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The map label for this gene is ylbK [H]

Identifier: 238026864

GI number: 238026864

Start: 1344771

End: 1345688

Strand: Reverse

Name: ylbK [H]

Synonym: bglu_1g12320

Alternate gene names: 238026864

Gene position: 1345688-1344771 (Counterclockwise)

Preceding gene: 238026870

Following gene: 238026855

Centisome position: 34.45

GC content: 69.28

Gene sequence:

>918_bases
ATGTCGTCGTCCCCTCGCCTGTCCCGCCGCCACTTCTCGCTCGCCGCGATGTCCGCCTCGCTGGCCGCCTGCACGTCGTT
CGGCGGCAAGACCTCGCCGCCCGCGGCCACCGCCACGCGCCGGCCGCTGAAGATCGGCATCGCGCTCGGCGGCGGCGCCG
CGCGCGGCTTCGCGCACATCGGCGTGCTGAAGGCGCTCGAGGCGCGCAACGTCCAGATCGACCTCGTGGCCGGCACCAGC
GCCGGCTCGGTGGTGGGCGCGCTCTACGCCTCCGGCATGAACGCATTCGAGATCAACAAGCTCGCGCTGACCATGGATGA
AGCCTCGATCAGCGACTGGGCGCTGCCGTGGCGCTCGCGCGGGCTGCTGATGGGCGTGGCGCTGCAGAACTACATCAACA
AGACGCTGAACAACCGGCCGATCGAGAAAATGGCCAAGCCGCTCGGCATCGTCGCCACCGATCTGCAGAACGGCCAGCCG
ATCCTGTTCCAGCGCGGCAACACGGGCCTCGCCGTGCGAGCGTCGAGCAGCGTGCCGTCGGTGTTCGAGCCGGTGCGGAT
CGGCACGCGTGAATACGTGGACGGCGGCCTCGTGAGCCCGGTGCCGGCCTCGTTCGCGCGCAAGATGGGCGCCGATTTCG
TGATCGCCGTGGACATCTCGGCCCGCCCCGAGGGCGCACCGACGCAGAATCCGATCGAACTGCTGCTGCAGACCTTCACG
ATCATGGGCCAGACCATCAAGGCCTACGAACTCGACAAGTACGCCGACGTGGTGATCCGCCCGAATCTGGCCGAGATGAG
CGCAAGCGATTTCATGCAGCGCAACGCGGCGATCCTGGCCGGCGAGGAAGCGGCCGCGAAGCTCATGCCGGAGTTGCAGG
GCAAGCTGGCGGCCGCCGCGGCACGCGCCGCGGGCTGA

Upstream 100 bases:

>100_bases
TGCGCAGCGCGCGAGGCCGTGCCGGCCATCGAGCGCCGTGCCGCCTCGCCGTCGGTTGCACCCCATCCCGTGTGACGCTC
GCCTGCCGGAGAATTCGTCG

Downstream 100 bases:

>100_bases
GGCCCGCGCGAGCCGGGCCGTGAGGCGGCGGCGCCCCGCCGCCAAAGAAAAACCCCGGCCTCCTTGCGCAGGCCGGGGTG
GCTCGATCGATGGGCGCGCC

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSSSPRLSRRHFSLAAMSASLAACTSFGGKTSPPAATATRRPLKIGIALGGGAARGFAHIGVLKALEARNVQIDLVAGTS
AGSVVGALYASGMNAFEINKLALTMDEASISDWALPWRSRGLLMGVALQNYINKTLNNRPIEKMAKPLGIVATDLQNGQP
ILFQRGNTGLAVRASSSVPSVFEPVRIGTREYVDGGLVSPVPASFARKMGADFVIAVDISARPEGAPTQNPIELLLQTFT
IMGQTIKAYELDKYADVVIRPNLAEMSASDFMQRNAAILAGEEAAAKLMPELQGKLAAAAARAAG

Sequences:

>Translated_305_residues
MSSSPRLSRRHFSLAAMSASLAACTSFGGKTSPPAATATRRPLKIGIALGGGAARGFAHIGVLKALEARNVQIDLVAGTS
AGSVVGALYASGMNAFEINKLALTMDEASISDWALPWRSRGLLMGVALQNYINKTLNNRPIEKMAKPLGIVATDLQNGQP
ILFQRGNTGLAVRASSSVPSVFEPVRIGTREYVDGGLVSPVPASFARKMGADFVIAVDISARPEGAPTQNPIELLLQTFT
IMGQTIKAYELDKYADVVIRPNLAEMSASDFMQRNAAILAGEEAAAKLMPELQGKLAAAAARAAG
>Mature_304_residues
SSSPRLSRRHFSLAAMSASLAACTSFGGKTSPPAATATRRPLKIGIALGGGAARGFAHIGVLKALEARNVQIDLVAGTSA
GSVVGALYASGMNAFEINKLALTMDEASISDWALPWRSRGLLMGVALQNYINKTLNNRPIEKMAKPLGIVATDLQNGQPI
LFQRGNTGLAVRASSSVPSVFEPVRIGTREYVDGGLVSPVPASFARKMGADFVIAVDISARPEGAPTQNPIELLLQTFTI
MGQTIKAYELDKYADVVIRPNLAEMSASDFMQRNAAILAGEEAAAKLMPELQGKLAAAAARAAG

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=32.7586206896552, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI148727290, Length=188, Percent_Identity=33.5106382978723, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI148727335, Length=188, Percent_Identity=33.5106382978723, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI226510936, Length=294, Percent_Identity=34.0136054421769, Blast_Score=140, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI193204778, Length=196, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=189, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281376913, Length=188, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571388, Length=187, Percent_Identity=28.8770053475936, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31951; Mature: 31820

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01237 UPF0028

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSPRLSRRHFSLAAMSASLAACTSFGGKTSPPAATATRRPLKIGIALGGGAARGFAHI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GVLKALEARNVQIDLVAGTSAGSVVGALYASGMNAFEINKLALTMDEASISDWALPWRSR
HHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
GLLMGVALQNYINKTLNNRPIEKMAKPLGIVATDLQNGQPILFQRGNTGLAVRASSSVPS
CEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCC
VFEPVRIGTREYVDGGLVSPVPASFARKMGADFVIAVDISARPEGAPTQNPIELLLQTFT
HHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
IMGQTIKAYELDKYADVVIRPNLAEMSASDFMQRNAAILAGEEAAAKLMPELQGKLAAAA
HHCCHHHEEECCCCCCEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
ARAAG
HHCCC
>Mature Secondary Structure 
SSSPRLSRRHFSLAAMSASLAACTSFGGKTSPPAATATRRPLKIGIALGGGAARGFAHI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GVLKALEARNVQIDLVAGTSAGSVVGALYASGMNAFEINKLALTMDEASISDWALPWRSR
HHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
GLLMGVALQNYINKTLNNRPIEKMAKPLGIVATDLQNGQPILFQRGNTGLAVRASSSVPS
CEEEHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCC
VFEPVRIGTREYVDGGLVSPVPASFARKMGADFVIAVDISARPEGAPTQNPIELLLQTFT
HHHHHHCCCHHHCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
IMGQTIKAYELDKYADVVIRPNLAEMSASDFMQRNAAILAGEEAAAKLMPELQGKLAAAA
HHCCHHHEEECCCCCCEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
ARAAG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]