| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is resE [H]
Identifier: 238026816
GI number: 238026816
Start: 1289658
End: 1290761
Strand: Reverse
Name: resE [H]
Synonym: bglu_1g11750
Alternate gene names: 238026816
Gene position: 1290761-1289658 (Counterclockwise)
Preceding gene: 238026817
Following gene: 238026813
Centisome position: 33.04
GC content: 69.57
Gene sequence:
>1104_bases ATGACCCCAGTCAACATCCTGATCGTCGACGACATCGTCCACAACATCACCGCATTGCAGGCGCTGCTGGCGCGCCAAGA CGTCGAGCTGCTGGTGGCCAATTCGGGGACCGCCGCGCTCGACCTGCTGCTCAAGCACGAGGTGGCGCTCGCGATCCTCG ACGTCAACATGCCGGTGATGAACGGCTTCGAACTCGCCTCGCTGATGCGCGGCAGCCCGCGCACCTCGCACGTGCCGATC ATCTTCCTCACCGCCAGCGCCGAGGATGCCTCGCGCACCTTTCGCGGCTACGAGGCGGGCGCGGTGGACTTCCTCTACAA GCCCGTCGATCCGCTGATCCTGCGCTCGAAGGTGGACGTGTTCGTTCAGCTCGAACAGCACAAGCGCCTCGTCGCCGAGC AGTTGCAGACCACCCGGCAGCTGCTCGAAGCCAACGAGATGCTGATGGCGGTGCTCGGCCACGATCTGCGCACGCCGCTC GGCGCGGTGCTGGCCTCGGCCGAGTACCTGATGCGCGATCCGTCCGGCACGCAGACCGCGGCGGTGGCCGCGCGCATCAA GAGCAGCTCGCTGCGCATGGCGCGGATGGTGCATCAGCTGCTCAATCTCGCGCGGCTGCAGGGCGGCCGGCTGCGGCTTC AGACCCGGCAGCTGGAGCTGGCCACGCTGTGCCGCGCGGTGGTCGACGAATTCAGCGGCACCGCCGGCAGCGAGCGCATC GCCGTGGCCGCGCGCGGCGACACCCACGGCGAGTGGGATGCGGACCTGCTCTGGCAGGCGGTGTCGAACCTCGTCAGCAA CGCCCTGCATCACGGCGAGCCGAACGGCACCATCGTCGTCGAGATCGACGGCGAGGCGGCCCACCGGGTGTGCCTCAAGG TCAGCAACCACGGCGCGATCCCGCCGGCCGTGCTGCCCCACCTGTTCGAGGCCTTCGTGCCGGACGCGGCCACCACGCGG CCGCGCGGCGGCCTCGGGCTCGGCCTGCACATCGTGCAGAAGGTGGTCCAGATGCATCGCGGCTCGGTGCGCGCGCTGCC CGACAACGCCGAGCAGACCGTGTTCGCGGTGGAGCTGCCGCGCGTGGTGAAGAACGCCGCCTGA
Upstream 100 bases:
>100_bases CGCGCACGGCGATCGAACATCACGCCGCCGACCACGTGCTCTCTCCCGCCGAGATGGCCCGCCGGCTCGCGGCCTTGCCG GTTTTTTCCTGATTCATGCC
Downstream 100 bases:
>100_bases GCGCGCCCGGCTTCAGCGCGGGCCGCTCGCTCGGGCCCCGCGCGAGCCGGTGCCGCGCCGCTCCCGGCCGTGCAGGCGCT GCCATGAAAAAACCCTCGCG
Product: response regulator receiver sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTPVNILIVDDIVHNITALQALLARQDVELLVANSGTAALDLLLKHEVALAILDVNMPVMNGFELASLMRGSPRTSHVPI IFLTASAEDASRTFRGYEAGAVDFLYKPVDPLILRSKVDVFVQLEQHKRLVAEQLQTTRQLLEANEMLMAVLGHDLRTPL GAVLASAEYLMRDPSGTQTAAVAARIKSSSLRMARMVHQLLNLARLQGGRLRLQTRQLELATLCRAVVDEFSGTAGSERI AVAARGDTHGEWDADLLWQAVSNLVSNALHHGEPNGTIVVEIDGEAAHRVCLKVSNHGAIPPAVLPHLFEAFVPDAATTR PRGGLGLGLHIVQKVVQMHRGSVRALPDNAEQTVFAVELPRVVKNAA
Sequences:
>Translated_367_residues MTPVNILIVDDIVHNITALQALLARQDVELLVANSGTAALDLLLKHEVALAILDVNMPVMNGFELASLMRGSPRTSHVPI IFLTASAEDASRTFRGYEAGAVDFLYKPVDPLILRSKVDVFVQLEQHKRLVAEQLQTTRQLLEANEMLMAVLGHDLRTPL GAVLASAEYLMRDPSGTQTAAVAARIKSSSLRMARMVHQLLNLARLQGGRLRLQTRQLELATLCRAVVDEFSGTAGSERI AVAARGDTHGEWDADLLWQAVSNLVSNALHHGEPNGTIVVEIDGEAAHRVCLKVSNHGAIPPAVLPHLFEAFVPDAATTR PRGGLGLGLHIVQKVVQMHRGSVRALPDNAEQTVFAVELPRVVKNAA >Mature_366_residues TPVNILIVDDIVHNITALQALLARQDVELLVANSGTAALDLLLKHEVALAILDVNMPVMNGFELASLMRGSPRTSHVPII FLTASAEDASRTFRGYEAGAVDFLYKPVDPLILRSKVDVFVQLEQHKRLVAEQLQTTRQLLEANEMLMAVLGHDLRTPLG AVLASAEYLMRDPSGTQTAAVAARIKSSSLRMARMVHQLLNLARLQGGRLRLQTRQLELATLCRAVVDEFSGTAGSERIA VAARGDTHGEWDADLLWQAVSNLVSNALHHGEPNGTIVVEIDGEAAHRVCLKVSNHGAIPPAVLPHLFEAFVPDAATTRP RGGLGLGLHIVQKVVQMHRGSVRALPDNAEQTVFAVELPRVVKNAA
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=243, Percent_Identity=30.4526748971193, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=27.9835390946502, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790861, Length=222, Percent_Identity=29.2792792792793, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI145693157, Length=257, Percent_Identity=22.9571984435798, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789808, Length=206, Percent_Identity=29.6116504854369, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790436, Length=312, Percent_Identity=25, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=27.3542600896861, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 39735; Mature: 39603
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVNILIVDDIVHNITALQALLARQDVELLVANSGTAALDLLLKHEVALAILDVNMPVM CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHEEEEEECCCCCC NGFELASLMRGSPRTSHVPIIFLTASAEDASRTFRGYEAGAVDFLYKPVDPLILRSKVDV CCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHH FVQLEQHKRLVAEQLQTTRQLLEANEMLMAVLGHDLRTPLGAVLASAEYLMRDPSGTQTA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCHHH AVAARIKSSSLRMARMVHQLLNLARLQGGRLRLQTRQLELATLCRAVVDEFSGTAGSERI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE AVAARGDTHGEWDADLLWQAVSNLVSNALHHGEPNGTIVVEIDGEAAHRVCLKVSNHGAI EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEEEEEEECCCCCC PPAVLPHLFEAFVPDAATTRPRGGLGLGLHIVQKVVQMHRGSVRALPDNAEQTVFAVELP CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHH RVVKNAA HHHHCCC >Mature Secondary Structure TPVNILIVDDIVHNITALQALLARQDVELLVANSGTAALDLLLKHEVALAILDVNMPVM CCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHEEEEEECCCCCC NGFELASLMRGSPRTSHVPIIFLTASAEDASRTFRGYEAGAVDFLYKPVDPLILRSKVDV CCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHH FVQLEQHKRLVAEQLQTTRQLLEANEMLMAVLGHDLRTPLGAVLASAEYLMRDPSGTQTA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCHHH AVAARIKSSSLRMARMVHQLLNLARLQGGRLRLQTRQLELATLCRAVVDEFSGTAGSERI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE AVAARGDTHGEWDADLLWQAVSNLVSNALHHGEPNGTIVVEIDGEAAHRVCLKVSNHGAI EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHEEEEEEECCCCCC PPAVLPHLFEAFVPDAATTRPRGGLGLGLHIVQKVVQMHRGSVRALPDNAEQTVFAVELP CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHH RVVKNAA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]