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The map label for this gene is ynfA [C]

Identifier: 238026770

GI number: 238026770

Start: 1237716

End: 1238048

Strand: Direct

Name: ynfA [C]

Synonym: bglu_1g11280

Alternate gene names: 238026770

Gene position: 1237716-1238048 (Clockwise)

Preceding gene: 238026768

Following gene: 238026774

Centisome position: 31.68

GC content: 72.07

Gene sequence:

>333_bases
ATGCCCCAACTGATCAAGATCGCCGGATTGTTCGTGCTGACCGCCCTGGCCGAAATCGTCGGCTGCTATCTGCCCTGGCT
GGTGCTCAAGGGTGGGCGCGGCGCCTGGCTGCTGGTGCCGGCCGCCGTCTCGCTCGCGCTGTTCGCGTGGCTGCTGACGC
TGCAGCCGAGCGCGGCCGGCCGCACCTATGCGGCCTACGGCGGCGTCTATATCGCGGTGGCGCTGGTCTGGCTGCGCGTG
GTGGACGGGATCGCGCTGTCGCGCTGGGATTGGGCCGGCGCGGCGCTGGCGCTGGCCGGGATGGCCGTGATCGCGCTGCA
GCCGCGCGGCTGA

Upstream 100 bases:

>100_bases
TTCCTGCCCGGGGGCGGCGCCGGCCCGGCGCCCGGCTCCCATTCGCCGGCCGCCGCGATGGCGCCCGGCCCGAATTCACG
ATTGCCGCATTGCGCCCCCC

Downstream 100 bases:

>100_bases
GCGCGGGGCAGCGAACCAGGAGCCGGCGCGGCCGCGGGGCGGGCCGCGCCGGCGAGGATGCCGCCCGCTCAGGCGGGCGG
CGCCGCCTCCTGGCGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPQLIKIAGLFVLTALAEIVGCYLPWLVLKGGRGAWLLVPAAVSLALFAWLLTLQPSAAGRTYAAYGGVYIAVALVWLRV
VDGIALSRWDWAGAALALAGMAVIALQPRG

Sequences:

>Translated_110_residues
MPQLIKIAGLFVLTALAEIVGCYLPWLVLKGGRGAWLLVPAAVSLALFAWLLTLQPSAAGRTYAAYGGVYIAVALVWLRV
VDGIALSRWDWAGAALALAGMAVIALQPRG
>Mature_109_residues
PQLIKIAGLFVLTALAEIVGCYLPWLVLKGGRGAWLLVPAAVSLALFAWLLTLQPSAAGRTYAAYGGVYIAVALVWLRVV
DGIALSRWDWAGAALALAGMAVIALQPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=62.3762376237624, Blast_Score=127, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11560; Mature: 11429

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLIKIAGLFVLTALAEIVGCYLPWLVLKGGRGAWLLVPAAVSLALFAWLLTLQPSAAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCC
RTYAAYGGVYIAVALVWLRVVDGIALSRWDWAGAALALAGMAVIALQPRG
CCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure 
PQLIKIAGLFVLTALAEIVGCYLPWLVLKGGRGAWLLVPAAVSLALFAWLLTLQPSAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCC
RTYAAYGGVYIAVALVWLRVVDGIALSRWDWAGAALALAGMAVIALQPRG
CCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA