| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is phoR [H]
Identifier: 238026793
GI number: 238026793
Start: 1262950
End: 1264260
Strand: Direct
Name: phoR [H]
Synonym: bglu_1g11510
Alternate gene names: 238026793
Gene position: 1262950-1264260 (Clockwise)
Preceding gene: 238026792
Following gene: 238026795
Centisome position: 32.33
GC content: 68.19
Gene sequence:
>1311_bases ATGAACATCATCTGGGTGCGCTTCCTGGTGTCGCTCGTGCTGCTCGCGCTGGCCGCGATACTGGCCGGCGTGACAATCGG CCTGCGCGCGGGCCTCACCGTCGGCGTCGTGCTGCTGGTCGCCCAGGCGTTCTTCACCACGTTTCACACGCAGCGCCTCT GGCGGCTGCTCGACGCGCCCGTCTACGGCGAGGTGCCGAGCGCGCCGGGCATCTGGGGCGAGATCTACTACCGGCTGCAC AAGCTCGCCAAGCAGTGGCACGCGCAGGTGCGCCAGGTCGAGCAGCAGCATTCACGCTTCATCCAGGCGATCCAGGCCTC GCCGAACGGCGTGGCGATGCTCGACGACCATGACCAGATCGAATGGTGCAATGCGATCGCCGAGCTGCATTTCGGGCTCG ACGCGAAGCGCGACCTGCGCCAGCACATCACGCATCTGGTCCGGCATCCCGACTTCGTGCGCTACCTGAACTCGCAGCAC TACGACGAGATGGTGGTGATGCGCGGCATGGGCGAGGGGCGCCAGCACGTGATCGCGGTGCAGGTGTTCCCCTACGGCGA CAACCGCAAGCTGCTGCTCACGCAGGACATCACCGAGGTCGAGCGCACCGACGCGATGCGGCGCGACTTCGTGGCCAACG TCTCGCACGAGCTGAAGACGCCGCTCACGGTGCTCTCCGGCTTCCTCGAGACGCTGCGCGAGCTGCCGCTGTCCGACGAC GAGCGCGCGCGCTACCTCGACATGATGGAGCAGCAGGCCTCGCGCATGCGCAAGATCGTCACCGACCTGCTGGTGCTCGC CAAGCTCGAAGGCGAGGGCAAGCCGCCCACCGACAAGCCGGTCGACATGGACGACGTGCTCGGCCACCTCGAGGACGTCG CGCAGACGCTGTCGGCCGGCCACCACGAGATCAGCTTCGAGATCGACGAGACGCTGACCGTGACGGGTGCCGAGACCGAG ATCTTCAGCGCGCTCGGCAACCTCGTGACGAATGCGGTGCGCTACACGCCCGAGGGCGGCAAGATCCGCGTGAGCTGGCG CCGCGACGGCGCGCAGGCCGTGTTCTCGGTCAAGGACAGCGGCTTCGGGATTCCGGCCGAGGACCTGCCGCGGCTCACCG AACGCTTCTACCGCGTCGATCGCAGCCGTTCGCGCGACACCGGCGGCACCGGCCTTGGCCTGGCGATCGTCAAGCACGTG CTGCAGCGCCACGACGGGCAGCTGCTGATCCAGAGCGAGGAAGGGCGCGGCAGCACGTTCACGGCGCGCTTTCCGGCGCA GCGCACGATCCGCCGGCAGCATGCGGCGTGA
Upstream 100 bases:
>100_bases CGGCAGCGGCTACCGCCTCGCCAAGCATGCCTGACCTGGCACGGCGCGCGTGCCGCGCGCCGTCTCTCACCGTTCTCCCG TCTTCTTTCTCGCGCCAGCC
Downstream 100 bases:
>100_bases GATGAGGCGCGTGAGACCGGCCGCGTGAGGCCGGCCAGACGAACAAGGCCGCCCGGTTCACCCCCGGGCGGCCTTTGCTT CGACGCGGCCGCGGCGGCGC
Product: phosphate regulon sensor protein PhoR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNIIWVRFLVSLVLLALAAILAGVTIGLRAGLTVGVVLLVAQAFFTTFHTQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKQWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAIAELHFGLDAKRDLRQHITHLVRHPDFVRYLNSQH YDEMVVMRGMGEGRQHVIAVQVFPYGDNRKLLLTQDITEVERTDAMRRDFVANVSHELKTPLTVLSGFLETLRELPLSDD ERARYLDMMEQQASRMRKIVTDLLVLAKLEGEGKPPTDKPVDMDDVLGHLEDVAQTLSAGHHEISFEIDETLTVTGAETE IFSALGNLVTNAVRYTPEGGKIRVSWRRDGAQAVFSVKDSGFGIPAEDLPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDGQLLIQSEEGRGSTFTARFPAQRTIRRQHAA
Sequences:
>Translated_436_residues MNIIWVRFLVSLVLLALAAILAGVTIGLRAGLTVGVVLLVAQAFFTTFHTQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKQWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAIAELHFGLDAKRDLRQHITHLVRHPDFVRYLNSQH YDEMVVMRGMGEGRQHVIAVQVFPYGDNRKLLLTQDITEVERTDAMRRDFVANVSHELKTPLTVLSGFLETLRELPLSDD ERARYLDMMEQQASRMRKIVTDLLVLAKLEGEGKPPTDKPVDMDDVLGHLEDVAQTLSAGHHEISFEIDETLTVTGAETE IFSALGNLVTNAVRYTPEGGKIRVSWRRDGAQAVFSVKDSGFGIPAEDLPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDGQLLIQSEEGRGSTFTARFPAQRTIRRQHAA >Mature_436_residues MNIIWVRFLVSLVLLALAAILAGVTIGLRAGLTVGVVLLVAQAFFTTFHTQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKQWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAIAELHFGLDAKRDLRQHITHLVRHPDFVRYLNSQH YDEMVVMRGMGEGRQHVIAVQVFPYGDNRKLLLTQDITEVERTDAMRRDFVANVSHELKTPLTVLSGFLETLRELPLSDD ERARYLDMMEQQASRMRKIVTDLLVLAKLEGEGKPPTDKPVDMDDVLGHLEDVAQTLSAGHHEISFEIDETLTVTGAETE IFSALGNLVTNAVRYTPEGGKIRVSWRRDGAQAVFSVKDSGFGIPAEDLPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDGQLLIQSEEGRGSTFTARFPAQRTIRRQHAA
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=360, Percent_Identity=40.2777777777778, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI145693157, Length=347, Percent_Identity=28.8184438040346, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI48994928, Length=363, Percent_Identity=29.7520661157025, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=30.1115241635688, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1786783, Length=231, Percent_Identity=33.7662337662338, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1790436, Length=305, Percent_Identity=26.5573770491803, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1789149, Length=333, Percent_Identity=28.8288288288288, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1790861, Length=208, Percent_Identity=33.6538461538462, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790346, Length=226, Percent_Identity=30.5309734513274, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1788549, Length=394, Percent_Identity=24.1116751269036, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788713, Length=270, Percent_Identity=27.4074074074074, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082128, Length=236, Percent_Identity=26.6949152542373, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87081816, Length=235, Percent_Identity=30.2127659574468, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1790551, Length=217, Percent_Identity=31.3364055299539, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=27.3127753303965, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789403, Length=211, Percent_Identity=30.3317535545024, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789808, Length=224, Percent_Identity=29.9107142857143, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787374, Length=244, Percent_Identity=27.4590163934426, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790300, Length=363, Percent_Identity=25.068870523416, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788279, Length=197, Percent_Identity=24.3654822335025, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49187; Mature: 49187
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIWVRFLVSLVLLALAAILAGVTIGLRAGLTVGVVLLVAQAFFTTFHTQRLWRLLDAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYGEVPSAPGIWGEIYYRLHKLAKQWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH EWCNAIAELHFGLDAKRDLRQHITHLVRHPDFVRYLNSQHYDEMVVMRGMGEGRQHVIAV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEE QVFPYGDNRKLLLTQDITEVERTDAMRRDFVANVSHELKTPLTVLSGFLETLRELPLSDD EEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC ERARYLDMMEQQASRMRKIVTDLLVLAKLEGEGKPPTDKPVDMDDVLGHLEDVAQTLSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC HHEISFEIDETLTVTGAETEIFSALGNLVTNAVRYTPEGGKIRVSWRRDGAQAVFSVKDS CCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEEECCC GFGIPAEDLPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLQRHDGQLLIQSEEGRGSTF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEE TARFPAQRTIRRQHAA EEECCHHHHHHHHCCC >Mature Secondary Structure MNIIWVRFLVSLVLLALAAILAGVTIGLRAGLTVGVVLLVAQAFFTTFHTQRLWRLLDAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYGEVPSAPGIWGEIYYRLHKLAKQWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH EWCNAIAELHFGLDAKRDLRQHITHLVRHPDFVRYLNSQHYDEMVVMRGMGEGRQHVIAV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEE QVFPYGDNRKLLLTQDITEVERTDAMRRDFVANVSHELKTPLTVLSGFLETLRELPLSDD EEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC ERARYLDMMEQQASRMRKIVTDLLVLAKLEGEGKPPTDKPVDMDDVLGHLEDVAQTLSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC HHEISFEIDETLTVTGAETEIFSALGNLVTNAVRYTPEGGKIRVSWRRDGAQAVFSVKDS CCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEEECCC GFGIPAEDLPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLQRHDGQLLIQSEEGRGSTF CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEE TARFPAQRTIRRQHAA EEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2556368 [H]