| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ppx [H]
Identifier: 238026795
GI number: 238026795
Start: 1266802
End: 1268316
Strand: Direct
Name: ppx [H]
Synonym: bglu_1g11530
Alternate gene names: 238026795
Gene position: 1266802-1268316 (Clockwise)
Preceding gene: 238026793
Following gene: 238026801
Centisome position: 32.43
GC content: 68.65
Gene sequence:
>1515_bases ATGGTTACTTCCCCGCAACTACTCGCCGCCGTCGATCTCGGCTCGAACAGCTTCAGGCTGATCGTCGGACGCGTCGAGGA AACTCCCGCGGGCAGCCAGATCTACCCGGTCGATGCATTGCGCGAGCCGGTGCGCCTCGCGGCGGGCCTGTCGCGAGACA AGATGCTCGATCGCGCGTCGCAGGAGCGCGGCTGGGAGGCGCTCAAGCGCTTCGGCGAGCGCCTGCGCGACTTCCATCCC GACCACGTGCGCGCGGTCGCCACCAACACGCTGCGCGTGGCCAAGAACGCCGGCGAATTCCTGGTCGAGGCGCAGGCCGC GCTCGGCTTTCCGATCGAGGTGATCGCCGGCCGCGAGGAAGCCCGGCTGATCTACGCGGGCGCGGCGCACTCGGTGCCGG CCAGTGCCGGCAAGCGGCTCGTGGTCGACATCGGCGGCGGTTCGACCGAGTTCATCATCGGCCAGCACTACACGCCGATC GTAATGGAAAGCCTCTACATCGGCTGCGTGAGCCACAGCCGCCAGTTCTTCCCGGCCGGCAACGTCGACGAATACACGAT GCGCCAGGCCGAACTCGCGGCCAAGCGCGAGATCCAGATCATTTCCGGCGAGTACAAGAAAGCGGGCTGGGACCAGGCGA TCGGCTCGTCGGGCACGGCGCGGGCGCTGGCCGAACTGGTCGAGGGCAACGGCTTCAACGACGCCGGCATCACGCACGGC ATCTCGCGCGGCGGCCTGGAGCGCCTGAAGCGCGCGCTGATCAAGGCCGAGAACGTGAATCGTCTCAAGCTCGTGGCGCT GAAGCCGGACCGCATTCCGGTGCTGGCGGGCGGCCTGTCGATCATGCTGGCCGTGTTCGAGGAGCTCGGCGTCGACTATG TCGACACCACCGACGGCGCGCTGCGCCTGGGCGTGCTGTACGACCTGCTCGGCCGCGCCCAGCACGAGGACATGCGCGCC GTGACGGTGGAGGGCTTCATGCGCCGCTACGGCGTGGACCGCCCGCAGGCCGACCGGATCGCCTCGCTCGCCACCCGCTT CTACGACCAGCTCGAATTCACCGACGAGGCGCACCGCGACGAGGATCGGACCTTCGTGGGCTGGGCCGCCGCGCTGCACG AGATCGGCCTGTCGATCTCGCACAGCGCCTATCACAAGCATTCGGCCTACATCACCAGCAACGCCGACATGCCCGGCTTC TCGCGCACCGACCAGGCGCGGCTCGCCGCGCTGGTGCTCGGCCACGCGGGCAAGCTCGGCAAGCTCTCGCAATCGCGCGA CGTGGAATGGCCGCTGCTGTTCTGCCTGCGGCTCGCGGCGCTGCTGTGCCGCCGGCGCACCGATGCCGGGCTGCCGGAAC TCACGGTGTCGCACGTGAAGAAGGGCGGCTACGAAGTCCGGCTGCCGAGCAGCTGGGTCGAGCAGAACCCGCTGACCGAC TACAGCCTGAGCCAGGAGGCGGCCGAGTGGGAGAAGGTCGGGATTCCGTATCGCGTCATCTATACCGAGGCCTGA
Upstream 100 bases:
>100_bases CACCGCGGCGGCGACAGCGCTTAAAATGTTGCGTTTGAATGAGATGGGTCGGCACAGCGGCGGCTCGCCGGCTCGAAGAG ACACGGAGCCCTTACCCGAT
Downstream 100 bases:
>100_bases GCCGCCGCGCGCGCCTGCCGGTTCGCTCGCACGCGCCGGGGGCGGCCGCGGGCCCGGGCCGCGGCGGCATCACGGGGTGC AGACGATCGCCGTGAGGAAC
Product: Exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MVTSPQLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLVEAQAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPI VMESLYIGCVSHSRQFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEGNGFNDAGITHG ISRGGLERLKRALIKAENVNRLKLVALKPDRIPVLAGGLSIMLAVFEELGVDYVDTTDGALRLGVLYDLLGRAQHEDMRA VTVEGFMRRYGVDRPQADRIASLATRFYDQLEFTDEAHRDEDRTFVGWAAALHEIGLSISHSAYHKHSAYITSNADMPGF SRTDQARLAALVLGHAGKLGKLSQSRDVEWPLLFCLRLAALLCRRRTDAGLPELTVSHVKKGGYEVRLPSSWVEQNPLTD YSLSQEAAEWEKVGIPYRVIYTEA
Sequences:
>Translated_504_residues MVTSPQLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLVEAQAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPI VMESLYIGCVSHSRQFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEGNGFNDAGITHG ISRGGLERLKRALIKAENVNRLKLVALKPDRIPVLAGGLSIMLAVFEELGVDYVDTTDGALRLGVLYDLLGRAQHEDMRA VTVEGFMRRYGVDRPQADRIASLATRFYDQLEFTDEAHRDEDRTFVGWAAALHEIGLSISHSAYHKHSAYITSNADMPGF SRTDQARLAALVLGHAGKLGKLSQSRDVEWPLLFCLRLAALLCRRRTDAGLPELTVSHVKKGGYEVRLPSSWVEQNPLTD YSLSQEAAEWEKVGIPYRVIYTEA >Mature_504_residues MVTSPQLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLVEAQAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPI VMESLYIGCVSHSRQFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEGNGFNDAGITHG ISRGGLERLKRALIKAENVNRLKLVALKPDRIPVLAGGLSIMLAVFEELGVDYVDTTDGALRLGVLYDLLGRAQHEDMRA VTVEGFMRRYGVDRPQADRIASLATRFYDQLEFTDEAHRDEDRTFVGWAAALHEIGLSISHSAYHKHSAYITSNADMPGF SRTDQARLAALVLGHAGKLGKLSQSRDVEWPLLFCLRLAALLCRRRTDAGLPELTVSHVKKGGYEVRLPSSWVEQNPLTD YSLSQEAAEWEKVGIPYRVIYTEA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=497, Percent_Identity=38.0281690140845, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI48994966, Length=498, Percent_Identity=37.5502008032129, Blast_Score=309, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 55362; Mature: 55362
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSPQLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRAS CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH QERGWEALKRFGERLRDFHPDHVRAVATNTLRVAKNAGEFLVEAQAALGFPIEVIAGREE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCEEEECCCCC ARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPIVMESLYIGCVSHSRQFFPAG CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC NVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEGNGFNDAGITHG CCCHHHHHHHHHHHHHCEEEECCCCHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHCC ISRGGLERLKRALIKAENVNRLKLVALKPDRIPVLAGGLSIMLAVFEELGVDYVDTTDGA CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCEEECCCCH LRLGVLYDLLGRAQHEDMRAVTVEGFMRRYGVDRPQADRIASLATRFYDQLEFTDEAHRD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHCCC EDRTFVGWAAALHEIGLSISHSAYHKHSAYITSNADMPGFSRTDQARLAALVLGHAGKLG CCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC KLSQSRDVEWPLLFCLRLAALLCRRRTDAGLPELTVSHVKKGGYEVRLPSSWVEQNPLTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHCCCCCC YSLSQEAAEWEKVGIPYRVIYTEA CCCCHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MVTSPQLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRAS CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH QERGWEALKRFGERLRDFHPDHVRAVATNTLRVAKNAGEFLVEAQAALGFPIEVIAGREE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCEEEECCCCC ARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPIVMESLYIGCVSHSRQFFPAG CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC NVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEGNGFNDAGITHG CCCHHHHHHHHHHHHHCEEEECCCCHHCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHCC ISRGGLERLKRALIKAENVNRLKLVALKPDRIPVLAGGLSIMLAVFEELGVDYVDTTDGA CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCEEECCCCH LRLGVLYDLLGRAQHEDMRAVTVEGFMRRYGVDRPQADRIASLATRFYDQLEFTDEAHRD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHCCC EDRTFVGWAAALHEIGLSISHSAYHKHSAYITSNADMPGFSRTDQARLAALVLGHAGKLG CCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC KLSQSRDVEWPLLFCLRLAALLCRRRTDAGLPELTVSHVKKGGYEVRLPSSWVEQNPLTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCHHHHHCCCCCC YSLSQEAAEWEKVGIPYRVIYTEA CCCCHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]