Click here to switch to the map view.

The map label for this gene is fabD [H]

Identifier: 238026764

GI number: 238026764

Start: 1231628

End: 1232569

Strand: Direct

Name: fabD [H]

Synonym: bglu_1g11220

Alternate gene names: 238026764

Gene position: 1231628-1232569 (Clockwise)

Preceding gene: 238026763

Following gene: 238026765

Centisome position: 31.53

GC content: 76.22

Gene sequence:

>942_bases
ATGACGATCGCGCTGCTGTGCTCCGGGCAAGGACAGCAAGGGCCCGACATGTTCGACCTGATCGGCGAGGGCGGCATGCC
GGCCTCGCTCGAGCCGCTGTTCGCGCAGGCGGCAGGCTGGTTCGGCGCCGATCCGCGCGACTGGGTACGCACGGCGGGCG
ACGATGCGTTGCGCGGCAACGGCGCGGCGCAGCGGCTTTGCACGCTGCACGCGCTGGCGGCCCATGCGCGGCTCGCGCCG
CTGCTGCCCGGGCGGCGCTGCGTGGCCGGCTACAGCGTCGGGGAGATCGCCGCTTGGCATGTGGCCGGGCGGATCGGCGC
AAGCGACACGCTCGACCTGATCGGCGCGCGTGCCGACGCGATGGACGCGGCCAGCACCGGCGACGAGGGCATGCTGTTCG
TGCGCGGGCTGCGACGCGCCGCCGTCGAGGCGCTTTGCGCCGGTTGCGATGCCGCGATCGCGATCGTCAATCCCGGTGAT
GCCTGGGTCCTGGCCGGCGCGGCCGACGCGCTGGCCGCACTGGCCGACGCGGCCCGCGCGCAGGGCGCCGCCCGCGTCGT
GCCGGTGCCGGTGCGGATCGCCTCGCATACGCGCCGGCTGGCCTCGGCGGTGCCGGTGTTCCGCGCCGCGCTCGGCGCCG
TGAGGCTCGGCCGCGGCGCGGCGGGCACGCGGCTCGTCAGCGGCATCGACGGCGCCGTCGTGATCGATCACGGCAGCGGC
CTCGACAAGCTCGCGCGGCAGATCGCCGAGCCCGTCGAGTGGGCAGCCTGCCTCACCGCCTGCGTGGAGGCCGGCGCGAG
CGCCTTCGTCGAGCTCGGGCCGGGGCGCGCGCTGGCCGAGATGGCGGCCGGCACCTATCCGGCGATTCCGGCGCGCAGCC
TCGCCGATTTCCGTTCGTGGGACGGCGTGCGGGCCTGGCTGGCGCGAGTGGCCGGCGGCTGA

Upstream 100 bases:

>100_bases
CCGAGGCCGTCCACCGGGCGTTCGTCGCGCGCCGGCTGAGCCCGGGCGGCGCGGCCGACCTGCTCGCGATGAGCCTGTTC
GCGGCCGCCAGCGAGGCGCC

Downstream 100 bases:

>100_bases
TCGGGCGCGCCGCGAGCGGGCGGCGCCACGCGTCGCCGCCCGCTTGTCGAGCGGCGCACGCGCGGGCGTCGTCGCGGCGC
CACGCTCGGCGCAAACCGCT

Product: acyl transferase domain-containing protein

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTIALLCSGQGQQGPDMFDLIGEGGMPASLEPLFAQAAGWFGADPRDWVRTAGDDALRGNGAAQRLCTLHALAAHARLAP
LLPGRRCVAGYSVGEIAAWHVAGRIGASDTLDLIGARADAMDAASTGDEGMLFVRGLRRAAVEALCAGCDAAIAIVNPGD
AWVLAGAADALAALADAARAQGAARVVPVPVRIASHTRRLASAVPVFRAALGAVRLGRGAAGTRLVSGIDGAVVIDHGSG
LDKLARQIAEPVEWAACLTACVEAGASAFVELGPGRALAEMAAGTYPAIPARSLADFRSWDGVRAWLARVAGG

Sequences:

>Translated_313_residues
MTIALLCSGQGQQGPDMFDLIGEGGMPASLEPLFAQAAGWFGADPRDWVRTAGDDALRGNGAAQRLCTLHALAAHARLAP
LLPGRRCVAGYSVGEIAAWHVAGRIGASDTLDLIGARADAMDAASTGDEGMLFVRGLRRAAVEALCAGCDAAIAIVNPGD
AWVLAGAADALAALADAARAQGAARVVPVPVRIASHTRRLASAVPVFRAALGAVRLGRGAAGTRLVSGIDGAVVIDHGSG
LDKLARQIAEPVEWAACLTACVEAGASAFVELGPGRALAEMAAGTYPAIPARSLADFRSWDGVRAWLARVAGG
>Mature_312_residues
TIALLCSGQGQQGPDMFDLIGEGGMPASLEPLFAQAAGWFGADPRDWVRTAGDDALRGNGAAQRLCTLHALAAHARLAPL
LPGRRCVAGYSVGEIAAWHVAGRIGASDTLDLIGARADAMDAASTGDEGMLFVRGLRRAAVEALCAGCDAAIAIVNPGDA
WVLAGAADALAALADAARAQGAARVVPVPVRIASHTRRLASAVPVFRAALGAVRLGRGAAGTRLVSGIDGAVVIDHGSGL
DKLARQIAEPVEWAACLTACVEAGASAFVELGPGRALAEMAAGTYPAIPARSLADFRSWDGVRAWLARVAGG

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

None

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 31740; Mature: 31608

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIALLCSGQGQQGPDMFDLIGEGGMPASLEPLFAQAAGWFGADPRDWVRTAGDDALRGN
CEEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHCCC
GAAQRLCTLHALAAHARLAPLLPGRRCVAGYSVGEIAAWHVAGRIGASDTLDLIGARADA
HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHH
MDAASTGDEGMLFVRGLRRAAVEALCAGCDAAIAIVNPGDAWVLAGAADALAALADAARA
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHH
QGAARVVPVPVRIASHTRRLASAVPVFRAALGAVRLGRGAAGTRLVSGIDGAVVIDHGSG
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCC
LDKLARQIAEPVEWAACLTACVEAGASAFVELGPGRALAEMAAGTYPAIPARSLADFRSW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHCCCCCCCCCHHHHHHHCC
DGVRAWLARVAGG
HHHHHHHHHHCCC
>Mature Secondary Structure 
TIALLCSGQGQQGPDMFDLIGEGGMPASLEPLFAQAAGWFGADPRDWVRTAGDDALRGN
EEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHCCC
GAAQRLCTLHALAAHARLAPLLPGRRCVAGYSVGEIAAWHVAGRIGASDTLDLIGARADA
HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHH
MDAASTGDEGMLFVRGLRRAAVEALCAGCDAAIAIVNPGDAWVLAGAADALAALADAARA
HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHH
QGAARVVPVPVRIASHTRRLASAVPVFRAALGAVRLGRGAAGTRLVSGIDGAVVIDHGSG
CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCC
LDKLARQIAEPVEWAACLTACVEAGASAFVELGPGRALAEMAAGTYPAIPARSLADFRSW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHCCCCCCCCCHHHHHHHCC
DGVRAWLARVAGG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]