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The map label for this gene is rnfH [H]

Identifier: 238026925

GI number: 238026925

Start: 1417702

End: 1418025

Strand: Direct

Name: rnfH [H]

Synonym: bglu_1g12960

Alternate gene names: 238026925

Gene position: 1417702-1418025 (Clockwise)

Preceding gene: 238026924

Following gene: 238026926

Centisome position: 36.29

GC content: 70.06

Gene sequence:

>324_bases
ATGCCGGCCGTGCAGGTGTGCTATGCGCTGCCCACGCAGCAGACGCTGATCGATCTGGACGTGCCCGAGAACACCACCGT
GCGCGCGGCGATCGAGGCGAGCGGGATCGTGGCCCGGCATCCCGAGATCGACTTGAGCGTCGCGAAGACGGGCGTGTTCG
GCAAGCTCGCGCCGCTCGACGCCGTGCTGCGCGACGGCGACCGCGTCGAGATCTACCGGCCGCTCGTGGTCGATCCGAAG
GCGGCGCGCCAGCGCCGTGTGGACAAGACGCGCCGCGAAGGGTCCGTGGAGGGCCGCAAGTGGCAGCACAAGGATTCGCG
CTGA

Upstream 100 bases:

>100_bases
TCCTCGAGAAGATCATCGGCCCGGTGTTCAGCCACATCGCGAACACCTTCGTCGATTCGTTCGTCAAGCGCGCCGACCAG
CGCTACGGGAAGGGCTGAGC

Downstream 100 bases:

>100_bases
GCGCGTGCATGCGCGCTGCCCGCGGGCCTGGCGGTCCCGGCCCGGGCCATCCGGCGGGTTCGCTGCTCGCCGGGCCGGAG
TTCGCGTGGCCGCCTGCGGC

Product: TGS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPAVQVCYALPTQQTLIDLDVPENTTVRAAIEASGIVARHPEIDLSVAKTGVFGKLAPLDAVLRDGDRVEIYRPLVVDPK
AARQRRVDKTRREGSVEGRKWQHKDSR

Sequences:

>Translated_107_residues
MPAVQVCYALPTQQTLIDLDVPENTTVRAAIEASGIVARHPEIDLSVAKTGVFGKLAPLDAVLRDGDRVEIYRPLVVDPK
AARQRRVDKTRREGSVEGRKWQHKDSR
>Mature_106_residues
PAVQVCYALPTQQTLIDLDVPENTTVRAAIEASGIVARHPEIDLSVAKTGVFGKLAPLDAVLRDGDRVEIYRPLVVDPKA
ARQRRVDKTRREGSVEGRKWQHKDSR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=88, Percent_Identity=46.5909090909091, Blast_Score=82, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 11914; Mature: 11783

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQVCYALPTQQTLIDLDVPENTTVRAAIEASGIVARHPEIDLSVAKTGVFGKLAPLD
CCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCCCHHH
AVLRDGDRVEIYRPLVVDPKAARQRRVDKTRREGSVEGRKWQHKDSR
HHHCCCCEEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAVQVCYALPTQQTLIDLDVPENTTVRAAIEASGIVARHPEIDLSVAKTGVFGKLAPLD
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEEECCCCCCCCCHHH
AVLRDGDRVEIYRPLVVDPKAARQRRVDKTRREGSVEGRKWQHKDSR
HHHCCCCEEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA