| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfcB [C]
Identifier: 238026889
GI number: 238026889
Start: 1376043
End: 1376969
Strand: Reverse
Name: yfcB [C]
Synonym: bglu_1g12570
Alternate gene names: 238026889
Gene position: 1376969-1376043 (Counterclockwise)
Preceding gene: 238026890
Following gene: 238026888
Centisome position: 35.25
GC content: 70.33
Gene sequence:
>927_bases ATGACGACCCCCACGCCCACCACGCCGTTCCAGACCGTCCGCGACCTGGTCCGCTATGCGGTGACGCGCTTCTCGGCCGC GCAGCTCGCGTTCGGCCACGGCTCGGACAACGCCTACGACGAAGCCGTCTATCTGGTGCTGCATACGCTGCACCTGCCGC TCGACACGCTCGAGCCGTTCCTCGACGCGCGCCTGCTGGCCGACGAGATCGACGCGGTATTGCAGCGCATCGAGCGCCGC GCCGGGGAGCGCCTGCCGGCTGCCTACTTGACCAACGAGGCGTGGATGCACGGCCACCGCTTCTACGTCGACGAGCGCGT GATCGTGCCGCGCTCGTTCATCGGCGAGTTGCTCGACGACGGCCTGCAGCCCTACGTGGCCGACCCCGAGCAGGTCGGTG CCGTGCTCGAGCTCTGCACCGGCTCGGGCTGCCTCGCGGTGCTCGCGGCCGAGGCGTTCCCGAACGCCGAGATCGACGCG GTCGACCTGTCCGAGGACGCTCTCGCCGTGGCCGAGATCAACGTGGCGGACTACCGGCTCGACCACCGCATCGCGCTGCA CCACGGCGACCTCTACGCGCCGCTGCCCGCCGAGCGGCTCGCCGATCCGGAGCTGCGCTACGACGTGATCCTGAGCAATC CGCCCTACGTGAACGCCGCCTCGATGGCCGCGCTGCCCGACGAGTACCGCCACGAGCCCGAGATGGCGCTGGCGGGCGGC GACGACGGCATGGACGTGGTGCGGCGGATCCTGCGCGAGGCGAAGAAGTGGCTGAAGGAAGACGGCGTGCTGGTGGTCGA GATCGGCAACGAGCGGCCGCACGTCGAGGCCGCGTTCGGCGGGCTCGACCTGATCTGGCTGCCGACCAGCGCCGGCGACG ACTGCGTGTTCCTGATCCACGCCGCCGATCTGCCGCATTCGGCATAA
Upstream 100 bases:
>100_bases ATCCACAAGATCGACGAGCACATCGAGCTGCGCTTCGTCGACCCGCTCAAGAACGTGTACCGCCGCGTGCTCGAACAACT GATCGCCTGACGGAGCCGCC
Downstream 100 bases:
>100_bases GGCGACGCGGGACGGCCGGCGCGGGACGGATGGCCCGCAACTCGCGCCGGACGGCGCGGTTCGATAAGATGCAGGACCGG CTGCCGCATCCCGCGGCGCG
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERR AGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDA VDLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA
Sequences:
>Translated_308_residues MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERR AGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDA VDLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA >Mature_307_residues TTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERRA GERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAV DLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGGD DGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=254, Percent_Identity=28.3464566929134, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI87082085, Length=295, Percent_Identity=47.7966101694915, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI1787463, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582226, Length=199, Percent_Identity=29.1457286432161, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 33891; Mature: 33759
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPF CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH LDARLLADEIDAVLQRIERRAGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCEEEECCEEECCHHHHHHHHHC GLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRL CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEHHHEEE DHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG CCEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECC DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIH CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCEEEEEE AADLPHSA ECCCCCCC >Mature Secondary Structure TTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPF CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH LDARLLADEIDAVLQRIERRAGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCEEEECCEEECCHHHHHHHHHC GLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRL CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEHHHEEE DHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG CCEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECC DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIH CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCEEEEEE AADLPHSA ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]