| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026896
Identifier: 238026896
GI number: 238026896
Start: 1385596
End: 1386900
Strand: Direct
Name: 238026896
Synonym: bglu_1g12640
Alternate gene names: NA
Gene position: 1385596-1386900 (Clockwise)
Preceding gene: 238026895
Following gene: 238026897
Centisome position: 35.47
GC content: 72.49
Gene sequence:
>1305_bases ATGGACGAGTTGACACTCGGGTTGGTCGGTACTGGCGTGGTCGTGATCGGCGGCATCTGGATCTACAACATGTGGCAGGC CGCGAAAGTGCGCCGCCGGATGCCGCGGCCGATGCCGGCCGACGCGGCCGACACGCTGGCGCGCCACGAGCGCGACGACG ACGCGCCGTTCATCGAACCGGTGCGGCAGCCCGCGCGCCGCGCGGCGGCCCCGCTCGAGCCGGTGGCGCCGCCGGCCGCG GCCGGCGCGGGCGATCGCGACAGGCGCGTCGAGCCGACCTTCGGCGGCGCGCCGGCGCAGCCGGCCCCGATCGATACGCC GGCCGACCTGCAGGCCGACGAGACGCTGACGGCCGGGGCCACCGACCCGGCGGAGCGGGACGCCGAGGCGGGCGAGGGCG CCGGGCCGGCCGAAGCGTCGGCCGGTGCCGGCGAGGCCGTCGCGGAGCCGGTGCTGCCCGCCGCCACCACGATCTCGGCC GCGCCGCCGGCCATCGTCGACCGCCGCATCGACTGCATCGTGCCGATCCGGCTCGGCGCGCCGCTCGCCGGCGAGCGCAT CGTGCCGGCCGCGCAGCGGCTGCGCCGCGCCGGCAGCAAGCCCGTGCATATCGAGGGCAAGCCCGAGGGCGGCAGCGGCT GGGAACTGCTGCAGAACGGGGTGCGCTACGAGGAACTGCGCGCGGCCGCGCAGCTCGCGAACCGCAGCGGTCCGCTCAAC GAGCTCGAGTATTCGGAATTCGTCTCGGGCGTCAACCAGTTCGCCGACGCGATCGACGGCGCGCCCGAGTTCCCCGACAT GCTCGAGACCGTCTCGATGGCGCGCGAGCTCGACGGATTCGCCGCGCAGTGCGACGCGCAGCTGTCGATCAACGTGATGT CGGACGGCGCGCCGTGGTCGGCGAACTACGTGCAGGCGGTCGCCTCGCAGGACGGCCTGCTGCTGTCGCGCGACGGCACG CGCTTCGTCAAGCTCGACGCGAAGCAGAACCCGGTGTTCATGCTGCAGTTCGGCGACACCAACTTCCTGCGCGACGACCT GACCTACAAGGGCGGCAACATGATCACGCTGGTGCTCGACGTGCCGGTGGCCGACGAGGACATCCTGCCGTTCAAGCTGA TGTGCGACTACGCGAAATCGCTGTCGGACCGCATCGGCGCGCAGGTGGTCGACGATTCGCGCCGGCCGCTGCCCGAATCG ACGCTGGTGGCGATCGAGCAGCAACTGATGAAGCTCTACGCGAAGCTCGAGGAAGCCGGGATTCCGGCCGGCTCGCCGGT CACGCGGCGGCTGTTCAGCCAGTGA
Upstream 100 bases:
>100_bases CGACATGGAAACGGCCGCCGGTTTTGCACAGAATTTGAATTGATGGGCGCGGGCCGCGCCGGCGCGGCGCGCTCGAAGCA GCATTCATGATGGAGCATGC
Downstream 100 bases:
>100_bases GCACCGGCCGCGGGCCGGATTCCGGTTGAGCATCGCGGGTTTCTCCCATTCGGCAGGCGCGCCAAAGCGCGCGCCGCCTG AGATAATCGTCTCCTGATTG
Product: ZipA FtsZ-binding region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDELTLGLVGTGVVVIGGIWIYNMWQAAKVRRRMPRPMPADAADTLARHERDDDAPFIEPVRQPARRAAAPLEPVAPPAA AGAGDRDRRVEPTFGGAPAQPAPIDTPADLQADETLTAGATDPAERDAEAGEGAGPAEASAGAGEAVAEPVLPAATTISA APPAIVDRRIDCIVPIRLGAPLAGERIVPAAQRLRRAGSKPVHIEGKPEGGSGWELLQNGVRYEELRAAAQLANRSGPLN ELEYSEFVSGVNQFADAIDGAPEFPDMLETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGT RFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVADEDILPFKLMCDYAKSLSDRIGAQVVDDSRRPLPES TLVAIEQQLMKLYAKLEEAGIPAGSPVTRRLFSQ
Sequences:
>Translated_434_residues MDELTLGLVGTGVVVIGGIWIYNMWQAAKVRRRMPRPMPADAADTLARHERDDDAPFIEPVRQPARRAAAPLEPVAPPAA AGAGDRDRRVEPTFGGAPAQPAPIDTPADLQADETLTAGATDPAERDAEAGEGAGPAEASAGAGEAVAEPVLPAATTISA APPAIVDRRIDCIVPIRLGAPLAGERIVPAAQRLRRAGSKPVHIEGKPEGGSGWELLQNGVRYEELRAAAQLANRSGPLN ELEYSEFVSGVNQFADAIDGAPEFPDMLETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGT RFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVADEDILPFKLMCDYAKSLSDRIGAQVVDDSRRPLPES TLVAIEQQLMKLYAKLEEAGIPAGSPVTRRLFSQ >Mature_434_residues MDELTLGLVGTGVVVIGGIWIYNMWQAAKVRRRMPRPMPADAADTLARHERDDDAPFIEPVRQPARRAAAPLEPVAPPAA AGAGDRDRRVEPTFGGAPAQPAPIDTPADLQADETLTAGATDPAERDAEAGEGAGPAEASAGAGEAVAEPVLPAATTISA APPAIVDRRIDCIVPIRLGAPLAGERIVPAAQRLRRAGSKPVHIEGKPEGGSGWELLQNGVRYEELRAAAQLANRSGPLN ELEYSEFVSGVNQFADAIDGAPEFPDMLETVSMARELDGFAAQCDAQLSINVMSDGAPWSANYVQAVASQDGLLLSRDGT RFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLDVPVADEDILPFKLMCDYAKSLSDRIGAQVVDDSRRPLPES TLVAIEQQLMKLYAKLEEAGIPAGSPVTRRLFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46219; Mature: 46219
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELTLGLVGTGVVVIGGIWIYNMWQAAKVRRRMPRPMPADAADTLARHERDDDAPFIEP CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH VRQPARRAAAPLEPVAPPAAAGAGDRDRRVEPTFGGAPAQPAPIDTPADLQADETLTAGA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC TDPAERDAEAGEGAGPAEASAGAGEAVAEPVLPAATTISAAPPAIVDRRIDCIVPIRLGA CCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCHHHHCCCCEEEEEEECC PLAGERIVPAAQRLRRAGSKPVHIEGKPEGGSGWELLQNGVRYEELRAAAQLANRSGPLN CCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCC ELEYSEFVSGVNQFADAIDGAPEFPDMLETVSMARELDGFAAQCDAQLSINVMSDGAPWS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCC ANYVQAVASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLD HHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEE VPVADEDILPFKLMCDYAKSLSDRIGAQVVDDSRRPLPESTLVAIEQQLMKLYAKLEEAG CCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC IPAGSPVTRRLFSQ CCCCCHHHHHHHCC >Mature Secondary Structure MDELTLGLVGTGVVVIGGIWIYNMWQAAKVRRRMPRPMPADAADTLARHERDDDAPFIEP CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH VRQPARRAAAPLEPVAPPAAAGAGDRDRRVEPTFGGAPAQPAPIDTPADLQADETLTAGA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC TDPAERDAEAGEGAGPAEASAGAGEAVAEPVLPAATTISAAPPAIVDRRIDCIVPIRLGA CCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCCHHHHCCCCEEEEEEECC PLAGERIVPAAQRLRRAGSKPVHIEGKPEGGSGWELLQNGVRYEELRAAAQLANRSGPLN CCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCC ELEYSEFVSGVNQFADAIDGAPEFPDMLETVSMARELDGFAAQCDAQLSINVMSDGAPWS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCC ANYVQAVASQDGLLLSRDGTRFVKLDAKQNPVFMLQFGDTNFLRDDLTYKGGNMITLVLD HHHHHHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHCCCEECCCCEEEEEEE VPVADEDILPFKLMCDYAKSLSDRIGAQVVDDSRRPLPESTLVAIEQQLMKLYAKLEEAG CCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC IPAGSPVTRRLFSQ CCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA