| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026697
Identifier: 238026697
GI number: 238026697
Start: 1151478
End: 1152431
Strand: Direct
Name: 238026697
Synonym: bglu_1g10540
Alternate gene names: NA
Gene position: 1151478-1152431 (Clockwise)
Preceding gene: 238026689
Following gene: 238026702
Centisome position: 29.48
GC content: 64.57
Gene sequence:
>954_bases ATGCGTAGGCGCCTCGGACTCACGGCGCTCGCGCTGCTCGTCGCATCGTGCGCGGCGGGCTACGGCTGGCACATGACGAC CGCTTCGATGGCTCGCAACGGAACCTCGACCATGCAACCTGATTTGATCTTCGGCATCGGCGACAACGGCGACCAGGTTG CCCGCACGGCGCGGGTCCCCGTTAAGCGCTCGCAGCTCTCCACCGCCTTGATGTACGACGCGAGCCGGATCGCGACCGGC GCCGAGCCCGTATTCGAGTTCCGCGATGCGCGGCACCGGATGCTGTTGCCGCAGGCTACGGATGTCGAATTCATGTCGGA CACCGATGAGGGTGGCGGGATTCGCACCATTCACGTTGTGTTCAAGGTGCCGGTCTCGCCGACCGACGTCCATGACACGG CCGCATTCGAGGCCTACGACCGGGCGATGTACGGCTACGTGACTGGCGTGCTGCAGGTAATCCGGCAGGCTGGCTGGAAG CGCTATATTCCGTTGTCGTCGCCGCGACTCGAAGGCAGGCGAACCTATTCCTTCACGCCCGATAGCTACGCCGGGCCGAC CTATGCCACCTCGCCGTCGCTGGCGCAGGCCGATCCAGATTACGCCCTGACGTTCGAGGATTGGCGGCATCTGTCGCGCG GTGGCACGACGCTTTGGCAGTGGTATGCAGACGGCAAATTCGTCGATTTGAAATACGAGCGCGACGAGCGATCCGCCGAG CTGCCGATCACGCTCGGTGATCAGCTTGATTTACGGATCCGTTCGGAAGCTGCCTGGCTCGATACGTTCGGTCCCACCTA CGAAGCGGCCCGGGCCAGATACGCGAGCGAAGTCGCTGCCCTGCTCCAGCAGCGGCACGCGGCCGAGGTGAAGGCGCAGG CTGCCGGCGCGCGCATTCTCCGTGACTGGACCGATCCAATCATTGCCGGCGTGGCGGTGCCCAAGAGCAGATGA
Upstream 100 bases:
>100_bases TACGTGAAGAAGATTCTCGACAAGTACCACGCCCTGATGTCTAGCCAGCGATACCGGCCATACATGATTCAGCAGATTTC CACGATCGCGGGCTGGAAGG
Downstream 100 bases:
>100_bases CGGCGGCAGCCAGGTCAAGCTGAGCGACATAAATAAGGCGCCGGCCGCGCGCTCACTCGCGCCTCGCCCCCGGCGCCGGC CGCCCCGCCCAATAGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRRRLGLTALALLVASCAAGYGWHMTTASMARNGTSTMQPDLIFGIGDNGDQVARTARVPVKRSQLSTALMYDASRIATG AEPVFEFRDARHRMLLPQATDVEFMSDTDEGGGIRTIHVVFKVPVSPTDVHDTAAFEAYDRAMYGYVTGVLQVIRQAGWK RYIPLSSPRLEGRRTYSFTPDSYAGPTYATSPSLAQADPDYALTFEDWRHLSRGGTTLWQWYADGKFVDLKYERDERSAE LPITLGDQLDLRIRSEAAWLDTFGPTYEAARARYASEVAALLQQRHAAEVKAQAAGARILRDWTDPIIAGVAVPKSR
Sequences:
>Translated_317_residues MRRRLGLTALALLVASCAAGYGWHMTTASMARNGTSTMQPDLIFGIGDNGDQVARTARVPVKRSQLSTALMYDASRIATG AEPVFEFRDARHRMLLPQATDVEFMSDTDEGGGIRTIHVVFKVPVSPTDVHDTAAFEAYDRAMYGYVTGVLQVIRQAGWK RYIPLSSPRLEGRRTYSFTPDSYAGPTYATSPSLAQADPDYALTFEDWRHLSRGGTTLWQWYADGKFVDLKYERDERSAE LPITLGDQLDLRIRSEAAWLDTFGPTYEAARARYASEVAALLQQRHAAEVKAQAAGARILRDWTDPIIAGVAVPKSR >Mature_317_residues MRRRLGLTALALLVASCAAGYGWHMTTASMARNGTSTMQPDLIFGIGDNGDQVARTARVPVKRSQLSTALMYDASRIATG AEPVFEFRDARHRMLLPQATDVEFMSDTDEGGGIRTIHVVFKVPVSPTDVHDTAAFEAYDRAMYGYVTGVLQVIRQAGWK RYIPLSSPRLEGRRTYSFTPDSYAGPTYATSPSLAQADPDYALTFEDWRHLSRGGTTLWQWYADGKFVDLKYERDERSAE LPITLGDQLDLRIRSEAAWLDTFGPTYEAARARYASEVAALLQQRHAAEVKAQAAGARILRDWTDPIIAGVAVPKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35145; Mature: 35145
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLGLTALALLVASCAAGYGWHMTTASMARNGTSTMQPDLIFGIGDNGDQVARTARVP CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCC VKRSQLSTALMYDASRIATGAEPVFEFRDARHRMLLPQATDVEFMSDTDEGGGIRTIHVV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHEECCCCCCCEEECCCCCCCCEEEEEEE FKVPVSPTDVHDTAAFEAYDRAMYGYVTGVLQVIRQAGWKRYIPLSSPRLEGRRTYSFTP EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECC DSYAGPTYATSPSLAQADPDYALTFEDWRHLSRGGTTLWQWYADGKFVDLKYERDERSAE CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCC LPITLGDQLDLRIRSEAAWLDTFGPTYEAARARYASEVAALLQQRHAAEVKAQAAGARIL CCEEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDWTDPIIAGVAVPKSR HHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRRLGLTALALLVASCAAGYGWHMTTASMARNGTSTMQPDLIFGIGDNGDQVARTARVP CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCC VKRSQLSTALMYDASRIATGAEPVFEFRDARHRMLLPQATDVEFMSDTDEGGGIRTIHVV CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHEECCCCCCCEEECCCCCCCCEEEEEEE FKVPVSPTDVHDTAAFEAYDRAMYGYVTGVLQVIRQAGWKRYIPLSSPRLEGRRTYSFTP EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECC DSYAGPTYATSPSLAQADPDYALTFEDWRHLSRGGTTLWQWYADGKFVDLKYERDERSAE CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCC LPITLGDQLDLRIRSEAAWLDTFGPTYEAARARYASEVAALLQQRHAAEVKAQAAGARIL CCEEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDWTDPIIAGVAVPKSR HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA