| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dam [C]
Identifier: 238026844
GI number: 238026844
Start: 1317612
End: 1317962
Strand: Direct
Name: dam [C]
Synonym: bglu_1g12070
Alternate gene names: 238026844
Gene position: 1317612-1317962 (Clockwise)
Preceding gene: 238026843
Following gene: 238026845
Centisome position: 33.73
GC content: 59.54
Gene sequence:
>351_bases ATGGCCCTTCCTATCATTCCGTGGATCGGCGGCAAGCGCCGCCTCGCGGAACATCTTCTCGCGCGCTTCCCCGCTCATGA GTGTTACGTCGAGGTGTTTGCGGGCGGCGCCGCGCTGTATTTCCTCAGGCCACCGGCAAAGGTGGAGGTGATCAACGACG TCAACGGCGAACTGATCAACCTGTATCGCGTCGTGCAGCACCACCTCGAGGAGTTCGTTCGGCAGTTCAAATGGGCGCTG ACGAGCCGGCAGGTGTTCGAGTGGCTGAAACAGACGGATCCGGCAACGCTCACGGACATTCAGCGTGCGGCCCGGTTTTA CTATCTGCAGAAAAGTGTAAGCGCTCTTTGA
Upstream 100 bases:
>100_bases GCCACCCATCACTGAGCGTGCCAGTGACAGGCCGAGGCCCTGCCACCTCCCGGGAGGCGGGCTGATTTTACCAATGCTCA GAAACAGAGGTTTGTCACAG
Downstream 100 bases:
>100_bases AGGACGCCATTGCACGACGAGGCTGATTCACCGAGGCTACGTGTCCATGTTCAATGAGCGTGGACAGGTGTGCATGAACG AGCAACACGGAGGTTTGCAG
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Methyltransferase; Site-Specific DNA-Methyltransferase; Methylase; Site-Specific DNA Methylase; Phage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; Methylase LlaDCHIA; Adenine Specific DNA Methyltransferase; Adenine-Specific DNA-Methyltransferase; Phage Associated Type II DNA-Methyltransferase; Ype IIs Methyltransferase M.AlwI; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; DNA Methyltransferase; DNA Adenine Methylase Subfamily; Phage-Related Methylase; Adenine-Specific Methyltransferase; Type IIs Methyltransferase; Phage DNA Methyltransferase
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MALPIIPWIGGKRRLAEHLLARFPAHECYVEVFAGGAALYFLRPPAKVEVINDVNGELINLYRVVQHHLEEFVRQFKWAL TSRQVFEWLKQTDPATLTDIQRAARFYYLQKSVSAL
Sequences:
>Translated_116_residues MALPIIPWIGGKRRLAEHLLARFPAHECYVEVFAGGAALYFLRPPAKVEVINDVNGELINLYRVVQHHLEEFVRQFKWAL TSRQVFEWLKQTDPATLTDIQRAARFYYLQKSVSAL >Mature_115_residues ALPIIPWIGGKRRLAEHLLARFPAHECYVEVFAGGAALYFLRPPAKVEVINDVNGELINLYRVVQHHLEEFVRQFKWALT SRQVFEWLKQTDPATLTDIQRAARFYYLQKSVSAL
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 13454; Mature: 13323
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPIIPWIGGKRRLAEHLLARFPAHECYVEVFAGGAALYFLRPPAKVEVINDVNGELIN CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHH LYRVVQHHLEEFVRQFKWALTSRQVFEWLKQTDPATLTDIQRAARFYYLQKSVSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALPIIPWIGGKRRLAEHLLARFPAHECYVEVFAGGAALYFLRPPAKVEVINDVNGELIN CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHH LYRVVQHHLEEFVRQFKWALTSRQVFEWLKQTDPATLTDIQRAARFYYLQKSVSAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA