| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026813
Identifier: 238026813
GI number: 238026813
Start: 1286509
End: 1287276
Strand: Reverse
Name: 238026813
Synonym: bglu_1g11720
Alternate gene names: NA
Gene position: 1287276-1286509 (Counterclockwise)
Preceding gene: 238026816
Following gene: 238026805
Centisome position: 32.95
GC content: 65.23
Gene sequence:
>768_bases ATGAAAACGATTCGTACCCTGGCGGTGATGGTTTCGGCCGTGGCAGTGCTCGCCGCTTGCGGCGGCGACGGCAACGACAT CGGCACCATTATTGGCGTGTCGAAGCCGCAGGCGCGCTTCATCCACGCCGTGCCGCTCGGCCCGAACGTCGATTACTACG TGAACGGGCAGCTCAACACGGCCAACATCGCCTACAAGGGCGTGACGCGCTACGGCGACGTGAGCAGCGGCGCCACCACC ACGTCCTACAACGCCACCGGCACCAACTCGGCGGTCGGTTCCCAGTCGTTCACCACCGCCAACGGCCACCACTACACCAC CATCGCGCTGCCGAGCAGCTCGTCGCCGATCGCGGTGATCGACGATCCGTATGCCAAGGGCCTGCTGTCGAACCAGGCGC GCCTGCGCAGCTTCAACGCCTCGCCGAACGCGCAGAACCTGGACATCTACGTGGTCACGGCCGGCAACACCAACATCTCG GCGGCCAACCCGACGCTGTCGAACGTGACCTACAAGAACGCGGTGCCGGCCACCACGCAGGATTCGATCTATCTGAACGG CGGCAACTACCAGATCATCGTCACGACCACCGGCTCGAAGACCCCGGTGCTGACGACGGCGCCGTTCAACCTGGCGAACA ACGCCGACTGGCTGGTGGTGACGATCCCGGCGGGCGGCATTGCCGACGTGATGCCGAACGACATCCACGTCCTGGTCGCG CAGGGCAACGAGGCCGATTCGTCGGCGCAGGAGCTCGGCCCGCAATAA
Upstream 100 bases:
>100_bases GCGTCGCCGGGCAGTCAACATCATTGGTCGCGAGACACCGGCGCCGCGAGGCGCGCGGATTGAGCAACATCATATGAACG AGAGTTCAGAGAGGAAAAAC
Downstream 100 bases:
>100_bases CCGGCAACCGCGACCGCCAAGCGCGGCCCACGATGAGGGCCGTCGCGGCGGCCGACGATGCACGACACCCCCGTGCGAGG CGGGGGTGTCGGTATGGCAG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKTIRTLAVMVSAVAVLAACGGDGNDIGTIIGVSKPQARFIHAVPLGPNVDYYVNGQLNTANIAYKGVTRYGDVSSGATT TSYNATGTNSAVGSQSFTTANGHHYTTIALPSSSSPIAVIDDPYAKGLLSNQARLRSFNASPNAQNLDIYVVTAGNTNIS AANPTLSNVTYKNAVPATTQDSIYLNGGNYQIIVTTTGSKTPVLTTAPFNLANNADWLVVTIPAGGIADVMPNDIHVLVA QGNEADSSAQELGPQ
Sequences:
>Translated_255_residues MKTIRTLAVMVSAVAVLAACGGDGNDIGTIIGVSKPQARFIHAVPLGPNVDYYVNGQLNTANIAYKGVTRYGDVSSGATT TSYNATGTNSAVGSQSFTTANGHHYTTIALPSSSSPIAVIDDPYAKGLLSNQARLRSFNASPNAQNLDIYVVTAGNTNIS AANPTLSNVTYKNAVPATTQDSIYLNGGNYQIIVTTTGSKTPVLTTAPFNLANNADWLVVTIPAGGIADVMPNDIHVLVA QGNEADSSAQELGPQ >Mature_255_residues MKTIRTLAVMVSAVAVLAACGGDGNDIGTIIGVSKPQARFIHAVPLGPNVDYYVNGQLNTANIAYKGVTRYGDVSSGATT TSYNATGTNSAVGSQSFTTANGHHYTTIALPSSSSPIAVIDDPYAKGLLSNQARLRSFNASPNAQNLDIYVVTAGNTNIS AANPTLSNVTYKNAVPATTQDSIYLNGGNYQIIVTTTGSKTPVLTTAPFNLANNADWLVVTIPAGGIADVMPNDIHVLVA QGNEADSSAQELGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26305; Mature: 26305
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIRTLAVMVSAVAVLAACGGDGNDIGTIIGVSKPQARFIHAVPLGPNVDYYVNGQLNT CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEECCEEEE ANIAYKGVTRYGDVSSGATTTSYNATGTNSAVGSQSFTTANGHHYTTIALPSSSSPIAVI CEEEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEE DDPYAKGLLSNQARLRSFNASPNAQNLDIYVVTAGNTNISAANPTLSNVTYKNAVPATTQ ECHHHHHHHCCCHHEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCEEECCCCCCCCC DSIYLNGGNYQIIVTTTGSKTPVLTTAPFNLANNADWLVVTIPAGGIADVMPNDIHVLVA CEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHCCCCCEEEEEE QGNEADSSAQELGPQ ECCCCCCHHHHCCCC >Mature Secondary Structure MKTIRTLAVMVSAVAVLAACGGDGNDIGTIIGVSKPQARFIHAVPLGPNVDYYVNGQLNT CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEECCEEEE ANIAYKGVTRYGDVSSGATTTSYNATGTNSAVGSQSFTTANGHHYTTIALPSSSSPIAVI CEEEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCEEEE DDPYAKGLLSNQARLRSFNASPNAQNLDIYVVTAGNTNISAANPTLSNVTYKNAVPATTQ ECHHHHHHHCCCHHEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCEEECCCCCCCCC DSIYLNGGNYQIIVTTTGSKTPVLTTAPFNLANNADWLVVTIPAGGIADVMPNDIHVLVA CEEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHCCCCCEEEEEE QGNEADSSAQELGPQ ECCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA