNAILFQLVGGVRASMGYCGCRTIEELHDKAEFVQITAAGMRESHVHDVQITKEA PNYHVD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=479, Percent_Identity=41.9624217118998, Blast_Score=368, Evalue=1e-102, Organism=Homo sapiens, GI156616279, Length=479, Percent_Identity=41.9624217118998, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=479, Percent_Identity=41.9624217118998, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=479, Percent_Identity=41.9624217118998, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=40.4564315352697, Blast_Score=361, Evalue=1e-100, Organism=Homo sapiens, GI217035152, Length=475, Percent_Identity=41.8947368421053, Blast_Score=361, Evalue=1e-100, Organism=Homo sapiens, GI217035148, Length=479, Percent_Identity=41.1273486430063, Blast_Score=355, Evalue=4e-98, Organism=Homo sapiens, GI217035150, Length=479, Percent_Identity=39.0396659707724, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=35.1145038167939, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541956, Length=261, Percent_Identity=36.3984674329502, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI50541954, Length=261, Percent_Identity=36.3984674329502, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI50541952, Length=261, Percent_Identity=36.3984674329502, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI50541948, Length=261, Percent_Identity=36.3984674329502, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=62.4229979466119, Blast_Score=573, Evalue=1e-165, Organism=Escherichia coli, GI1786293, Length=239, Percent_Identity=33.8912133891213, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71994385, Length=477, Percent_Identity=37.9454926624738, Blast_Score=304, Evalue=8e-83, Organism=Caenorhabditis elegans, GI71994389, Length=424, Percent_Identity=39.622641509434, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=35.1464435146443, Blast_Score=160, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=39.344262295082, Blast_Score=358, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=39.4628099173554, Blast_Score=352, Evalue=8e-98, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.0495867768595, Blast_Score=343, Evalue=3e-95, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=39.1812865497076, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6319353, Length=142, Percent_Identity=35.9154929577465, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=41.407867494824, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=41.407867494824, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=42.1768707482993, Blast_Score=328, Evalue=6e-90,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51926; Mature: 51926
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNIALNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHHHHEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPAEQAREVAKVKRFESGVVRDPITVPPTMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PVVEGAQLVGIVTNRDLRFESRLDDVVQSIMTPRERLVTVKEGTPLADAKALMHSHRLER CEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRVGAAVGVGADNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPRVEVIGGNIATAAAAKALVDYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSEALRGTGVPCIADGGVRFSGDVSKALAAGANAVMMGS HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCCEEHHH MLAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAILFQLVGGVRASMGYCGCRTIEELHDKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHEEEEEECCCCCCCCCEEEEEECC PNYHVD CCCCCC >Mature Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNIALNMPLVSAAMDTVTEGRLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHHHHEEECCCHHHHHHHHHCCCCEEEEE AQQGGVGIVHKNLTPAEQAREVAKVKRFESGVVRDPITVPPTMKVRDVIALSRQHGISGF ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PVVEGAQLVGIVTNRDLRFESRLDDVVQSIMTPRERLVTVKEGTPLADAKALMHSHRLER CEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRVGAAVGVGADNEERVELLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCC DVIVVDTAHGHSKGVLERVRWVKQNFPRVEVIGGNIATAAAAKALVDYGADAVKVGIGPG CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC SICTTRIVAGVGVPQISAIANVSEALRGTGVPCIADGGVRFSGDVSKALAAGANAVMMGS HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEECCCHHHHHHCCCCCEEHHH MLAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVNAILFQLVGGVRASMGYCGCRTIEELHDKAEFVQITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHEEEEEECCCCCCCCCEEEEEECC PNYHVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA