| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mdcB [H]
Identifier: 238026763
GI number: 238026763
Start: 1230636
End: 1231631
Strand: Direct
Name: mdcB [H]
Synonym: bglu_1g11210
Alternate gene names: 238026763
Gene position: 1230636-1231631 (Clockwise)
Preceding gene: 238026762
Following gene: 238026764
Centisome position: 31.5
GC content: 77.41
Gene sequence:
>996_bases ATGACGCCGGGGCTGCGGGCGGCATGGCCGCGGGCCGCGGCGCCGGCCTCGCCCGAAGCGATCGCCGAGCTTGGCGCGGC CTGCCTGCGCCTCGAGGTCGAAACCTGGCCGAAGCCGGGGCTGGTCAGCGAGGTGGACAGCGGCAGTCACGACGACATGG ATGCCGGCACCTTCGCACGCAGCGCGGCCGCGATCCGGCCGTATCTGGCCGAACTCGCGGCGGCCGGCGCCGCGCGCGCG CAGATGGCCGTGCTGCGGCGCATCGGCCTGCGCGCCGAGCACGCGATGCTCGCGGCGACGGGCGGCGTGAATACGCATCG CGGCGCGATCTTCGGGCTCGGCCTGCTGTGCGCGGCAGCCGGCCTGCGCGCCGCGATGGGGGCGGACCGATTCGCCTCGG GGAGGCCGGCCGTGAGCGGGCCGGCCTCGAAGGCGCCGGTTTCGGGCGTGTCGGCCGTCTGCTCGTCGGTTGCGGAGGGC TTGGCTCGGGGCAGGTCCGCTGCGAGCGCATCCGCACCCGGCGCGGCCGCGACCCTCGGCGAGATCGTCGCGCGACAGTG GGGGGCCGACATCCTCGTCGGGCCGCGCGCCTCGGATAGCCACGGCGAGATCGCGGGGCGCCGCCACGGCGTCGGTGGCG CGCGTCAGGAGGCCGCGAGTGGCTTCCCGAGCGTCTACCGGATCGGAGTGCCGGCCCTGCGCGAGGCGCAGGCGCTGCGT CCCGGCGATGCGTCCGCCGCGCGCGTGCAGGCCTGCTTTGCGCTGATCGCGGCCGTCGGCGACACCAACCTGCTGCATCG CGGCGGCGCCGGCGGCCTCGCGTTCGCGCAGCGCCGCGCGCGCGATTTCCTCGCGCGTGGCGGCATCGGCGCGCCGGACT GGCTCGCGCGTGCCGAGGCCGTCCACCGGGCGTTCGTCGCGCGCCGGCTGAGCCCGGGCGGCGCGGCCGACCTGCTCGCG ATGAGCCTGTTCGCGGCCGCCAGCGAGGCGCCATGA
Upstream 100 bases:
>100_bases GCGAATGGCATGCCGCGCGCGGCGCGCATGACGAGATCGTCGTGAAGACGGCGGCCGGGGTGGCGCTGATGACGCCGCGC GCGTTCCTGGAGGGCGCCGT
Downstream 100 bases:
>100_bases CGATCGCGCTGCTGTGCTCCGGGCAAGGACAGCAAGGGCCCGACATGTTCGACCTGATCGGCGAGGGCGGCATGCCGGCC TCGCTCGAGCCGCTGTTCGC
Product: Triphosphoribosyl-dephospho-CoA synthase
Products: NA
Alternate protein names: 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTPGLRAAWPRAAAPASPEAIAELGAACLRLEVETWPKPGLVSEVDSGSHDDMDAGTFARSAAAIRPYLAELAAAGAARA QMAVLRRIGLRAEHAMLAATGGVNTHRGAIFGLGLLCAAAGLRAAMGADRFASGRPAVSGPASKAPVSGVSAVCSSVAEG LARGRSAASASAPGAAATLGEIVARQWGADILVGPRASDSHGEIAGRRHGVGGARQEAASGFPSVYRIGVPALREAQALR PGDASAARVQACFALIAAVGDTNLLHRGGAGGLAFAQRRARDFLARGGIGAPDWLARAEAVHRAFVARRLSPGGAADLLA MSLFAAASEAP
Sequences:
>Translated_331_residues MTPGLRAAWPRAAAPASPEAIAELGAACLRLEVETWPKPGLVSEVDSGSHDDMDAGTFARSAAAIRPYLAELAAAGAARA QMAVLRRIGLRAEHAMLAATGGVNTHRGAIFGLGLLCAAAGLRAAMGADRFASGRPAVSGPASKAPVSGVSAVCSSVAEG LARGRSAASASAPGAAATLGEIVARQWGADILVGPRASDSHGEIAGRRHGVGGARQEAASGFPSVYRIGVPALREAQALR PGDASAARVQACFALIAAVGDTNLLHRGGAGGLAFAQRRARDFLARGGIGAPDWLARAEAVHRAFVARRLSPGGAADLLA MSLFAAASEAP >Mature_330_residues TPGLRAAWPRAAAPASPEAIAELGAACLRLEVETWPKPGLVSEVDSGSHDDMDAGTFARSAAAIRPYLAELAAAGAARAQ MAVLRRIGLRAEHAMLAATGGVNTHRGAIFGLGLLCAAAGLRAAMGADRFASGRPAVSGPASKAPVSGVSAVCSSVAEGL ARGRSAASASAPGAAATLGEIVARQWGADILVGPRASDSHGEIAGRRHGVGGARQEAASGFPSVYRIGVPALREAQALRP GDASAARVQACFALIAAVGDTNLLHRGGAGGLAFAQRRARDFLARGGIGAPDWLARAEAVHRAFVARRLSPGGAADLLAM SLFAAASEAP
Specific function: Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase [H]
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitG/MdcB family [H]
Homologues:
Organism=Escherichia coli, GI1786830, Length=315, Percent_Identity=34.9206349206349, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 - InterPro: IPR017555 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: =2.7.8.25 [H]
Molecular weight: Translated: 33164; Mature: 33033
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGLRAAWPRAAAPASPEAIAELGAACLRLEVETWPKPGLVSEVDSGSHDDMDAGTFAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHCCCCCCCHHHCCCCCCCCCCHHHHHH SAAAIRPYLAELAAAGAARAQMAVLRRIGLRAEHAMLAATGGVNTHRGAIFGLGLLCAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHH GLRAAMGADRFASGRPAVSGPASKAPVSGVSAVCSSVAEGLARGRSAASASAPGAAATLG HHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EIVARQWGADILVGPRASDSHGEIAGRRHGVGGARQEAASGFPSVYRIGVPALREAQALR HHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHHHCC PGDASAARVQACFALIAAVGDTNLLHRGGAGGLAFAQRRARDFLARGGIGAPDWLARAEA CCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VHRAFVARRLSPGGAADLLAMSLFAAASEAP HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPGLRAAWPRAAAPASPEAIAELGAACLRLEVETWPKPGLVSEVDSGSHDDMDAGTFAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHCCCCCCCHHHCCCCCCCCCCHHHHHH SAAAIRPYLAELAAAGAARAQMAVLRRIGLRAEHAMLAATGGVNTHRGAIFGLGLLCAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHH GLRAAMGADRFASGRPAVSGPASKAPVSGVSAVCSSVAEGLARGRSAASASAPGAAATLG HHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH EIVARQWGADILVGPRASDSHGEIAGRRHGVGGARQEAASGFPSVYRIGVPALREAQALR HHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHHHCC PGDASAARVQACFALIAAVGDTNLLHRGGAGGLAFAQRRARDFLARGGIGAPDWLARAEA CCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VHRAFVARRLSPGGAADLLAMSLFAAASEAP HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10561613 [H]