Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026855

Identifier: 238026855

GI number: 238026855

Start: 1332524

End: 1333552

Strand: Reverse

Name: 238026855

Synonym: bglu_1g12230

Alternate gene names: NA

Gene position: 1333552-1332524 (Counterclockwise)

Preceding gene: 238026864

Following gene: 238026849

Centisome position: 34.14

GC content: 66.86

Gene sequence:

>1029_bases
ATGTCCAGCATTGCATTTATCGAGGTGGAGGGCCGGTTCGCGATGCCATCGTCGCGTTCTTGCGCGCCGTCCTCCTATGG
CCACGAATGGGCGCTGCTGCCGCCGGCGCCGGAATCGCGCACGGGCATCCGTTCGCTCTATGCAGCGATCGTGCGCACCG
TCTGTCTCGACATCGACGCGTTTCTCGCCGCGTCCCGCTGGGATCGTGGCCGAGACGCCAAGGCGGTCTCGGCCACGATC
CCAGCGGCGGTGCACGCGCCCCCGGCGGCGGAAGCACCGCTTGAAACCAAGCTGCCGGAACCCAGGGGGCCAGCAGCCAA
TGCGTTCCCAGACGAAGCTCGCCCGATCAGCCTGCCCAAGACACCGCGATATCGCGCCGCGCGACGCTCGCCGCATTCGT
TGCGGCGACGCGCGGGCCAGATCGGCATCGTTGGGGCGGCCATGCTGCTCGGCTGGATCGTGATCGGCCATGTGCCGCCG
AAGCCGGAACGCAACGGTGCCGTCGATGTCTGGCAGGGTGCTGTCAATGGCTCAAGTTCCCGTCGAGCGGCGCCGGTTGC
GCTGCGGCAAGCAGGCGCGGACGTCGAACCATCGAGTGCCGATGCCATAGCGAGTCCGCGGCGCACACCGATCTCGAAGC
ATGCTGCCGCCGGCGCACCTACTCGCGATGAGTCGAAACGCAATCACGCGCAAGCCGGCACCGGGCTTGCGCGCGTCGAT
TCACGCCGCCTCGCGTCGTCACACGCCTTCGCCCCCCATCGTGAACCCGCTCGCCCCACGGCGTCTGTCGACCGCAGCAG
ACAGGCTCGCCGCGCTTCCCGCTCAGCGAGCCATCACGACGTCAATGCCCGACGCGGCCTGGTCGCCTCGGATGCTTTCG
ACATCAACGACTACGCTGATCTCGTCGACGAATTGCGGCAACGTAGCGCAATAGCGACGCGAAACGAGCAGCCGACCACC
GGCACCGAATGGGCCGATCAGATCTCACAGCGTCGCCTGACCGATATCCCCGAACAGTTTTCGCAATGA

Upstream 100 bases:

>100_bases
TGCGCGCCCGGGCCTGCGGAACGACTGGTCAGCGCTGCAGTCGGCCCGCGCCAGTGATGTCCACTGCCGCTCACGTTTAC
GCGGCGACCGCGAGGAATCC

Downstream 100 bases:

>100_bases
ACGAAGCGCATCGACGCAGCACGTGCCGATGATGCCAGGCGCCGACACGGAGCCGTACCGGATGGTAAACATCCAGCCGA
CGCCGGTTCGGCGTAACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATI
PAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPP
KPERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD
SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTT
GTEWADQISQRRLTDIPEQFSQ

Sequences:

>Translated_342_residues
MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATI
PAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPP
KPERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD
SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTT
GTEWADQISQRRLTDIPEQFSQ
>Mature_341_residues
SSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDAFLAASRWDRGRDAKAVSATIP
AAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPKTPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPK
PERNGAVDVWQGAVNGSSSRRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVDS
RRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYADLVDELRQRSAIATRNEQPTTG
TEWADQISQRRLTDIPEQFSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36776; Mature: 36645

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDA
CCCEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLAASRWDRGRDAKAVSATIPAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPK
HHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
TPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPKPERNGAVDVWQGAVNGSSS
CCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCC
RRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD
CCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH
SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYAD
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCHHHHH
LVDELRQRSAIATRNEQPTTGTEWADQISQRRLTDIPEQFSQ
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSIAFIEVEGRFAMPSSRSCAPSSYGHEWALLPPAPESRTGIRSLYAAIVRTVCLDIDA
CCEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLAASRWDRGRDAKAVSATIPAAVHAPPAAEAPLETKLPEPRGPAANAFPDEARPISLPK
HHHHHHCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
TPRYRAARRSPHSLRRRAGQIGIVGAAMLLGWIVIGHVPPKPERNGAVDVWQGAVNGSSS
CCCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCC
RRAAPVALRQAGADVEPSSADAIASPRRTPISKHAAAGAPTRDESKRNHAQAGTGLARVD
CCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHH
SRRLASSHAFAPHREPARPTASVDRSRQARRASRSASHHDVNARRGLVASDAFDINDYAD
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCHHHHH
LVDELRQRSAIATRNEQPTTGTEWADQISQRRLTDIPEQFSQ
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA