| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026761
Identifier: 238026761
GI number: 238026761
Start: 1229220
End: 1229936
Strand: Direct
Name: 238026761
Synonym: bglu_1g11190
Alternate gene names: NA
Gene position: 1229220-1229936 (Clockwise)
Preceding gene: 238026760
Following gene: 238026762
Centisome position: 31.47
GC content: 75.03
Gene sequence:
>717_bases ATGACGCTCGACGACATTCTCGCGTCGTTCGACCACGACGTGTCCCGCCGCGACGACGGCCTGCTGGCCGGCCGCGCCAC GCTCGACGGCCGGCGCGTGGACCTGATCGGCGTGTCGGGCCGCGCGTTCGTTGGCGTCGACGAGGCGCTGTGGCTGTCGG CGCGCGTGCTCGAGACGGTGCGGCGCGGCGGCGGCACGCCGATCCTCGTGCTGCTCGACAGCGGCAGCCAGCGCATGAGC AAGCGCGACGAGCTGCTCGGCCTCAACGAATGCCTGTCGCATCTGGCCAAGACCCTGATGCTCGCGAGCGGCCGCGGCCA CGCCACCGTCGGGCTGCTGTACGGCGGCACGGCGGCCGGCGCGTTCATCGCGACCGCGCTCGCGACCCGAGTGCTGCTCG CGCTGCCGGGCGCGGAGCCGGCCGTGATGGACCTGCCGTCGATGGCGCGCGTGACCAAGCTGCCGCTCGAGGTGCTGGAA GAGAAGGCCAAATCGACGGCGGTGTTCGCGCCGGGACTCGCCAACCTCGAACAGACGGGCGCCGTCGACGCGGTGCTCGA TCCCGGGCAAGCGCTCGCGGCGCAGCTCGCGCGCTGGCTCGCCGAACCAGCCGCGCGCGCCGACGGCCGCGACCGGCTCG GCGAGGCGCGCGGCGGTCGCCCGGCGGCGGCGCGCATCGCGCAACGGGTTCATGCGCTCGCCCGCGCGGCCGGCTGA
Upstream 100 bases:
>100_bases GGCGCCGGCTCGGCGCGACCGAAGCCGAGGCCGAGGCGATTCCCGCGATGCCCGGCGAGACCTTCGCCGCGCTCGCCGAG CGCCTTCAGGGAGGCGCGCG
Downstream 100 bases:
>100_bases GGCCGCGCTGGTTCGCCACCGCGTCGTGCGCCTCGCGCCCGCCGCGTGGGCGGCACTCGCCGAGCCACTCGTCGAGCGGC TGGCATTGCCGGCCGCCGAC
Product: malonate decarboxylase subunit gamma
Products: NA
Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Subunit MdcE; Malonate Decarboxylase Gamma-Subunit; Malonate Decarboxylase Gamma-Subunit MdcE
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTLDDILASFDHDVSRRDDGLLAGRATLDGRRVDLIGVSGRAFVGVDEALWLSARVLETVRRGGGTPILVLLDSGSQRMS KRDELLGLNECLSHLAKTLMLASGRGHATVGLLYGGTAAGAFIATALATRVLLALPGAEPAVMDLPSMARVTKLPLEVLE EKAKSTAVFAPGLANLEQTGAVDAVLDPGQALAAQLARWLAEPAARADGRDRLGEARGGRPAAARIAQRVHALARAAG
Sequences:
>Translated_238_residues MTLDDILASFDHDVSRRDDGLLAGRATLDGRRVDLIGVSGRAFVGVDEALWLSARVLETVRRGGGTPILVLLDSGSQRMS KRDELLGLNECLSHLAKTLMLASGRGHATVGLLYGGTAAGAFIATALATRVLLALPGAEPAVMDLPSMARVTKLPLEVLE EKAKSTAVFAPGLANLEQTGAVDAVLDPGQALAAQLARWLAEPAARADGRDRLGEARGGRPAAARIAQRVHALARAAG >Mature_237_residues TLDDILASFDHDVSRRDDGLLAGRATLDGRRVDLIGVSGRAFVGVDEALWLSARVLETVRRGGGTPILVLLDSGSQRMSK RDELLGLNECLSHLAKTLMLASGRGHATVGLLYGGTAAGAFIATALATRVLLALPGAEPAVMDLPSMARVTKLPLEVLEE KAKSTAVFAPGLANLEQTGAVDAVLDPGQALAAQLARWLAEPAARADGRDRLGEARGGRPAAARIAQRVHALARAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24766; Mature: 24635
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDDILASFDHDVSRRDDGLLAGRATLDGRRVDLIGVSGRAFVGVDEALWLSARVLETV CCHHHHHHHHCCCCCCCCCCEEECCEECCCCEEEEEECCCCEEECCHHHHHHHHHHHHHH RRGGGTPILVLLDSGSQRMSKRDELLGLNECLSHLAKTLMLASGRGHATVGLLYGGTAAG HHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHH AFIATALATRVLLALPGAEPAVMDLPSMARVTKLPLEVLEEKAKSTAVFAPGLANLEQTG HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHC AVDAVLDPGQALAAQLARWLAEPAARADGRDRLGEARGGRPAAARIAQRVHALARAAG CCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLDDILASFDHDVSRRDDGLLAGRATLDGRRVDLIGVSGRAFVGVDEALWLSARVLETV CHHHHHHHHCCCCCCCCCCEEECCEECCCCEEEEEECCCCEEECCHHHHHHHHHHHHHH RRGGGTPILVLLDSGSQRMSKRDELLGLNECLSHLAKTLMLASGRGHATVGLLYGGTAAG HHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHH AFIATALATRVLLALPGAEPAVMDLPSMARVTKLPLEVLEEKAKSTAVFAPGLANLEQTG HHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHC AVDAVLDPGQALAAQLARWLAEPAARADGRDRLGEARGGRPAAARIAQRVHALARAAG CCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA