| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026758
Identifier: 238026758
GI number: 238026758
Start: 1226253
End: 1227899
Strand: Direct
Name: 238026758
Synonym: bglu_1g11160
Alternate gene names: NA
Gene position: 1226253-1227899 (Clockwise)
Preceding gene: 238026756
Following gene: 238026759
Centisome position: 31.39
GC content: 71.28
Gene sequence:
>1647_bases ATGACGGGATGGAATCATGCGCGGCAAGCGCGCGACGCGCGCCTCGCGGCGGGCGCGCCTCTCGCGCGCGGCAAGCGGGT GGCGGCCGGCGACGCGACGACACTGCTCGAGGCGGTGCTGCGCCCCGGGGACCGCGTCTGCCTGGAGGGCGACAACCAGA AGCAGGCGGACCTGCTCGCCGCGGCGCTTGCCGAGGTCGACAGCGCGAAGATCCACGACCTGCACATGGTGCAGTCCGGC ATCGTGCTGCCCGAGCACCTCGACGTGTTCGAGCGCGGCATCGCGAGGCGCCTCGACTACGCCTATTCCGGCCCGCAGTC GCAGCGCATCGCGAAGCTGCTGTTCGGCGGCCGCATCGAGCTGGGCGCCGTCCACACCTACCTGGAGCTGTTCGCGCGCT ACTTCATCGACCTGACGCCGCAGGTCGCGCTGATCGCGGCGGTCAGCGCCGATGCCGACGGCAACCTCTACACCGGCCCG AACACCGAGGACACGCCCACCGTGGTCGAGGCCACCGCGTTCAAGGACGGCATCGTGATCGCGCAGGTCGACCGCATCGT CGAGCGCGTGCCGCGCGTGGACATCCCGGGCGACCGCGTGCATTTCGTGGTCGAGGCGGGCCGGCCGTTCTTCGTCGAGC CGCTCTTCACGCGCGACCCCGCCGCGATCACCGAAACCCAGATCCTCACCGCGATGCTCGCGATCAAGGGCATCTACGAA CCCTACGGCGTGCGCCGCCTGAACCACGGCATCGGCTTCAACACGGCCGCCATCGAGCTGCTGCTGCCCACCTACGGCGC GCGCCTCGGCCTGAAGGGCAAGGTCTGCACGCACTGGGCGCTGAATCCGCATCCCACGCTGATCCCGGCCATCGAGTCGG GCTGGGTCGAGCAGGTGCACTGCTTCGGCTCCGAGGTGGGCATGGACGAGTACATCCGCGCGCGCCCCGACGTGTTCTTC ACGGGCGCCGACGGCTCGCTGCGCTCGAATCGCGCGTTCTGCCAGACGGCCGGGCTCTACGGCTGCGACATGTTCATCGG CTCGACGCTGCAGATCGACCTGGCCGGCCATTCGTCGACCGTCACCGAGAGCCGCATCGCCGGCTTCGGCGGCGCGCCGA ACATGGGCAGCGACGCGCGCGGCCGGCGCCACCCGAGCCAGCCGTGGCTGAAGGCCGGCGAGGAGGCCGATCCGGCCACG CCGGCGGCGCTGCGGCGCGGCCGCAAGCTGGTGGTGCAGATCGGCGAGACCTTCGGCGAGAAGAACGTGCCGATGTTCGT CGAGCGGCTCGACGCGCTGCGCCTGGCCGACAAGCTTGCGCTCGATCTCGCGCCGGTGATGGTGTATGGCGACGACGTCA CGCACGTGGTCACCGAGGAAGGCATCGCGAACCTGCTGCTGTGCCGCGACGCCGACGAGCGCGAGCACGCGATCCGCGGC GTGGCGGGCTACACCGCGGTGGGCCGCGGCCGCGACCGGCGGCTCGTCGAACGGCTGCGCGAGCGCGGCGTGATCCGCCG CCCCGAGGATCTCGGCATCGATCCGCTCGACGCGGACCGGCGGCTGCTGGCCGCGCGCTCGGTGAAGGATCTCGTGCATT GGTCGGGCGGGCTCTACGCGCCGCCGTCGCGCTTTCGGAACTGGTAA
Upstream 100 bases:
>100_bases GCCTCTGAGTGACATTGGGCAACATCATCAATGGCGGGCGTGGTGCGGCTTAGAATCGTGCCACGACCTGATACCGGACA CGCATCGCAGGAGAGAGGCA
Downstream 100 bases:
>100_bases CGGCACCGCGCGACGCGGCTGGCGGCACGCACCGCGTCGCATGACAACCCGCGGCCCCGCGCGCATGCGCGAACGGCCGA GGACGGAGGGATCGAATGGA
Product: malonate decarboxylase subunit alpha
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MTGWNHARQARDARLAAGAPLARGKRVAAGDATTLLEAVLRPGDRVCLEGDNQKQADLLAAALAEVDSAKIHDLHMVQSG IVLPEHLDVFERGIARRLDYAYSGPQSQRIAKLLFGGRIELGAVHTYLELFARYFIDLTPQVALIAAVSADADGNLYTGP NTEDTPTVVEATAFKDGIVIAQVDRIVERVPRVDIPGDRVHFVVEAGRPFFVEPLFTRDPAAITETQILTAMLAIKGIYE PYGVRRLNHGIGFNTAAIELLLPTYGARLGLKGKVCTHWALNPHPTLIPAIESGWVEQVHCFGSEVGMDEYIRARPDVFF TGADGSLRSNRAFCQTAGLYGCDMFIGSTLQIDLAGHSSTVTESRIAGFGGAPNMGSDARGRRHPSQPWLKAGEEADPAT PAALRRGRKLVVQIGETFGEKNVPMFVERLDALRLADKLALDLAPVMVYGDDVTHVVTEEGIANLLLCRDADEREHAIRG VAGYTAVGRGRDRRLVERLRERGVIRRPEDLGIDPLDADRRLLAARSVKDLVHWSGGLYAPPSRFRNW
Sequences:
>Translated_548_residues MTGWNHARQARDARLAAGAPLARGKRVAAGDATTLLEAVLRPGDRVCLEGDNQKQADLLAAALAEVDSAKIHDLHMVQSG IVLPEHLDVFERGIARRLDYAYSGPQSQRIAKLLFGGRIELGAVHTYLELFARYFIDLTPQVALIAAVSADADGNLYTGP NTEDTPTVVEATAFKDGIVIAQVDRIVERVPRVDIPGDRVHFVVEAGRPFFVEPLFTRDPAAITETQILTAMLAIKGIYE PYGVRRLNHGIGFNTAAIELLLPTYGARLGLKGKVCTHWALNPHPTLIPAIESGWVEQVHCFGSEVGMDEYIRARPDVFF TGADGSLRSNRAFCQTAGLYGCDMFIGSTLQIDLAGHSSTVTESRIAGFGGAPNMGSDARGRRHPSQPWLKAGEEADPAT PAALRRGRKLVVQIGETFGEKNVPMFVERLDALRLADKLALDLAPVMVYGDDVTHVVTEEGIANLLLCRDADEREHAIRG VAGYTAVGRGRDRRLVERLRERGVIRRPEDLGIDPLDADRRLLAARSVKDLVHWSGGLYAPPSRFRNW >Mature_547_residues TGWNHARQARDARLAAGAPLARGKRVAAGDATTLLEAVLRPGDRVCLEGDNQKQADLLAAALAEVDSAKIHDLHMVQSGI VLPEHLDVFERGIARRLDYAYSGPQSQRIAKLLFGGRIELGAVHTYLELFARYFIDLTPQVALIAAVSADADGNLYTGPN TEDTPTVVEATAFKDGIVIAQVDRIVERVPRVDIPGDRVHFVVEAGRPFFVEPLFTRDPAAITETQILTAMLAIKGIYEP YGVRRLNHGIGFNTAAIELLLPTYGARLGLKGKVCTHWALNPHPTLIPAIESGWVEQVHCFGSEVGMDEYIRARPDVFFT GADGSLRSNRAFCQTAGLYGCDMFIGSTLQIDLAGHSSTVTESRIAGFGGAPNMGSDARGRRHPSQPWLKAGEEADPATP AALRRGRKLVVQIGETFGEKNVPMFVERLDALRLADKLALDLAPVMVYGDDVTHVVTEEGIANLLLCRDADEREHAIRGV AGYTAVGRGRDRRLVERLRERGVIRRPEDLGIDPLDADRRLLAARSVKDLVHWSGGLYAPPSRFRNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59876; Mature: 59745
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWNHARQARDARLAAGAPLARGKRVAAGDATTLLEAVLRPGDRVCLEGDNQKQADLLA CCCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHH AALAEVDSAKIHDLHMVQSGIVLPEHLDVFERGIARRLDYAYSGPQSQRIAKLLFGGRIE HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEE LGAVHTYLELFARYFIDLTPQVALIAAVSADADGNLYTGPNTEDTPTVVEATAFKDGIVI EHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCEEH AQVDRIVERVPRVDIPGDRVHFVVEAGRPFFVEPLFTRDPAAITETQILTAMLAIKGIYE HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC PYGVRRLNHGIGFNTAAIELLLPTYGARLGLKGKVCTHWALNPHPTLIPAIESGWVEQVH CHHHHHHHCCCCCCHHHHEEEHHCCCCCCCCCCCEEEEECCCCCCCEEECHHCCHHHHHH CFGSEVGMDEYIRARPDVFFTGADGSLRSNRAFCQTAGLYGCDMFIGSTLQIDLAGHSST HHHCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCEEHHHHCCEEEEEECCCCCH VTESRIAGFGGAPNMGSDARGRRHPSQPWLKAGEEADPATPAALRRGRKLVVQIGETFGE HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC KNVPMFVERLDALRLADKLALDLAPVMVYGDDVTHVVTEEGIANLLLCRDADEREHAIRG CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCHHEEEEECCCCHHHHHHHH VAGYTAVGRGRDRRLVERLRERGVIRRPEDLGIDPLDADRRLLAARSVKDLVHWSGGLYA HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PPSRFRNW CHHHHCCC >Mature Secondary Structure TGWNHARQARDARLAAGAPLARGKRVAAGDATTLLEAVLRPGDRVCLEGDNQKQADLLA CCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHH AALAEVDSAKIHDLHMVQSGIVLPEHLDVFERGIARRLDYAYSGPQSQRIAKLLFGGRIE HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEE LGAVHTYLELFARYFIDLTPQVALIAAVSADADGNLYTGPNTEDTPTVVEATAFKDGIVI EHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCEEH AQVDRIVERVPRVDIPGDRVHFVVEAGRPFFVEPLFTRDPAAITETQILTAMLAIKGIYE HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC PYGVRRLNHGIGFNTAAIELLLPTYGARLGLKGKVCTHWALNPHPTLIPAIESGWVEQVH CHHHHHHHCCCCCCHHHHEEEHHCCCCCCCCCCCEEEEECCCCCCCEEECHHCCHHHHHH CFGSEVGMDEYIRARPDVFFTGADGSLRSNRAFCQTAGLYGCDMFIGSTLQIDLAGHSST HHHCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHCCCCEEHHHHCCEEEEEECCCCCH VTESRIAGFGGAPNMGSDARGRRHPSQPWLKAGEEADPATPAALRRGRKLVVQIGETFGE HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCEEEEEEHHHCCC KNVPMFVERLDALRLADKLALDLAPVMVYGDDVTHVVTEEGIANLLLCRDADEREHAIRG CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCHHEEEEECCCCHHHHHHHH VAGYTAVGRGRDRRLVERLRERGVIRRPEDLGIDPLDADRRLLAARSVKDLVHWSGGLYA HHHHHHHCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PPSRFRNW CHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA